Sign in

Sebastian Gregoricchio, Ph.D.

@sgregoricchio.bsky.social
154 followers 206 following 10 posts

Postdoc in the Zwart lab at the Netherlands Cancer Institute (Amsterdam, Netherlands, @nkinl.bsky.social, @zwartlab.bsky.social). Studying gene regulation and 3D-genome organization in cancer. X/Twitter: @s_gregoricchio

PostsRepliesMedia
Sebastian Gregoricchio, Ph.D. @sgregoricchio.bsky.social · 11/02/2026
💡“DEprot” is now out on @narjournal.bsky.social Genomics and Bioinformatics. With Nils Eickhoff ( @zwartlab.bsky.social, @nkinl.bsky.social & @oncodeinstitute.bsky.social), we designed this “all-in-one” tool to facilitate the analyses of LFQ-based proteomics data. academic.oup.com/nargab/artic...
academic.oup.com
DEprot: a comprehensive R-package for the analysis of label-free quantitation mass spectrometry data
Abstract. In recent years, studies investigating protein–protein interactions on a proteome-wide scale have increased exponentially. These developments wer
274
Sebastian Gregoricchio, Ph.D. @sgregoricchio.bsky.social · 10/12/2025
Proud to be part of this story! Congrats @nunopadrao.bsky.social !!!
040
Reposted by Sebastian Gregoricchio, Ph.D.
Netherlands Cancer Institute @nkinl.bsky.social · 09/12/2025
Corticosteroids may re-sensitize metastatic HR+ breast cancer to endocrine therapy by mimicking cortisol-driven fasting responses. Our study, published in Nature, shows a potential new use for a cheap and widely used drug class. ➡️ www.nki.nl/news-events/...
192
Reposted by Sebastian Gregoricchio, Ph.D.
Elzo de Wit lab @ NKI @dewitlab.bsky.social · 18/08/2025
We all know that cancers -even from the same subtype- are highly heterogeneous right? In a new study we asked whether this was also the case for the three-dimensional organization of the genome in breast cancer. The answer: it’s complicated. www.cell.com/iscience/ful...
cell.com
A 3D genome compendium of breast cancer progression
Genomics; Chromosome organization; Molecular Genetics; Cancer
1145
Sebastian Gregoricchio, Ph.D. @sgregoricchio.bsky.social · 05/07/2025
Discover the role of #Zincore, a novel protein complex that acts as a co-regulator in activating DNA transcription by zinc finger transcription factors in this amazing work from @daaninthelab.bsky.social et al., now published in @science.org! Proud to have participated in this beautiful project!
040
Reposted by Sebastian Gregoricchio, Ph.D.
Elizabeth McKenna @elizsmckenna.bsky.social · 16/06/2025
Now online in Cancer Discovery: Germline-Somatic Liaison Dictates Cancer Subtype via de novo Steroid Biosynthesis - by Paola Gasperini, Alessandro Alaimo, Blerta Stringa, Andrea Lunardi, Francesca Demichelis, and colleagues doi.org/10.1158/2159...
053
Reposted by Sebastian Gregoricchio, Ph.D.
Zwartlab NKI @zwartlab.bsky.social · 10/05/2025
Check out our latest paper! Out now in Genome Biology! Many thanks to all coauthors for their invaluable contributions on this lengthy journey pubmed.ncbi.nlm.nih.gov/40346709/
pubmed.ncbi.nlm.nih.gov
Endometrial tumorigenesis involves epigenetic plasticity demarcating non-coding somatic mutations and 3D-genome alterations - PubMed
In summary, we identify a complex genomic-epigenomic interplay in EC development and progression, altering 3D genome organization to enhance expression of the critical driver ERα.
063
Sebastian Gregoricchio, Ph.D. @sgregoricchio.bsky.social · 07/05/2025
📢 Are you approaching the epigenetic world? Or you want to know more about ATAC-seq and it's applications? In this case join the @oncodeinstitute.bsky.social workshop that will take place the 19th of September at the @nkinl.bsky.social !! Places are limited to 35!! Subscribe at the following link:
oncodeinstitute.nl
Masterclass: ATAC-seq data analysis and applications | Oncode Institute
By Sebastian Gregoricchio (lab Wilbert Zwart, Netherlands Cancer Institute)
041
Reposted by Sebastian Gregoricchio, Ph.D.
bioRxivpreprint @biorxivpreprint.bsky.social · 17/02/2025
TRIM33 loss reduces Androgen Receptor transcriptional output and H2BK120 ubiquitination www.biorxiv.org/content/10.1101/202…
011
Reposted by Sebastian Gregoricchio, Ph.D.
Zwartlab NKI @zwartlab.bsky.social · 17/02/2025
Check out our latest preprint! Interested in Androgen Receptor, gene regulation and TRIM proteins? Well, in that case, I believe you’ll like this story! www.biorxiv.org/content/10.1...
biorxiv.org
TRIM33 loss reduces Androgen Receptor transcriptional output and H2BK120 ubiquitination
The Androgen Receptor (AR) is a ligand-dependent transcription factor that drives prostate cancer development and progression. Although, a detailed effect on AR biology has been described for a number...
094