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Jyot Antani

@antanij.bsky.social
1.2K followers 818 following 61 posts

antanij.netlify.app Microscopy of bacteria and their viruses. Scientist @yale.edu @paulturnerlab.bsky.social. Phage researcher, biotech enthusiast. Research Facilitator @omibs-mbl.bsky.social

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Jyot Antani @antanij.bsky.social · 16/09/2026
Yesterday I was on Capitol Hill with fellow members of @asm.org. We met with members of Congress and their staff to emphasize the need for robust federal science funding & to urge withdrawal of the OMB proposed rule on federal financial assistance. #ASMAdvocacy #Science #PublicHealth #SciencePolicy
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Noah Houpt @noahhoupt.bsky.social · 25/08/2026
Thrilled to see this project officially published in ISMEJ! We showed that filamentous prophages frequently acquired repressor mutations causing hyperactivity which, in turn, drove the evolution of phage resistance with pleiotropic consequences. academic.oup.com/ismej/advanc...
academic.oup.com
Mutations in filamentous bacteriophages spark eco-evolutionary feedbacks in Pseudomonas aeruginosa
Abstract. Microbial populations strongly shape their environment, which can re-route adaptation toward organism-generated fitness optima. However, the cond
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Jyot Antani @antanij.bsky.social · 16/07/2026
The preprint was already exciting but this awesome single-virus paper from @joshuasweitz.bsky.social lab is now published in a great journal! phys.org/news/2026-07...
phys.org
Scientists find hidden individuality in viral infections
An international team of researchers developed a new way to uncover hidden differences in how viruses infect and destroy individual microbial cells—solving a biological puzzle that has persisted for m...
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Vaughn Cooper @vscooper.micropopbio.org · 06/06/2026
Now @paulturnerlab.bsky.social on phage therapy
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Jyot Antani @antanij.bsky.social · 03/05/2026
Looking forward to presenting at ASM Microbe 2026! @asm.org Grateful for the opportunity to share our work and learn from so many brilliant researchers in one place. See you in Washington, D.C. #ASMicrobe invt.io/1bxbe1gvcjt
invt.io
Sharing New Research at ASM Microbe 2026
I’ll be presenting at ASM Microbe 2026, showcasing new insights in microbial science. Join us June 4–7 in Washington, D.C.
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Vivek Mutalik @vivekmutalik.bsky.social · 03/04/2026
📣Huge preprint 🔔 Today we share something our group has been working toward for a long time, led by @lucasmoriniere.bsky.social We asked can we predict which receptor a phage targets from its genome sequence alone? For most phages, we couldn’t. So Lucas set out to do something I had only dreamed of.
Phage receptor prediction from genome sequencing alone. Bacterial receptor (blue) interacting with phage proteins (purple) is shown here
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PLOS Biology @plosbiology.org · 02/04/2026
How do #bacteriophage life history strategies influence host invasion & inter- #phage competition in #biofilms? This study shows that spatial structure shapes invasion success, favoring temperate phages over lytic ones when diffusion is limited @plosbiology.org 🧪 plos.io/47Aripq
 λcI857 lytic infections and host lysogenization following induction of lysogens embedded within Escherichia coli biofilms with either WT curli production (curli+) or no curli production (curli−). Host biofilms were inoculated with λcI857 lysogens and uninfected host cells at a 1:10 ratio and cultured for 72 h prior to λcI857 phage induction. The image shows a time series of biofilms inoculated with lysogens and uninfected E. coli hosts that either produce (top row) or do not produce (bottom row) curli extracellular matrix. The first image in each row was taken just after heat was applied to induce some biofilm-embedded lysogens to switch to the lytic infection cycle.
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Jyot Antani @antanij.bsky.social · 04/04/2026
@paulturnerlab.bsky.social and I wrote a perspective on the need and recently developed approaches to study individual virus traits in the most numerous viruses on our planet (phages). Let's move beyond measuring the mean #phagesky www.nature.com/articles/s44... #microsky #virology #microscopy
nature.com
Rage against the mean: a perspective on measuring fitness of individual phage particles - npj Viruses
npj Viruses - Rage against the mean: a perspective on measuring fitness of individual phage particles
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Connecticut Valley Branch ASM @ctvalleyasm.bsky.social · 27/03/2026
Excited for the Connecticut Valley Branch of @asm.org Annual General Meeting 📅 April 24, 2026 📍Brown University (Providence, RI)! Abstracts welcome (some selected for short talks)! Register by April 17: forms.gle/d5XHpdLD1G3S... #Microbiology #ASM #AcademicSky
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Marine Biological Laboratory @mblscience.bsky.social · 28/03/2026
DEADLINE APPROACHING! ⏰ Apply to Optical Microscopy & Imaging in the Biomedical Sciences (OMIBS) by April 1. 🔗 More info here: go.mbl.edu/OMIBS
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Connecticut Valley Branch ASM @ctvalleyasm.bsky.social · 19/03/2026
We are the Connecticut Valley Branch of @asm.org If you are in CT, RI, or parts of NH (zip 03400-03499, 03600-03799) or MA (zip 01000-01699), please join us for: ⭐ Undergraduate Research Opportunities 📊 Scientific Meetings 📶 Networking sites.google.com/view/ctvalle...
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Vivek Mutalik @vivekmutalik.bsky.social · 15/03/2026
New paper 🔔 Collaboration @sullivan-lab.bsky.social Marissa Gittrich led the work Klebsiella phage biology has focused almost entirely on capsulated strains, but capsule loss is the #1 resistance mechanism under phage predation. We used a naturally acapsular host to reveal the receptor landscape
Bacteriophage data on capsular Klebsiella bacteria barcoded library
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Jyot Antani @antanij.bsky.social · 24/02/2026
Yet another awesome single-phage paper from Ido Golding's lab #phagesky www.biorxiv.org/content/10.6...
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Jyot Antani @antanij.bsky.social · 21/02/2026
Who runs the world? PHAGE!! Phage dynamics underlie bacterial reaponses to temperatures in a marine bacterium #phagesky #microsky
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Noah Houpt @noahhoupt.bsky.social · 23/01/2026
Interested in eco-evolutionary feedbacks? Microbial experimental evolution? Pleiotropy? Filamentous phages?? Check out our latest preprint, now up on BioRxiv! biorxiv.org/content/10.6... For a quick summary, peep the thread below...🧵 (1/10)
biorxiv.org
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Simon Roux @simrouxvirus.bsky.social · 03/12/2025
🦠🧪🧬🚨 New paper and database alert: the new IMG/VR release is now MetaVR ! We have a new website - meta-virome.org - with quick search capabilities for the >24M viruses, >12M vOTUs, and >42M protein clusters (including >790k with predicted structures !). academic.oup.com/nar/advance-...
academic.oup.com
Meta-virus resource (MetaVR): expanding the frontiers of viral diversity with 24 million uncultivated virus genomes
Abstract. Viruses are ubiquitous in all environments and impact host metabolism, evolution, and ecology, although our knowledge of their biodiversity is st
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Jyot Antani @antanij.bsky.social · 12/10/2025
Congratulations Nanami! Glad to see this work published!
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Jyot Antani @antanij.bsky.social · 08/10/2025
Yay Cathy!!!
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Mike Blazanin @mikeblazanin.bsky.social · 08/09/2025
Happy to see this paper finally out in @pnas.org! #phage #microbiology #MicroSky #VirEvol 🦠 🧫 🔬 Gift link: www.pnas.org/eprint/YYDZ9...
pnas.org
Quantifying phage infectivity from characteristics of bacterial population dynamics | PNAS
A frequent goal of phage biology is to quantify how well a phage kills a population of host bacteria. Unfortunately, traditional methods to quantif...
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OMIBS @ MBL @omibs-mbl.bsky.social · 12/08/2025
We're gearing up for #OMIBS2025 Getting stuff ready for the participants' arrival. The course kicks off tonight!
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Jyot Antani @antanij.bsky.social · 24/06/2025
Ovaries and stigma of Mimulus plants, stained with Aniline blue. Max Z projections from just widefield fluorescence images! 💙🔬🤩 #microscopy with Henry Arenas-Castro @jenncoughlan.bsky.social lab
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Jyot Antani @antanij.bsky.social · 22/06/2025
Going for the mini plushie at @asm.org #ASMicrobe 🦠🔬
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Jyot Antani @antanij.bsky.social · 21/06/2025
Know Your Worth: Salary Data that Defends Your Value @asm.org ASM Studio #ASMicrobe #ASMicrobe2025 asm.org/articles/sal...
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Noah Houpt @noahhoupt.bsky.social · 20/06/2025
Come check out my poster tomorrow at #ASMicrobe in the E&EB section! We found that repressor mutations in Pf prophages sparked a coevolutionary dynamic that resulted in loss of twitch motility and susceptibility to virulent pilus-targeting phage. Would love to chat about all things phage :).
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Cathy Hernandez @cathyhernandez.bsky.social · 20/06/2025
For #ASMicrobe folks - looking forward to a busy phage day on Sunday!
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Jyot Antani @antanij.bsky.social · 20/06/2025
ASM studio, the best part (IMO) of the #ASMicrobe meeting @asm.org #ASMicrobe2025
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Jyot Antani @antanij.bsky.social · 20/06/2025
Come to my poster 🔬🦠 #ASMicrobe #ASMicrobe2025 #phage #phagesky
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bioRxiv Synthetic Biology @biorxiv-synthbio.bsky.social · 13/06/2025
Phage-Assisted Evolution of Allosteric Protein Switches www.biorxiv.org/content/10.1101/202…
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Jyot Antani @antanij.bsky.social · 12/06/2025
#phagesky
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Jyot Antani @antanij.bsky.social · 06/06/2025
*High-school level summary article* Wrote a piece describing our recent paper @paulturnerlab.bsky.social to a high-school educated audience. #phagesky #microsky Reach out if you want to do the same for your recent paper. It's super fun! www.journaloflifesciences.org/archives/156...
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Krista Freeman @kfreeman.bsky.social · 16/04/2025
Hurray, it is finally out! Meet bacteriophage Bxb1 - the subject of my first full-phage cryo-EM study. My structures are beautifully complemented by the Park Lab’s cryo-ET analysis, shedding light on mycobacteriophage structural changes during infection. www.sciencedirect.com/science/arti...
sciencedirect.com
Structure and infection dynamics of mycobacteriophage Bxb1
Mycobacteriophage Bxb1 is a well-characterized virus of Mycobacterium smegmatis with double-stranded DNA and a long, flexible tail. Mycobacteriophages…
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Jyot Antani @antanij.bsky.social · 16/05/2025
Our latest preprint just dropped @paulturnerlab.bsky.social We evolved bacteria on swim plates, against a phage that attacks through the flagellum. Motility trades off AND trades up(!!) with phage-resistance! www.biorxiv.org/content/10.1...
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Jyot Antani @antanij.bsky.social · 16/05/2025
(1/3) extension *really* useful in research after a long time! (possibly after Google Scholar Button) AI outline may come in handy at some point (my mind's jury is out on that), but... chromewebstore.google.com/detail/googl...
chromewebstore.google.com
Google Scholar PDF Reader - Chrome Web Store
Supercharge your paper reading: follow references, skim outline, jump to figures, cite and save.
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Jyot Antani @antanij.bsky.social · 08/05/2025
Latest paper drop from Yale Phage Center @paulturnerlab.bsky.social
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Jyot Antani @antanij.bsky.social · 08/05/2025
Very cool thread!
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Phage papers @phagepapers.bsky.social · 20/02/2025
Microscopic phage adsorption assay: High-throughput quantification of virus particle attachment to host bacterial cells. DOI: 10.1073/pnas.2410905121 pubmed.ncbi.nlm.nih.gov/39700139
pubmed.ncbi.nlm.nih.gov
Microscopic phage adsorption assay: High-throughput quantification of virus particle attachment to host bacterial cells - PubMed
Phages, viruses of bacteria, play a pivotal role in Earth's biosphere and hold great promise as therapeutic and diagnostic tools in combating infectious diseases. Attachment of phages to bacterial cells is a crucial initial step of the interaction. The classic assay to quantify the dynamics of phage …
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UBCZoology @zoology.ubc.ca · 03/03/2025
Please join us in welcoming UBC-Zoology’s newest Assistant Professor: Asher Leeks! @asherleeks.bsky.social Today is Asher’s first day as an Assistant Professor of Evolution in the Department of Zoology and the @ubcbiodiversity.bsky.social @science.ubc.ca Welcome Asher! 🙌🏽 asherleeks.com
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Nanami Kubota @nanamikubota.bsky.social · 02/04/2025
Preprint out! Bacteria w/ hyper-replicative filamentous phage lead to overnight emergence of cheater phages. Bacteria w/ both phages can outcompete wildtype, then rapidly lose phage via a phage Tragedy of the Commons @shellyscrib.bsky.social @vscooper.micropopbio.org www.biorxiv.org/content/10.1...
biorxiv.org
Filamentous cheater phages drive bacterial and phage populations to lower fitness
Many bacteria carry phage genome(s) in their chromosome (i.e., prophage), and this intertwines the fitness of the bacterium and the phage. Most Pseudomonas aeruginosa strains carry filamentous phages ...
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Jyot Antani @antanij.bsky.social · 17/04/2025
YaleNews @yale.edu covered our recent paper on measuring virus attachment 🦠🔬🤩 @paulturnerlab.bsky.social @emonetlab.bsky.social news.yale.edu/2025/04/15/n... #MicroSky #PhageSky #Microscopy #Fluorescence
news.yale.edu
New tool offers insights into virus-cell interactions
A method developed by Yale scientists helps reveal how antibacterial agents interact with their host cells — a process that could boost a host of applications that benefit society.
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Jyot Antani @antanij.bsky.social · 26/01/2025
Super cool work modernizing phage biology! #phagesky 💧🔬🦠
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Jyot Antani @antanij.bsky.social · 23/01/2025
My mehndi (henna tattoo) at close cousin's wedding. I asked the tattoo-artist to draw the podovirus where the genome is cousin's wedding logo. #phagesky
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Tara Bartolec @tarabartolec.bsky.social · 23/12/2024
1/11 - With Karin Mitosch and Clément Potel + colleagues in Savitski lab and @typaslab.bsky.social @embl.org, I’m very happy to share our discovery of a hyper-promiscuous phage protein kinase (T7K) which broadly deactivates bacterial defenses! 🦠 www.biorxiv.org/content/10.1...
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John Dennehy @drjdennehy.bsky.social · 24/12/2024
www.pnas.org/doi/10.1073/... Microscopic phage adsorption assay: High-throughput quantification of virus particle attachment to host bacterial cells "..highly quantitative, model-free readouts at single-virus resolution, helping to uncover single-virus phenomena missed by traditional measurements"
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Jyot Antani @antanij.bsky.social · 19/12/2024
We developed a microscopy-based technique🔬 to measure attachment of viruses #phages to host cells. 🦠 The paper was posted online today: www.pnas.org/doi/10.1073/... #phagesky #microsky
Bright green spots are phages (viruses), bacteria are the faint rods in light blue.
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Paul Turner Lab @paulturnerlab.bsky.social · 17/12/2024
Reposted below is the Yale News coverage about our former postdoc @norapyenson.bsky.social's latest paper. And linked below is the summary post from Nora: bsky.app/profile/nora...
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Paul Bollyky @pbollyky.bsky.social · 02/12/2024
Excited to share our work on broadly effective phage-antibiotic cocktails. We report 4 cocktails that each work against 96% of 153 antibiotic resistant Pseudomonas isolates. Check it out here: www.nature.com/articles/s41... Congrats to Kevin Kim @KevinMinyo6651
nature.com
A blueprint for broadly effective bacteriophage-antibiotic cocktails against bacterial infections - Nature Communications
The application of phage therapy for multidrug-resistant infections is mainly limited to personalized therapy due to the narrow host range of individual phages. Here, Kim et al. identify groups of pha...
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Jyot Antani @antanij.bsky.social · 13/12/2024
Phenotypic buffet for phages presented by a clonal population of bacteria 🦠 🧫 Check out this hot paper from my labmates 🤩 The thread presents an excellent... not a tweetorial. Do we call it SKYnopsis here? #phagesky #microsky
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Justin Meyer @justinmeyer.bsky.social · 02/12/2024
I love this study, it started as a way to identify mutations involved in coevolution - a fundamental evolutionary question - and is now contributing to growing interest for predicting phage-bacteria interactions to improve phage therapy. Congrats to the team!
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Drew Bridges @bridgesbio.bsky.social · 26/11/2024
Excited to share our latest, "Biofilm dispersal patterns revealed using far-red fluorogenic probes." @plos.bsky.social We developed a cell-labeling strategy using far-red dyes to image dense microbial communities (where fluorescent proteins often do not work well) journals.plos.org/plosbiology/...
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