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voigtvision.bsky.social

@voigtvision.bsky.social
659 followers 1K following 61 posts

🔬 & 👁️ & 🐟-News & Views by Fabian Voigt - Branco Weiss Fellow in the Engert lab at MCB @harvard.edu. Previously at UZH Zurich with Fritjof Helmchen. #mesoSPIM developer

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voigtvision.bsky.social @voigtvision.bsky.social · 03/09/2026
📢 Superhappy to announce that I've been awarded a 2.5M€ @erc.europa.eu Starting Grant for the project "KALEIDOSCOPE - metasurface-based brain observatories" 🥳🔬 🧠 🐟🥳 📢. The grant will support starting my lab ( voigt-lab.org ) at @mpi-scienceoflight.bsky.social. erc.europa.eu/news-events/...
erc.europa.eu
Starting Grants 2026: Examples of projects
The European Research Council (ERC) has announced the awarding of 421 Starting Grants to outstanding early-career researchers across Europe, as part of the Horizon Europe programme. To illustrate the ...
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voigtvision.bsky.social @voigtvision.bsky.social · 31/08/2026
After 5 years in the lab of Florian Engert at @harvard.edu, it's time to move on and start the Voigt lab ( voigt-lab.org ) at the MPZPM & @mpi-scienceoflight.bsky.social in Erlangen, Germany! Many thanks to all Engert lab members for making the lab so much fun & of course Florian!
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voigtvision.bsky.social @voigtvision.bsky.social · 20/08/2026
🤩 It's time for some invertebrate eye candy! 🤩 Here's a ctenophore (or comb jelly) stained with phalloidin by John Alexander Salazar Hernandez & imaged on an exaSPIM built by Kaelin Wulf of the team of @adamkglaser.bsky.social as part of the FHL Functional Biodiversity course #microscopy
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voigtvision.bsky.social @voigtvision.bsky.social · 12/08/2026
🚨 Now out in @aaas.org Science Advances 🚨: aDISCO: a protocol for clearing & antibody-staining human formalin-fixed paraffin-embedded (FFPE) tissue by Anna Maria Reuss! 🧠🔬#lightsheet #Microscopy @mesospim.bsky.social @ptrrupprecht.bsky.social www.science.org/doi/10.1126/...
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voigtvision.bsky.social @voigtvision.bsky.social · 07/08/2026
The enshittification of Ebay can be quite funny: I have a search for @thorlabs.bsky.social parts set up as a bookmark and it recently started showing me more and more musical instruments - clearly, every #optics & #laser lab needs a clarinet!
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Zebrafish Rock! @zebrafishrock.bsky.social · 07/07/2026
You had us hooked at tissue-clearing an adult #zebrafish 😍
Supplementary Figure 3. Blood-vessel Visualization in Zebrafish and African Turquoise Killifish (A) Tissue-clearing protocol for whole adult zebrafish. PFA: paraformaldehyde, tB: tert-Butanol, THF: tetrahydrofuran, sDBE: stabilized dibenzyl ether, PEGMEMA500: polyethylene glycol methyl ether methacrylate 500 (B) Brightfield (top) and darkfield (bottom) images of adult casper zebrafish. (C–E) Light-sheet images of tissue-cleared samples showing vasculature. (C) Brain of juvenile zebrafish (5 months old) and African turquoise killifish (ATK) (5 weeks old) imaged with a 16× (NA-0.6) objective showing vasculature. Image on OMA-LSFM light sheet microscope. (D) Whole-body imaging of juvenile (5 months old, top) and adult zebrafish (20 months old, bottom) using a 2× NA-0.14 objective. Image on OMA-LSFM light-sheet microscope.
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voigtvision.bsky.social @voigtvision.bsky.social · 06/07/2026
🚨 New Preprint! 🚨: A new method for quantifying #tissue #clearing and a next-get #lightsheet #Microscope - the #mesoSPIM ultra by Marko Pende, @jcregg.bsky.social, @murawalalab.bsky.social @mdibl.org & many more! Preprint: www.biorxiv.org/content/10.6... Github: github.com/mesoSPIM/mes...
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voigtvision.bsky.social @voigtvision.bsky.social · 22/05/2026
The MOSAIC microscope by @supgokul.bsky.social & Eric Betzig & many others is out! #adaptive #optics #lightsheet #Microscopy rocks! www.nature.com/articles/s41...
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voigtvision.bsky.social @voigtvision.bsky.social · 12/05/2026
🚨 New Preprint alert 🚨: The #Altair #lightsheet #Microscopy family is growing: Altair-dvOPM - an open-access direct-view oblique plane microscope based on photographic lenses by @kevin-dean.bsky.social & @retof.bsky.social Manuscript: www.biorxiv.org/content/10.6... & thedeanlab.github.io/altair/
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voigtvision.bsky.social @voigtvision.bsky.social · 13/04/2026
Utterly stunning work & beautiful data taken with the #exaSPIM by @adamkglaser.bsky.social! www.biorxiv.org/content/10.6...
biorxiv.org
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voigtvision.bsky.social @voigtvision.bsky.social · 26/03/2026
🚨New Lab Alert!🚨 Superhappy to announce that I will start my lab combining photonics & neuroscience at the Max Planck Center for Physics & Medicine in Erlangen & @mpi-scienceoflight.bsky.social in January 2027! Reach out if you're interested in internships, BSc, MSc & PhD & postdoc projects!
Max Planck Center for Physics and Medicine buildingMax Planck Instittute for the Science of Light building
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voigtvision.bsky.social @voigtvision.bsky.social · 25/03/2026
Delightful new preprint by @tuthill.bsky.social @bingbrunton.bsky.social & Co: www.biorxiv.org/content/10.6... "This exercise teaches us nothing about either animal and exposes a core peril of connectome-body models: behavioral fidelity is achievable without biological fidelity" 😂😂😂
biorxiv.org
The digital sphinx: Can a worm brain control a fly body?
Animal intelligence is not purely a product of abstract computation in the brain, but emerges from dynamic interactions between the nervous system and the body. New connectome datasets and musculoskeletal models now enable integrated, closed-loop simulations of the neural and biomechanical systems of the fruit fly Drosophila, an ideal model organism to investigate embodied intelligence. However, many biological parameters of the nervous system and the body, as well as how they interface, remain unknown. To fill such gaps, researchers are turning to deep reinforcement learning (DRL), a data-driven optimization framework, to create virtual animals that imitate the behavior of real animals. Here, we provide a cautionary tale about the interpretation of such models. We constructed a virtual chimera of two phylogenetically distant species: a connectome of the C. elegans nematode worm and a biomechanical model of the fly body. The worm connectome receives sensory information from the fly body, and an artificial neural network is trained with DRL to map worm motor neuron activations to the fly's leg actuators. The resulting digital sphinx produces highly realistic fly walking - yet it is biologically meaningless. This exercise teaches us nothing about either animal and exposes a core peril of connectome-body models: behavioral fidelity is achievable without biological fidelity, making such models easy to overinterpret. Done carefully, virtual animals can be powerful partners to biological experiments, but only if their components and interfaces are grounded in biology. ### Competing Interest Statement The authors have declared no competing interest. NIH, U01NS136507, R01NS14543
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voigtvision.bsky.social @voigtvision.bsky.social · 28/02/2026
🚨Preprint alert🚨 Mapping of 3D collagen architecture with #tissueclearing, @mesospim.bsky.social #lightsheet #Microscopy, the Schmidt #multiimmersion microscope objective & #deeplearning in healthy tissue & wound healing by Wout Houbart & Thomas Naert & Co! www.biorxiv.org/content/10.6...
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MDI Biological Laboratory @mdibl.org · 23/02/2026
This amazing #microscopymonday capture of a young African turquoise killifish's brain blood vessels by the MDI Bio Lab's Haller lab was imaged using the MesoSPIM in the MDIBL Light Microscopy Facility. #researchmatters #microscopy #fluorescentproteins #lightsheet 🧪 🐟🎸 🍎 👩‍🔬 🌎 🖥️ 🧬
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Ali Maximilian Erturk @erturklab.bsky.social · 08/02/2026
A new preprint introduces aDISCO, a DISCO-based clearing approach that makes whole archival FFPE human tissues transparent and antibody-compatible, enabling true 3D light-sheet histology across brain & multiple organs at cellular resolution. Aguzzi & Helmchen teams. www.biorxiv.org/content/10.1...
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Kevin Dean @kevin-dean.bsky.social · 05/02/2026
In @elife.bsky.social: A high-resolution, easy-to-build light-sheet microscope for subcellular imaging doi.org/10.7554/eLif...
doi.org
A high-resolution, easy-to-build light-sheet microscope for subcellular imaging
An accessible light-sheet microscope delivers subcellular-resolution, multicolor volumetric, and live-cell imaging, lowering barriers to state-of-the-art performance.
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Doug Shepherd @dpshepherd.bsky.social · 10/12/2025
We're still exploring how to improve LSFM performance with "big" detection air objectives, where field curvature often limits achievable FOV. Here, Steven introduces curvedASLM, a method to dynamically correct field curvature (along one axis) in axially scanned setups www.biorxiv.org/content/10.6...
Schematic on how to correct field curvature along light-sheet propagation axis.
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EMBO @embo.org · 03/12/2025
The EMBO Practical Course "Hack your microscope" in Oeiras, PT, 20–25 Apr 2026 aims to innovate, democratize advanced #imaging technologies and shape the future of open-source #microscopy – Apply now! Deadline: 12 Dec meetings.embo.org/event/26-microsco… #EMBOmicroscope #EMBOevents 🧪
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voigtvision.bsky.social @voigtvision.bsky.social · 22/10/2025
The long wait is finally over: The @thorlabs.bsky.social 8 kHz resonant scanner is available 🔬! It would be lovely if there would be a 30 mm cube compatible & acoustically shielded mount as well, but I'm sure that's going to come eventually! #Microscopy www.thorlabs.com/newgrouppage...
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voigtvision.bsky.social @voigtvision.bsky.social · 22/08/2025
One of the people I'm indebted the most for creating stunningly beautiful #mesoSPIM samples was Martina Schaettin - who tragically passed away in March this year. To honor her memory, Elkhan Yusifov created an award - submit your best #microscopy images & videos! www.linkedin.com/company/mart...
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voigtvision.bsky.social @voigtvision.bsky.social · 22/08/2025
Thanks to @nvladimus.bsky.social the @mesospim.bsky.social #lightsheet #Microscope community is now on forum.image.sc/tag/mesospim !
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voigtvision.bsky.social @voigtvision.bsky.social · 21/08/2025
Definitely the most unexpected @mesospim.bsky.social #lightsheet #microscopy application of the past years: Hunting dark matter with a lightsheet microscope! #astronomy 🔭🔬https://arxiv.org/abs/2503.20732
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voigtvision.bsky.social @voigtvision.bsky.social · 13/08/2025
#Deeplearning-based #CRISPR DNA integration and editing by Thomas Naert & Sören Lienkamp & Co with lots of @mesospim.bsky.social #lightsheet #Microscopy data of tadpoles (and some taken with the #Schmidt #multiimmersion objective prototype!) 🔬🐸 www.nature.com/articles/s41...
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voigtvision.bsky.social @voigtvision.bsky.social · 14/07/2025
⚠️ #alignment #warning: When aligning with the @thorlabs.bsky.social LCPA1 & LCPA2 "T-Shirts" for 60mm cage systems: Be aware that they can have quite incorrect hole & line positioning for fine alignment work! #lightsheet #Microscopy (black lines/numbers are from an reticle in the stereo microscope)
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Le Neuro (Institut-Hôpital neurologique de Montréal) @theneuro.bsky.social · 08/07/2025
Are you leading an #OpenScience initiative advancing the field of #neuroscience? Don’t miss this opportunity to be recognized for your contributions. Submit your application for the Neuro-Irv and Helga Cooper Foundation Open Science Prizes today! 👉Apply now! -link in comments #neurology #datasharing
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voigtvision.bsky.social @voigtvision.bsky.social · 04/06/2025
Cool new @mesospim.bsky.social chamber design!
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voigtvision.bsky.social @voigtvision.bsky.social · 27/05/2025
The culmination of years of hard work by Anna Maria Reuss & Co: aDISCO - a protocol for clearing & antibody-staining human formalin-fixed paraffin-embedded (FFPE) tissue! With lots of @mesospim.bsky.social #lightsheet #Microscopy @ptrrupprecht.bsky.social & many more! www.biorxiv.org/content/10.1...
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voigtvision.bsky.social @voigtvision.bsky.social · 16/05/2025
This is so sad to see 😢
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voigtvision.bsky.social @voigtvision.bsky.social · 16/05/2025
Looking forward to the @mesospim.bsky.social #lightsheet #Microscopy anniversary symposium in October with @preibischs.bsky.social @adamkglaser.bsky.social @christellelangevin.bsky.social & many more! And to the next mesoSPIM decade! 🔬 Thanks @nvladimus.bsky.social & Co for organizing it!
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voigtvision.bsky.social @voigtvision.bsky.social · 13/05/2025
For scientists interested in exploring job opportunities in Europe and especially France: @cnrs.fr started an initiative "Choose CNRS": www.cnrs.fr/en/update/ch...
cnrs.fr
'Choose CNRS' – the opportunities for scientists from other countries
Four schemes are available to encourage talented young researchers and internationally-renowned scientists to consider moving to France and
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voigtvision.bsky.social @voigtvision.bsky.social · 08/05/2025
Thanks to expansion microscopy, clever labeling, and modern segmentation approaches, doing connectomics with #light #microscopy has become feasible - huge congratulations Mojtaba & the Danzl lab at @istaresearch.bsky.social ! www.nature.com/articles/s41...
nature.com
Light-microscopy-based connectomic reconstruction of mammalian brain tissue - Nature
A technique called LICONN (light-microscopy-based connectomics) allows mapping of brain tissue at synapse level and simultaneous measurement of molecular information, thus enabling quantification of c...
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voigtvision.bsky.social @voigtvision.bsky.social · 11/03/2025
If you happen to need a #lightsheet #Microscope for cleared tissue on a budget: There is a Lavision Ultramicroscope on Ebay right now for $6.5k: www.ebay.com/itm/38806209... It's missing the laser unit and the PC but could serve as an excellent source of parts to build a #mesoSPIM 😉: mesospim.org
ebay.com
Olympus MVX10 Stereo Zoom Microscope MVX 10 & Parts BioTec Andor Neo sCMOS | eBay
Was able to do and have not received one complaint.
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voigtvision.bsky.social @voigtvision.bsky.social · 12/02/2025
It was great to see you again @edwardlachica3.bsky.social & sorry for the punch!
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voigtvision.bsky.social @voigtvision.bsky.social · 31/01/2025
There is some cool new #photophysics in town! Check out tripletimaging.co, the startup created by wongcamposd.bsky.social Dalia Ornelas-Huerta & Mackenzie Dion to explore #multiphoton #Microscopy via long-lived intermediate states:: www.tripletimaging.co/s/dyes and www.tripletimaging.co/s/proteins
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David Schoppik @schoppik.com · 30/01/2025
Some really beautiful developmental biology looking at how to build an arthropod body. Legs for days! www.biorxiv.org/content/10.1...
Wild-type morphology of the Parhyale thorax and abdomen. T1-8, thoracic body segments 1-8 with corresponding legs. A1-6, abdominal body segments 1-6 with corresponding legs. A. Whole hatchling.
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voigtvision.bsky.social @voigtvision.bsky.social · 27/01/2025
In 2019, the #mesoSPIM and #ctASLM #lightsheet #Microscopy papers appeared back-to-back in @naturemethods.bsky.social - now Jinlong Lin, @zacsimile.bsky.social & @kevin-dean.bsky.social & Co introduce the MCT-ASLM - a chimera of both for smart multiscale #imaging! www.biorxiv.org/content/10.1...
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voigtvision.bsky.social @voigtvision.bsky.social · 27/01/2025
Seems like there is a new ultracompact #femtosecond #laser source for #multiphoton #microscopy in town! 50 MHz rep rate means a 2-3 m cavity if there is a single pulse circulating in the cavity - folding that into that compact of a form factor is quite impressive! www.laseratwork.com/products-ove...
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Nikita Vladimirov @nvladimus.bsky.social · 20/01/2025
Please welcome our official #mesoSPIM channel on this platform, @mesospim.bsky.social. Repost is appreciated!
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voigtvision.bsky.social @voigtvision.bsky.social · 20/01/2025
Finally created an account here - stay tuned for news & views on #lightsheet #microscopes, #photonics, #vision, #zebrafish and more!
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mesoSPIM: Clear Images. Big samples. Open source. @mesospim.bsky.social · 20/01/2025
The next-generation open-source "Benchtop" #mesoSPIM light-sheet microscope, with open access to everyone. Find the detailed blueprints on how to build your own, and examples of applications, from neuroscience to astrophysics! link.springer.com/article/10.1...
link.springer.com
Benchtop mesoSPIM: a next-generation open-source light-sheet microscope for cleared samples - Nature Communications
In 2015, we launched the mesoSPIM initiative, an open-source project for making light-sheet microscopy of large cleared tissues more accessible. Meanwhile, the demand for imaging larger samples at hig...
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