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Sam Hemmings

@samhemmings.bsky.social
129 followers 220 following 12 posts

PhD student | Fisher Lab | Imperial 🍄Interested in fungal AMR, genetics, ecology and air quality🍄

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Reposted by Sam Hemmings
Richard Leggett @richardmleggett.bsky.social · 07/09/2026
Really pleased to have this preprint out covering air metagenomics in urban environments. It's part of a long-standing collaboration between @earlhaminst.bsky.social and @nhm-london.bsky.social
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Sam Hemmings @samhemmings.bsky.social · 07/09/2026
Had a fantastic time at the first #CryptoADAPT workshop, this time hosted by FABI, University of Pretoria 🇿🇦 Was really great meeting everybody in person for the first time, sharing ideas and getting the Cryptococcus sampling off the ground! Look forward to the next workshop
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Reposted by Sam Hemmings
Fungal One Health and Antimicrobial Resistance (F1AMR) Network @f1amr-network.bsky.social · 23/07/2026
Fungal AMR: the movie (OK, the title needs some work) dropping this November! A sneak peak of our interview with Mat Fisher on ecology and #fAMR, mould in homes, and the chytridiomycosis pandemic in frogs
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Fungal One Health and Antimicrobial Resistance (F1AMR) Network @f1amr-network.bsky.social · 23/07/2026
Excellent to see that the @who.int blueprint on fungal disease and fAMR is now available. Well done to all involved.
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Alice Laigle @alicelaigle.bsky.social · 23/07/2026
📝 NEW PREPRINT It’s with an immense joy that our preprint is finally out and it’s my first first co-author paper!!! 🧬🍄 What is the diversity of 3D genome architectures in fungi? We reconstructed the 3D genome architecture of public Hi-C data from 55 fungal. Preprint: lnkd.in/enxTh2Cm
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Bertuzzi Lab @bertuzzilab.bsky.social · 04/07/2026
The Manchester Fungal Infection Group is recruiting two new Research Technicians! For more information, please look here www.jobs.manchester.ac.uk/internal/Job... www.jobs.manchester.ac.uk/Job/JobDetai...
jobs.manchester.ac.uk
Research Technician:Oxford Road
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Neil Gow @neil-gow.bsky.social · 02/07/2026
Women in Mycology (WIM) by MSGERC and Women for Mycology (WOMYC) have joined forces to launch a global survey on career development. This will directly inform programs within MSGERC, ECMM, and ISHAM. survey open until 31 July 2026.  www.clinicalsurveys.net/uc/wim-womyc...
clinicalsurveys.net
Survey
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The MRC Centre for Medical Mycology @mrccmm.bsky.social · 03/07/2026
🌍 A great discussion at #ICCC2026 with Exeter Climate Forum to explore how climate change is influencing fungal diseases. Thanks to our fantastic speakers, organisers, funders & attendees! #MedicalMycology #ClimateChange @balloulab.bsky.social @robinmay9.bsky.social @wellcometrust.bsky.social
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Fungal One Health and Antimicrobial Resistance (F1AMR) Network @f1amr-network.bsky.social · 26/06/2026
Antifungal treatment is threatened by the dual-use of chemicals in agriculture and medicine. To address the UK’s fragmented response to this urgent problem, we call for: • A cross-government fAMR body • Improved fAMR surveillance • Fungicide policy reform Read now: www.nature.com/articles/s44...
nature.com
Addressing the dual-use of antifungals and fungal antimicrobial resistance (fAMR) through a One Health approach - npj Antimicrobials and Resistance
npj Antimicrobials and Resistance - Addressing the dual-use of antifungals and fungal antimicrobial resistance (fAMR) through a One Health approach
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Natalie Bennett @nataliegreenpeer.bsky.social · 18/06/2026
Written question for Department of Health and Social Care Drugs:Research Tabled on 5 June 2026 Answered 16 June 2026
Tabled 5 June 2026
Baroness Bennett of Manor Castle (Green Party):
To ask His Majesty's Government what (1) financial support, and (2) other support, they are providing to support the (a) discovery, (b) development, and (c) delivery of new anti-fungal drugs.Answered on 16 June 2026
Baroness Merron (Labour):

We recognise antimicrobial resistance (AMR), including resistance to fungal pathogens, is a significant and growing threat to public health. The Department supports research and innovation across the pipeline from discovery through to development and delivery of new antifungal treatments.
Through the National Institute for Health and Care Research (NIHR), the Department has invested substantially in AMR research, which includes antifungal innovation. Over the last five years, the NIHR has invested over £88 million in AMR programme funding, supporting research to understand infections, optimise antimicrobial use, and develop new antimicrobials.
Continues next slideContinued.
The Global AMR Innovation Fund has established a work package specifically to stimulate innovation and provide support for the development of products to combat fungal AMR via Fungal AMR Innovations for LMICs: Solutions and Access For Everyone (FAILSAFE), run by the Centre for Medical Mycology at the University of Exeter. FAILSAFE funds vital research and development in this space as well as providing training and capacity building and has established the world’s largest medical mycology network of over 1,100 members.
Beyond direct funding, the NIHR supports research infrastructure such as Biomedical Research Centres and Health Protection Research Units, and the United Kingdom’s 2024–2029 AMR National Action Plan prioritises the development of new treatments and their translation into practice.
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Natalie Bennett @nataliegreenpeer.bsky.social · 17/06/2026
Formal written question for Department for Environmental, Food and Rural Affairs Fungal Diseases: Import Controls Asked on 5 June 2026 Answered 17 June 2026
Baroness Bennett of Manor Castle, Green Party: To ask His Majesty's Government what measures they are taking to identify and prevent the importation of drug-resistant fungal pathogens in plant-derived materials in food and non-food products; and what research they have undertaken to support this work.Baroness Hayman of Ullock, Labour: The Food Standards Agency (FSA) monitors risks from global food and feed imports and will take action to control these where there is a risk to public health. FSA monitoring has not identified drug-resistant fungi as an issue of concern for food currently entering Great Britain.  The FSA is not aware of any specific risks to consumers associated with drug-resistant fungi in food. It is not conducting any specific research or surveillance in this area. However, the FSA is cognisant of the growing risk to human health associated with some fungi present in the environment, which are developing drug resistance. Research is being funded to understand this risk better, for example through the Fungal One Health and Antimicrobial Resistance (AMR) Network funded by UK Research and Innovation. The FSA also continues to play its part in the fight against AMR through active participation in the UK’s AMR National Action Plan and its programme of research and surveillance focused on foodborne bacterial pathogens. Continues next slide.Continued from previous slide. In support of AMR Action Plan commitments, the Environment Agency actively carries out research into environmental AMR, including antifungal resistance.  Currently the Health and Safety Executive (HSE) considers the potential for resistance development in the target pest organism during the plant protection product approvals process. Where resistance is known or anticipated, HSE places specific limitations on the use of the product to help mitigate the likelihood and speed of resistance development.  Defra is taking action to address the risks of resistance building by empowering farmers to make informed decisions as they manage pests, weeds and diseases. The UK Pesticides National Action Plan (NAP) sets out the actions we will take to support effective and sustainable pest management. A key goal in the NAP is increasing uptake of integrated pest management – a holistic approach that reduces the likelihood of resistance building by minimising and optimising pesticide use.
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Nichola Hawkins @nicholahawkins.bsky.social · 17/06/2026
New article from @theccdm.bsky.social on using NanoPore sequencing to detect fungicide resistance alleles in airborne spores, as part of our our joint Aerobiomics-AMR project with Wageningen University and Research, Teagasc, INRAE and the University of Warmia and Mazury.
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Global Action Plan @globalactionplan.bsky.social · 16/06/2026
Reducing levels of harmful air pollution in our communities will have immediate health benefits for all of us. With #CleanAirDay only two days away, take action and join people across the country calling on local councillors to commit to cleaning up the air: cleanairday.org.uk
Cleaner air benefits all of us. 

By taking action together we can improve everyone's health, boost local economies, and make our communities greener. 

Learn more at: Cleanairhub.org.uk

[Icons of adults, children and a dog standing amongst trees, while someone on a bicycle rides past.] 

Clean Air Fund logo, Global Action Plan logo and Clean Air Day logo.
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House of Commons Committees @hoccommittees.parliament.uk · 16/06/2026
In our first evidence session on data centres, Oliver Hayes, Head of Policy at @globalactionplan.bsky.social, told us that local people don't feel involved in the planning process of new data centres, and thousands of jobs promoted to local communities fall far short under closer scrutiny.
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Katie Holten @katieholten.bsky.social · 15/06/2026
A hidden circulatory system pulses just beneath the planet’s surface. Embedded in soil, dense networks of microorganisms, arbuscular mycorrhizal fungi, attach to plant roots. Laid end to end, these filaments would extend for 68 quadrillion miles. Great work by Toby Kiers @spun.earth Gift link 🍄
nytimes.com
68 Quadrillion Underground Miles of Fungi
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Toni Gabaldón @tonigabaldon.bsky.social · 10/06/2026
Our paper "Gene ancestries reveal diverse microbial associations during eukaryogenesis.” is finally out in Nature. Eukaryogenesis was likely a gradual process shaped by multiple microbial partners and virus-mediated gene transfer, rather than a single binary symbiosis. doi.org/10.1038/s415...
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Fungal One Health and Antimicrobial Resistance (F1AMR) Network @f1amr-network.bsky.social · 07/06/2026
Such a good day playing Resistance Reservoirs at the Great Exhibition Road Festival yesterday! Come down to the Underground Adventure Zone 12-6 today to learn about fungal disease and antifungal resistance #GERF2026 @imperialcollegeldn.bsky.social
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Natalie Bennett @nataliegreenpeer.bsky.social · 08/06/2026
#PublicHealth - poor housing standards are contributing to terrible state in UK in ways we do, and don't, understand #Fungi #Ventilation #AirQuality phys.org/news/2026-06...
phys.org
Study shows indoor air contains greater diversity of airborne fungi than previously thought
Researchers from Imperial College London have conducted the U.K.'s largest-ever longitudinal study of indoor fungal air pollution, revealing that homes are active fungal ecosystems rather than passive...
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Natalie Bennett @nataliegreenpeer.bsky.social · 07/06/2026
Useful general report on the paper to which I contributed on fungal #AMR and #OneHealth #PublicHealth www.manchester.ac.uk/about/news/f...
manchester.ac.uk
Fungus threatens food and human health, researchers argue
A looming public health crisis may be spreading from Britain’s fields to its hospitals, a experts  -which include University of Manchester scientists-  have warned — with common farm chemicals potenti...
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Sam Hemmings @samhemmings.bsky.social · 05/06/2026
@imperialmed.bsky.social have also put together a great overview of our work published today in @lancetmicrobe.bsky.social, highlighting the findings in the broader context of Indoor Air Quality and UK Policy
imperial.ac.uk
Indoor air contains greater diversity of airborne fungi than previously thought, Imperial study finds
Researchers from Imperial College London have conducted the UK’s largest-ever longitudinal study of indoor fungal air pollution, revealing that...
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Sam Hemmings @samhemmings.bsky.social · 05/06/2026
Incredibly happy to share that our work investigating fungal bioaerosol exposure in 118 homes across London has been published in The Lancet Microbe today! A huge thank you to all the co-authors, collaborators, and community scientists who made this work possible. You can find the paper below!
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Nature Communications @natcomms.nature.com · 20/05/2026
#Fungi : Large-scale multi-omics profiling reveals environmental and evolutionary drivers of the phylogeographic and metabolic diversity of the fungus Aspergillus flavus #MicrobialEcology
dlvr.it
Large-scale multi-omics profiling reveals environmental and evolutionary drivers of fungal phylogeographic and metabolic diversity - Nature Communications
Drivers of fungal metabolic diversity are incompletely understood. Here, the authors conduct a global genomics study of over 1,000 pathogenic fungi to show that geography shapes the metabolic diversity in Aspergillus flavus revealing how climate drives fungal chemical adaptive evolution.
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British Mycological Society @britmycolsoc.org.uk · 21/05/2026
⭐#BMS2026 Speaker Highlight⭐ Matthew Fisher, Imperial College London, UK Matt will draw on data from Aspergillus fumigatus studies to show how agricultural substrates contaminated with fungicides drive the emergence of antifungal resistance. ➡️ www.britmycolsoc.org.uk/asm.html
Photo of Matthew Fisher, Imperial College London - speaker at the BMS Annual Scientific Meeting 2026.
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Jo Rhodes @drjorhodes.com · 14/05/2026
An important Nature Outlook article from Nic Fleming on antifungal resistance: www.nature.com/articles/d41...
nature.com
Antifungal resistance is growing – will new treatments turn the tables?
Trials of drugs to fight deadly resistant infections are advancing, but they might fall victim to overuse of agricultural fungicides just like their predecessors.
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Fiona J Whelan @whelanfj.bsky.social · 11/05/2026
📣 Whelan lab is hiring 📣 We are looking for an entry level technician to help us with our culturing and DNA sequencing prep of cystic fibrosis lung microbiome samples. Applications close 20 May 2026. www.jobs.manchester.ac.uk/Job/JobDetai...
jobs.manchester.ac.uk
Research Technician in Microbiology and Molecular Biology:Oxford Road
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Fungal One Health and Antimicrobial Resistance (F1AMR) Network @f1amr-network.bsky.social · 25/03/2026
Our programme for May 7th (Manchester and online) is now live - in-person registration open until April 21st! Lots of great speakers including @mcmomany.bsky.social @aoifeodriscoll.bsky.social @normanvanrhijn.bsky.social @jon-otter.bsky.social www.fungalamr.org/post/f1amr-s...
fungalamr.org
F1AMR Scientific Meeting May 7th 2026: Live Programme
What? F1AMR Network Scientific Meeting When? Thursday May 7th 2026Where? University of Manchester, UK At this fully hybrid event, we will hear presentations from colleagues in research, industry and t...
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Jason Stajich @hyphaltip.bsky.social · 17/04/2026
The global mycology community calling for an effort to combat drug‑resistant - Closing the gap on antifungal resistance www.nature.com/articles/s41...
nature.com
Closing the gap on antifungal resistance - Nature Medicine
Drug-resistant fungal disease must be addressed in the 2026 update to the Global Action Plan on Antimicrobial Resistance
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Harry Chown @chownbioinf.bsky.social · 17/04/2026
First day back after a great time in Belfast at #MicroSoc26 @microbiologysociety.org. Thank you to the organisers for the opportunity to present my work. Which, if you missed, is now currently available on bioRxiv!
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Dr Gary Fuller @drgaryfuller.bsky.social · 17/04/2026
"Air pollution acts as a silent accelerator that robs individuals of their healthiest years.” My latest piece for @theguardian.com on research on 396,000 people in the UK. www.theguardian.com/environment/...
theguardian.com
Air pollution making people in UK get long-term illnesses earlier, study finds
Pollution is ‘silent accelerator that robs individuals of their healthiest years’, say researchers
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Whitney Bauck @whitneybauck.bsky.social · 15/04/2026
Fungi make so much of life on earth possible—but are too often left out of conservation. That's slowly starting to change. As it does, a cohort of mycologists across Africa are pioneering the study and conservation of fungi in their home countries. My latest: www.theguardian.com/environment/...
theguardian.com
‘Without them there is no life’: the race to understand the mysterious world of Africa’s fungi
Amid growing evidence of fungi’s key role in ecosystems and storing carbon, African scientists are championing the need to preserve ‘funga’ as much as flora and fauna
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Sam Horsfield @samuelhorsfield.bsky.social · 30/03/2026
ggCaller v1.5.0 is out! We've removed the integrated clustering to enable users to benefit from new Panaroo features. Now, ggCaller generates GFFs that can be used with any clustering method. But for fans of an integrated ggCaller pangenome workflow read on... github.com/bacpop/ggCal...
github.com
GitHub - bacpop/ggCaller: Bifrost graph gene caller.
Bifrost graph gene caller. Contribute to bacpop/ggCaller development by creating an account on GitHub.
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The Lancet Microbe @lancetmicrobe.bsky.social · 27/03/2026
New review article WHO assessment of the preclinical #antifungal pipeline: evaluating innovation and preparedness in the face of emerging fungal threats www.thelancet.com/journals/lan... #IDSky #ClinMicro #MycoSky #OpenAccess #OA
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Will Pearse @willpearse.bsky.social · 26/03/2026
Develop a forecasts of severe patient harm to be used by the NHS! Every 4-hour delay in Emergency Department admission increases 30-day mortality risk by 8%: join the SPHERE forecasting contest and help the NHS reduce delays before they happen! Find out more here: www.imperial.ac.uk/news/article...
imperial.ac.uk
Researchers launch forecasting challenge to help predict severe patient harm in NHS hospitals
Researchers have launched a new data science challenge aimed at improving the ability of NHS hospitals to anticipate and prevent severe patient harm.
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Michael Habig @michaelhabig.bsky.social · 25/03/2026
Now out! We show that TEs can be horizontally transferred between fungal species via Starships. Once transferred, these TEs can become active, changing the genome organization and affecting the lifestyle of the recipient fungus. www.nature.com/articles/s41... @oggenfussursula.bsky.social #TEsky
nature.com
Transposable elements hitchhike on Starships across fungal genomes - Nature Communications
Large mobile genetic elements known as Starships act as vehicles for transferring transposable elements (TEs) between fungi. Here, Griem-Krey et al. show that these ‘hitchhiking’ TEs can drive rapid e...
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Jo Rhodes @drjorhodes.com · 14/03/2026
Excited to share our latest work: “Antarctic marine microplastics reveals environmental persistence and rapid evolution of Candida auris.” www.biorxiv.org/content/10.6... This study explores how environmental microplastics may act as reservoirs for Candida auris. 🧵
biorxiv.org
Antarctic marine microplastics reveals environmental persistence and rapid evolution of Candida auris
Candida ( Candidozyma ) auris is a critical priority fungal pathogen that emerged two decades ago near simultaneously on multiple continents. Since emergence, C. auris resistance to all four classes of antifungal drugs has been described, including pan-drug resistant isolates, sometimes evolving in-patient. Here, we confirm the first isolation of C. auris from Antarctica and show cold-adapted phenotypes and an affinity for binding to nylon. We also provide evidence to suggest mutator phenotypes contribute to the rapid evolution in C. auris and are responsible for the emergence of multiple, distinct genetic clades worldwide. Isolates in clades I, III and IV with a mutator phenotype displayed elevated mutation rates compared to non-auris Candida species. This phenotype had a complex genetic basis and was associated with drug resistance mutations. We postulate that the mutator phenotype has a significant effect on evolutionary potential and is responsible for the emergence and rapid spread of drug-resistance C. auris and novel genetic clades. ### Competing Interest Statement This work was partially support by a Wellcome Trust Institutional Strategic Fung Springboard Fellowship awarded to JR. PH and JR were funded through a JPIAMR IMPACT grant (JPIAMR2024_IMPACT-197 Consortium grant: FuGACI) and the Dutch Organisation for knowledge and innovation in health, healthcare and wellbeing (ZonMw) under project number 10570172410003. NvR is supported by a Wellcome Trust fellowship (226408/Z/22/Z). MCF is a fellow of the Canadian Institute for Advanced Research (CIFAR). RAF is supported by a Wellcome Trust Career Development Award (225303/Z/22/Z). JLS is a Howard Hughes Medical Institute Awardee of the Life Sciences Research Foundation. SD and HG are supported by the MRC Centre for Medical Mycology at the University of Exeter (MR/N006364/2 and MR/V033417/1), and the MRC Doctoral Training Grant (MR/P501955/2), and the NIHR Exeter Biomedical Research Centre. The views expressed are those of the authors and not necessarily those of the NIHR or the Department of Health and Social Care. We also thank the Exeter Sequencing Service facility and support from Wellcome Trust Institutional Strategic Support Fund (WT097835MF), Wellcome Trust Multi User Equipment Awards (WT101650MA and 218247/Z/19/Z), Medical Research Council Clinical Infrastructure Funding (MR/M008924/1) and BBSRC LOLA award (BB/K003240/1), as well as the University of Exeter High-Performance Computing (HPC) facility, funded by the UK MRC Clinical Research Infrastructure Initiative (award number MR/M008924/1). Wellcome Trust, https://ror.org/029chgv08, Strategic Fung Springboard, 226408/Z/22/Z, 225303/Z/22/Z JPI-AMR, JPIAMR2024_IMPACT-197 Consortium grant: FuGACI ZonMw, The Dutch Organisation for knowledge and innovation in health, healthcare and well-being, 10570172410003 CIFAR Howard Hughes Medical Institute Awardee of the Life Sciences Research Foundation MRC Centre for Medical Mycology at the University of Exeter, MR/N006364/2, MR/V033417/1 MRC Doctoral Training Grant, MR/P501955/2 NIHR Exeter Biomedical Research Centre BBSRC, BB/W009625/1 MRC, MR/4002163/1
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MRC Centre for Global Infectious Disease Analysis @mrc-outbreak.bsky.social · 17/03/2026
✨NEW EPISODE✨ #ScienceInContext This week @eonore.bsky.social speaks with Prof Nicholas Grassly & Dr Joyce Akello about wastewater surveillance as early warning of viruses with pandemic potential & the WASPP Network👇 youtu.be/7sbL-Eq9U7A @imperialcollegeldn.bsky.social @gatesfoundation.bsky.social
youtu.be
YouTube
Share your videos with friends, family, and the world
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Applied Microbiology International @amiposts.bsky.social · 12/03/2026
Did you know an air fryer can thermocycle? Read the journey of two scientists’ attempts to run a PCR cycle in the kitchen, in the latest feature in #TheMicrobiologist. www.the-microbiologist.com/features…
the-microbiologist.com
A journey to run a polymerase chain reaction in the kitchen
Did you know an air fryer can thermocycle?
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Genetics Society of America @genetics-gsa.bsky.social · 11/03/2026
🌟 New at #Fungal26—the inaugural Fungal Spore Lecture featuring Matthew C. Fisher (Imperial College London). Working at the One Health interface, Fisher explores how antifungal use and global trade are reshaping the Fungal Kingdom. Join us for his lecture: buff.ly/oCNlI2l
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Toby Baril @tobybarilbio.bsky.social · 05/03/2026
Need to annotate transposons in fungal genomes? 🧬 Good news #MycoMobilome is now live! Check it out here: doi.org/10.1093/narg... Access the sequences through our Zenodo community (you can also contribute seqs with credit), and synchronisation with @dfam.bsky.social! w/ @danielcroll.bsky.social
doi.org
MycoMobilome: a community-focused non-redundant database of transposable element consensus sequences for the fungal kingdom
Abstract. Transposable elements (TEs) are found in nearly all eukaryotic genomes. Despite significant advances in the sequencing of genomes, TE resources r
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British Mycological Society @britmycolsoc.org.uk · 04/03/2026
📣 Call for Abstracts - British Mycological Society 2026 Annual Scientific Meeting. Inviting researchers, early-career scientists, postgraduate students, & practitioners to share their latest research👉 Event webpage & abstract submission: www.britmycolsoc.org.uk/asm.html #BMS2026
Poster of the call for abstracts fir the BMS Annual Scientific Meeting, with a photo of the Royal Holloway campus building at sunset..
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Society for the Protection of Underground Networks (SPUN) @spun.earth · 17/02/2026
New study in @nature.com finds pesticides in 70% of soils sampled across Europe, showing they suppress beneficial arbuscular mycorrhizal fungi. Authors call for assessing pesticide impacts on entire soil communities to better protect soil biodiversity. Link to paper: buff.ly/wJzWiYB
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John Lees @johnlees.bacpop.org · 09/02/2026
How do bacterial pangenomes evolve, what controls their dynamics, why do they exist? Fitting a mechanistic model to 450 species from allthebacteria.org suggesting fast vs slow gene exchange (i.e. amount of MGEs) is a major differentiating factor, correlated with phylogeny rather than lifestyle
Proportion of fast genes, as a trait mapped on the bacteria-wide phylogeny
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Sam Horsfield @samuelhorsfield.bsky.social · 07/02/2026
At long last, my final PhD chapter is out: we developed a novel evolutionary simulator of bacterial pangenomes, Pansim, fitting it to data from >600K genomes using a likelihood-free framework, PopPUNK-mod, to explore neutral and adaptive pangenome dynamics www.biorxiv.org/content/10.6...
biorxiv.org
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Pat Schloss @patschloss.bsky.social · 07/01/2026
New paper up on bioRxiv! This is my third and hopefully final paper on rarefaction. It's still better than the other available methods. www.biorxiv.org/content/10.6...
biorxiv.org
Rarefaction is better than robust Aitchison PCA and other compositional data analysis methods at controlling for uneven sequencing effort
Amplicon sequencing typically results in a wide distribution in the number of sequences obtained from each sample. How best to account for this variation has been a persistent problem in the microbial...
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Morten Kam Dahl Dueholm @mkddueholm.bsky.social · 06/01/2026
Really important read for people working with long-read MAGs. www.nature.com/articles/s41...
nature.com
Troubleshooting common errors in assemblies of long-read metagenomes - Nature Biotechnology
Long-read sequence assemblies from metagenomes contain frequent errors.
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Sarah Dellière @sarah-delliere.bsky.social · 06/02/2026
🔥 New study on invasive #mold infections in severe #burn patients. These infections affect ~20% of cases and are hard to distinguish from colonization. We analyzed 6,000+ samples from 276 patients to identify strategies that could improve mycological diagnosis. 🔗 bit.ly/4a4l6I0
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Jo Rhodes @drjorhodes.com · 05/02/2026
Really proud of former PhD student Hugh Gifford for wrapping up this massive project, looking at almost 13k whole genome C. auris sequences 1997-2024! www.biorxiv.org/content/10.6...
biorxiv.org
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Paul Behrens @profpaulbehrens.bsky.social · 30/01/2026
I wrote an op-ed for the @bmj.com on the UK government's national security assessment on ecosystem collapse and how we need act. This report was released last week, delayed by months—allegedly it was seen as too negative by number 10—and abridged🧵 www.bmj.com/content/392/...
bmj.com
Ecosystem destruction will force the UK to tackle food security
The UK’s approach to food makes it increasingly vulnerable in an unstable world. A great food transformation with a focus on resilience is urgently needed, argues Paul Behrens Last week the UK gover...
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Mayor of London, Sadiq Khan @london.gov.uk · 22/01/2026
Many aren't aware that burning wood at home can seriously impact indoor and outdoor air quality. Tonight is Clean Air Night - learn about how to protect your health and your home: www.actionforcleanair.org.uk/campaigns/cl...
A graphic with dark blue background showing orange smoke‑cloud icons and text about Clean Air Night. The message reads: ‘We all want to stay warm this winter… but cosiness shouldn’t cost the health of our communities. This #CleanAirNight share the uncomfortable truth about wood burning.’ Logos for Clean Air Night, Global Action Plan, and Impact on Urban Health appear at the bottom, along with the date 22 January 2026.
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Chris Knight @knightjar.bsky.social · 02/02/2026
We're Hiring! We're looking for a postdoc with bioinformatics/modelling skills to join us in an exciting microbiome ecology project in Manchester (deadline 1st March) www.jobs.manchester.ac.uk/Job/JobDetai...
jobs.manchester.ac.uk
'Research Associate in Microbiome Ecology:Manchester
We wish to appoint a PostDoctoral Research Associate to an exciting project exploring the assembly, stability and function of microbial decomposer communities.
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