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David Broadhurst

@davidbroadhurst.bsky.social
577 followers 211 following 61 posts

Professor of Metabolomic Epidemiology & Biosystems Data Science @ Edith Cowan University, Perth Western Australia. Honorary Fellow of the Metabolomics Society. Also …Road cyclist 🚴 Coffee Snob ☕️ Sound Designer 🎹 Reader of books 📚

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David Broadhurst @davidbroadhurst.bsky.social · 14/08/2025
Version 2.1 of the QC:MXP repeat-injection derived batch correction app is now available to download at qcmxp.org. I thought it would be fun to revisit an old data set from Craig Wheelock's lab - doi.org/10.1183/1399.... 16 batch, 880 subjects, 224 pooled QC injections, 100+ curated metabolites.
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Lorenzo Lorenzo-Luaces, PhD @lluaces.bsky.social · 15/07/2025
For the love of god put the sample size in the abstract
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James MacRae @jamesmacraedonkey.bsky.social · 07/05/2025
🚨 📢 I’m #hiring!!! I am looking for an experienced #metabolomics scientist with a particular focus on LC-MS. Please follow the link below for more details and how to apply! 📢 🚨 Applications close at 23:59 on May 23rd!!! www.crick.ac.uk/careers-stud...
crick.ac.uk
Senior/Principal Laboratory Research Scientist: Metabolomics & Lipidomics Specialist
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Nicholas Rattray @nikrat.bsky.social · 23/04/2025
Happy to share our recent opinon piece on how the cross section of ageing, metabolism and palaeoanthropolgy research areas hold promise is uncovering novel routes in human evolution. authors.elsevier.com/a/1k%7E4KArD...
authors.elsevier.com
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Dr Katherine Duncan @kateduncan.bsky.social · 23/04/2025
Save the date: the 5th anniversary of the Glasgow Computational Biology Conference. 15th and 16th of September at University of Glasgow Advanced Research Centre. Details to follow soon! glasgow-compbio.github.io/conference/2...
glasgow-compbio.github.io
Glasgow University Computational Biology Conference 2025 – Glasgow CompBio Community
Take part in talks, networking and learning about everything computational biology!
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David Broadhurst @davidbroadhurst.bsky.social · 17/04/2025
QC:MXP version 2.0 is now available to download for free from my GitHub page: www.qcmxp.org Repeat-injection-based Quality Control, Batch Correction, Exploration & Data Cleaning. #Metabolomics #AnalyticalChemistry #Matlab
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Johannes Rainer @jorainer.bsky.social · 18/04/2025
Updates in 🦕 #xcms #rstats #metabolomics package: 👉 retention time alignment against external data set 👉 chromatographic peak quality metrics 👉 performance improvements Available in @bioconductor.bsky.social release 3.21 🚀 Up next: memory-saving analysis of very large data sets 😎 #TeamMassSpec
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David Broadhurst @davidbroadhurst.bsky.social · 17/04/2025
QC:MXP version 2.0 is now available to download for free from my GitHub page: www.qcmxp.org Repeat-injection-based Quality Control, Batch Correction, Exploration & Data Cleaning. #Metabolomics #AnalyticalChemistry #Matlab
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Johannes Rainer @jorainer.bsky.social · 11/04/2025
And big thanks also to the @eubic-ms.org hackathon team contributing to our #SpectriPy package github.com/RforMassSpec... ! Next on the list submission of the package to 👉 @bioconductor.bsky.social
github.com
GitHub - rformassspectrometry/SpectriPy: Interfacing R's Spectra package with the Python world.
Interfacing R's Spectra package with the Python world. - rformassspectrometry/SpectriPy
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David Broadhurst @davidbroadhurst.bsky.social · 20/02/2025
Wonderful to see this Nature Communications perspective paper from Dr. Kevin Mendez's PhD finally out. Part of great collaboration between metabolomic epidemiology researchers at Edith Cowan University & Harvard Medical School. www.nature.com/articles/s41...
nature.com
A roadmap to precision medicine through post-genomic electronic medical records - Nature Communications
The authors outline a framework uniting electronic medical records with post-genomic data to capture real-time physiological changes via periodic molecular snapshots, enabling a shift from reactive tr...
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EMN Metabolomics Society @emn-metsoc.bsky.social · 17/02/2025
🚨 Abstract deadline alert! 🚨 Friendly reminder to submit your oral abstract before March 6 – don’t miss the chance to showcase your work at hashtag#MetSoc2025! Registration is now open: lnkd.in/eFZGi4CK #Metabolomics #EMN
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Tomáš Pluskal @pluskal-lab.org · 17/02/2025
We will be hosting the first @mzmine.bsky.social Community Meeting at @iocbprague.bsky.social. Please register if you wish to learn about the latest developments in mzmine. More info: docs.google.com/document/d/1...
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Natasa Giallourou @natasag.bsky.social · 18/02/2025
🚨 Call for abstracts! 🚨 Submit your abstract for #MetSoc2025 in Prague - submissions close March 6! Don't miss the chance to showcase your work at the biggest event in #metabolomics. www.metabolomics2025.org
metabolomics2025.org
Home - Metabolomics 2025
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Nicola Rennie @nrennie.bsky.social · 16/02/2025
I'm really looking forward to running this "Git and GitHub for R Users" workshop for @r-ladies-stl.bsky.social! 📅 April 23rd 2025 ⏰ 11am CST / 5pm BST 📍 Online Register: www.meetup.com/rladies-st-l... #RStats #Git #GitHub #RLadies
meetup.com
Git and GitHub for R Users, Wed, Apr 23, 2025, 11:00 AM | Meetup
In this workshop, attendees will learn how to use GitHub in conjunction with RStudio. Contents * Understand why version control is necessary and useful. * Be able to coll
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Females in Mass Spectrometry (FeMS+) @femalesinms.bsky.social · 10/02/2025
Applications are open for the #FeMS+ 2025 Q2 Empowerment Awards! Thanks @brukercorporation.bsky.social for sponsoring! Apply here: airtable.com/appyGufCIumj... #TeamMAssSpec #WomenEmpowerment
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EMN Metabolomics Society @emn-metsoc.bsky.social · 07/02/2025
🏆EMN Travel Awards are back for #MetSoc2025 in Prague! EMN Travel Award – Up to 4 grants for graduate (Master’s/PhD) & postdocs. 📍More info: metabolomics2025.org/awards #Metabolomics #EMN
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Prof Danny Altmann @daltmann.bsky.social · 04/02/2025
@tomgauld.bsky.social - I thought this was terrific!
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Douglas Kell @dbkell.bsky.social · 31/01/2025
Pleased to say that the follow-up paper w @resiapretorius on the proteomics of amyloidogenesis in microclot formation preprinted at www.biorxiv.org/content/10.1... has just been accepted. #TeamClots
biorxiv.org
The proteome content of blood clots observed under different conditions: successful role in predicting clot amyloid(ogenicity)
A recent analysis compared the proteome of (i) blood clots seen in two diseases – sepsis and long COVID – when blood was known to have clotted into an amyloid microclot form (as judged by staining wit...
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Wolfgang Huber @wkhuber.bsky.social · 31/01/2025
Come work at the European Molecular Biology Laboratory in the beautiful science & university city Heidelberg as a Research Software Engineer on R/Bioconductor tools for biological data science and AI ! embl.wd103.myworkdayjobs.com/EMBL/job/Hei...
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Cristina Legido-Quigley @legidoquigley.bsky.social · 31/01/2025
I did a list of #WomeinSTEM working in #metabolomics & #lipidomics and #datascience please join or share with others, use it for conferences, media & networking, mentoring, supporting, anything that helps, 300+ women have joined docs.google.com/document/u/0...
docs.google.com
LIST “WOMEN IN METABOLOMICS, LIPIDOMICS, PROTEOMICS AND RELATED DATA SCIENCE”
NAME INSTITUTION COUNTRY Dr. Maria Eugenia Monge CIBION-CONICET Argentina Prof. Elaine Holmes Murdoch University- Imperial College London Australia- UK Dr Ruey-Leng Loo Murdoch University, Au...
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metaspace2020.bsky.social @metaspace2020.bsky.social · 30/01/2025
Ready to take your metabolite annotation to the next level? Join our first FREE webinar on Best Practices for Metabolite Annotation in Imaging MS with METASPACE! 🔗 Register now: eventbrite.com/e/best-pract... #Metabolomics #MassSpec #Imaging #METASPACE
eventbrite.com
Best Practices for Metabolite Annotation in Imaging MS with METASPACE
Learn the top tips and tricks for identifying metabolites in Imaging MS using METASPACE - the ultimate guide for metabolite annotation!
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Christian Frezza @frezzalab.bsky.social · 23/01/2025
Hi all, our lab will soon recruit a PhD student working within a very exciting MSCA Horizon Doctoral network working on ageing, UNION, which gathers some fantastic scientists. Please apply if your profile fits our project (see attached advert). Looking forward to working with you!
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Dr. Ahna Skop @ahnaskop.bsky.social · 22/01/2025
“Two researchers, one with bipolar disorder and ADHD, the other with autism, discuss supportive workplaces, building networks, and how and when to disclose diagnoses.”
nature.com
How to be a brilliant ally to your neurodivergent lab mate
Two researchers, one with bipolar disorder and ADHD, the other with autism, discuss supportive workplaces, building networks, and how and when to disclose diagnoses.
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David Broadhurst @davidbroadhurst.bsky.social · 21/01/2025
So happy to see (listen) to Phil Liggett commentating on the Tour Down Under (Channel 7). I started watching TdF under his guidance back in the 1980’s on C4 UK. He is a legend. Great stuff!
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Randall Munroe @xkcd.com · 21/01/2025
Chemical Formulas xkcd.com/3040
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David Broadhurst @davidbroadhurst.bsky.social · 20/01/2025
It is going to be fun cycling home today. 🔆🚴‍♂️🥵
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Tim Ebbels @tebbels.bsky.social · 15/01/2025
Calling computational #metabolomics people out there! Are you interested in working with #EU colleagues to analyse and model metabolomic data? We are looking for an enthusiastic and knowledgeable individual to join the #BiACEM project: www.imperial.ac.uk/jobs/search-...
imperial.ac.uk
Home
Imperial College London is a world-leading university for science, technology, engineering, medicine and business (STEMB). Across our London campuses, and throughout our international network, we use ...
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David Broadhurst @davidbroadhurst.bsky.social · 14/01/2025
The Metabolomics starter pack has passed 100 members. I do add people who follow me based on whether“metabolomics” is mentioned in your biography (or I know you personally). If you want to be added (or removed) let me know. Can I encourage people to actually write a biography. 🤦 go.bsky.app/J3VPYKm
go.bsky.app
Metabolomics
Join the conversation
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David Broadhurst @davidbroadhurst.bsky.social · 14/01/2025
Age yourself with your first computer.
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Mike Croucher @walkingrandomly.bsky.social · 13/01/2025
If you have half an hour or so and want to learn something new, give the new MATLAB Coder OnRamp a try. Generate C and C++ code from MATLAB code. Used hugely in industry for getting code into production. matlabacademy.mathworks.com/details/matl...
matlabacademy.mathworks.com
MATLAB Coder Onramp | Self-Paced Online Courses - MATLAB & Simulink
Learn the basics of C and C++ code generation from MATLAB functions. You will learn the code generation workflow, including how to fix common compatibility issues and how to use MEX functions to call ...
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Andy Tseng @andytseng.bsky.social · 07/01/2025
Thrilled to share I’m joining the Whitehead Institute at #MIT as Director of IT & Digital Strategy! After 14 incredible years at #UniMelb, I’m excited to continue supporting world-class researchers, advance groundbreaking science, and start a new chapter in Boston! #Leadership #ResearchSky
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David Broadhurst @davidbroadhurst.bsky.social · 03/01/2025
First ride of 2025. 33km Lake Joondalup loop.
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David Broadhurst @davidbroadhurst.bsky.social · 31/12/2024
Last ride of the year pushing me just over 3,000km for 2024 on the “new” bike. Not bad all things considered. I will be very happy if I can do the same in 2025.
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Politics News @politicsnewsusa.bsky.social · 10/12/2024
BREAKING: Australia has introduced a new bill that will limit the total spending on a party by billionaires like Elon Musk to Just $20,000 This will ban billionaires from single-handedly buying Elections in Australia.
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Paolo Crosetto @paolocrosetto.bsky.social · 20/12/2024
I was today years old when I found this gem of a web app to explore 2500+ color palettes for R: r-graph-gallery.com/color-palett...
r-graph-gallery.com
R Color Palette Finder
The ultimate tool for finding the perfect color palette for data visualization with R and paletteer. Explore over 2000 palettes, see them in action on various charts, simulate color blindness, and exp...
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David Broadhurst @davidbroadhurst.bsky.social · 19/12/2024
Nice!
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Matej Oresic @matejoresic.bsky.social · 18/12/2024
Deadline extended to January 7th. New #postdoc / senior researcher position in our team at Turku #Metabolomics Centre (@BioscienceTurku / @UniTurku), in #massspectrometry #imaging. #MSimaging #lipidomics #proteomics
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Tobias Warnecke @tobiaswarnecke.bsky.social · 16/12/2024
Please RT: Associate Professor position in my department at the University of Oxford. Broad search in molecular and cellular biology: my.corehr.com/pls/uoxrecru...
my.corehr.com
Job Details
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David Broadhurst @davidbroadhurst.bsky.social · 16/12/2024
Back in Perth. Sunshine ☀️ & superb Aussie coffee. Thanks to all the lovely people who made my trip to the UK so special. Especially all the early career researchers to took the time to talk to me about my & their work during #metabomeeting2024. Great to see the future of metabolomics in safe hands.
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Arvind Narayanan @randomwalker.bsky.social · 24/09/2024
AI Snake Oil is out today! The book has been five years in the making. The first chapter is online. It is 30 pages long and summarizes the book’s main arguments. We're grateful for all the early interest and support. Let us know what you think of the book! www.aisnakeoil.com/p/starting-r...
INTRODUCTION

Imagine an alternate universe in which people don’t have words for different forms of transportation—only the collective noun “vehicle.” They use that word to refer to cars, buses, bikes, spacecraft, and all other ways of getting from place A to place B. Conversations in this world are confusing. There are furious debates about whether or not vehicles are environmentally friendly, even though no one realizes that one side of the debate is talking about bikes and the other side is talking about trucks. There is a breakthrough in rocketry, but the media focuses on how vehicles have gotten faster—so people call their car dealer (oops, vehicle dealer) to ask when faster models will be available. Meanwhile, fraudsters have capitalized on the fact that consumers don’t know what to believe when it comes to vehicle technology, so scams are rampant in the vehicle sector.

Now replace the word “vehicle” with “artificial intelligence,” and we have a pretty good description of the
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Nicole Kearney @nicolekearney.bsky.social · 14/12/2024
Hi Bluesky, I’m Nicole, Manager of the Australian branch of the Biodiversity Heritage Library @bhl-au.bsky.social, the world’s largest online repository of biodiversity literature. I work with museums, herbaria & libraries to make their collections openly accessible, discoverable & connected. 1/3
An historic illustration of 3 fairy wrensAn historic illustration of a black and white possum in a treeA historic book on a book scanner, open to a page showing historic illustrations of 5 colourful parrotsA woman standing in front of a bookshelf filled with historic bound journals
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Cristina Legido-Quigley @legidoquigley.bsky.social · 13/12/2024
News feature by Jessica Shugart in the best forum for #Alzheimer's research. It explains work by Carlos Cruchaga's team & cols, it discovers genes relationships to molecules in CSF & brain. I did a drawing for it, mega #omics www.alzforum.org/news/researc...
alzforum.org
‘MGWAS’ Ties Brain Metabolites to Alzheimer’s, Parkinson’s, More | ALZFORUM
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David Broadhurst @davidbroadhurst.bsky.social · 11/12/2024
Why does anyone think it is a good idea to submit a paper for review just before Christmas? Yet every year ...
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Tim Ebbels @tebbels.bsky.social · 10/12/2024
We're hiring! Are you a #metabolomics scientist interested in working with #EU colleagues to analyse and model metabolomic data? We are looking for an enthusiastic and knowledgeable individual to join the #BiACEM project: www.imperial.ac.uk/jobs/search-...
imperial.ac.uk
Description
Please note that job descriptions are not exhaustive, and you may be asked to take on additional duties that align with the key responsibilities ment...
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Marc-Emmanuel Dumas @marcedumas.bsky.social · 07/12/2024
We’re hiring! UHPLC-HRMS metabolomics to investigate the microbiome-metabolite-immune axis in the transition from health to disease with the IMMEDIATE consortium. Deadline 10th Jan: www.imperial.ac.uk/jobs/search-...
imperial.ac.uk
Description
Please note that job descriptions are not exhaustive, and you may be asked to take on additional duties that align with the key responsibilities ment...
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David Broadhurst @davidbroadhurst.bsky.social · 04/12/2024
After 20 days in UK I finally found a decent cup of coffee. At the Rapha London clubhouse #AustralianCoffeeSnob
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Pieter Dorrestein @pieterdorrestein.bsky.social · 03/12/2024
The CMMC is hosting a reverse metabolomics workshop. The foundation of these papers www.nature.com/articles/s41..., www.cell.com/cell/fulltex... and www.biorxiv.org/content/10.1... - here searched @gnps2.bsky.social only now @metabolights.bsky.social and @metabolomics workbench as well. #metabolome
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David Broadhurst @davidbroadhurst.bsky.social · 03/12/2024
For connoisseurs of inter-city UK train travel. First class on the TransPennine Express (Manchester <-> Glasgow) is ten times better than First Class on Avanti West (Glasgow <-> London) @tpexpress.bsky.social
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David Broadhurst @davidbroadhurst.bsky.social · 02/12/2024
THe #metabolomics starter pack is now up to 75 members. Again, if you would like to be added let me know. Equally if I have put you on the list by mistake let me know. go.bsky.app/J3VPYKm
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