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saligramalab.bsky.social

@saligramalab.bsky.social
588 followers 359 following 487 posts

#TCR and #human diseases “We are all smart. Distinguish yourself by being kind.”—Charles Gordon. Studying T cells in brain doesn't make me a neuroimmunologist!

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saligramalab.bsky.social @saligramalab.bsky.social · 11/09/2026
Unfortunately they don’t express gdTCR
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saligramalab.bsky.social @saligramalab.bsky.social · 10/09/2026
How welcoming are gdTcell folks -we have an amazing story brewing on double negative abT cells -which are MHC independent? Thinking of putting an abstract
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Reposted by @saligramalab.bsky.social
Payal Yokota @payalyokota.bsky.social · 10/09/2026
Excited about the upcoming 12th #GDTcell conf in Wrocław (May, 2027) hosted by Grzegorz Chodaczek. Pls RT! Yours truly will serve again as part of the Sci Committee. 🔖 12gammadelta.port.org.pl. Updates here, #GDTcellclub series, @forum-gd.bsky.social. @clairemci.bsky.social @eberlmat.bsky.social
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saligramalab.bsky.social @saligramalab.bsky.social · 09/09/2026
#continues "When you get these jobs that you have been so brilliantly trained for, just remember that your real job is that if you are free, you need to free somebody else. If you have some power, then your job is to empower somebody else. This is not just a grab-bag candy game" by #ToniMorrison
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saligramalab.bsky.social @saligramalab.bsky.social · 09/09/2026
#officially #promoted to #Associate #Professor. Incredibly thankful to all, looking forward to the future (more soon!). I still remember getting off of flight from India on August 12th, 2006 and starting PhD at University of Vermont, a defining moment in my life! thankful for incredible opportunity.
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saligramalab.bsky.social @saligramalab.bsky.social · 03/09/2026
"May be" is the key here!
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saligramalab.bsky.social @saligramalab.bsky.social · 03/09/2026
#For #TCR #Lovers look at this #great paper @pgtimmune.bsky.social Uneven TCR chain pairing constraints govern epitope recognition | Science www.science.org/doi/10.1126/...
science.org
Uneven TCR chain pairing constraints govern epitope recognition
Combinatorial pairing of independently recombined T cell receptor (TCR) α- and β-chains is central to diversifying the TCR repertoire. Although sequence motifs in one chain correlate with epitope reco...
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saligramalab.bsky.social @saligramalab.bsky.social · 02/09/2026
Generate data -not for the sake of generating data. Have a question to address -experiment -generate data -follow up with experimentation
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saligramalab.bsky.social @saligramalab.bsky.social · 02/09/2026
I really would like to know -what they found here? www.cell.com/cell/fulltex...
cell.com
Tabula Sapiens 2.0: A comprehensive transcriptomic atlas of human cell types
An expanded atlas of human cells maps the expression of nearly all human transcription factors across 701 cell-type/tissue combinations and uncovers the heterogeneous nature of senescence across tissu...
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saligramalab.bsky.social @saligramalab.bsky.social · 31/08/2026
Our lab anticipate having #two #postdoctoral #positions starting beginning/late summer #2027. We are searching for candidates with #Tcell #expertise #protein #engineering and #ThymicTcellDevelopment.
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saligramalab.bsky.social @saligramalab.bsky.social · 31/08/2026
can someone please explain to me - are there alpha beta TCRs -which are non peptideMHC restricted in the periphery? Are they selected on peptideMHC in thymus? really intrigued by these two www.sciencedirect.com/science/arti... and www.sciencedirect.com/science/arti...
sciencedirect.com
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saligramalab.bsky.social @saligramalab.bsky.social · 31/08/2026
Cause and effect in Biology... @itaiyanai.bsky.social you may find it interesting www.science.org/doi/10.1126/...
science.org
Cause and Effect in Biology
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Reposted by @saligramalab.bsky.social
Science Magazine @science.org · 13/08/2026
Exclusive: Recently discovered genetic variants seem to protect against Alzheimer’s disease, suggesting a path toward a cure. But are their powers believable? scim.ag/461ljIS
scim.ag
Science investigation casts doubt on genes hailed for warding off Alzheimer’s disease
Mutations found in Colombian families raised hopes for treatments. Altered patient data and suspect images call their benefits into question
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saligramalab.bsky.social @saligramalab.bsky.social · 13/08/2026
Happy to share this #collaborative paper in @pnas.org www.pnas.org/doi/10.1073/...
pnas.org
A tonsil organoid model reveals Epstein–Barr virus–infected germinal center B cell states during primary infection | PNAS
Epstein–Barr virus (EBV) colonizes secondary lymphoid tissues to establish persistent infection and is strongly associated with malignancy and auto...
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saligramalab.bsky.social @saligramalab.bsky.social · 07/08/2026
whoever the reviewer was, I thank them immensely. This was for an R01 that went to study section few wks ago. I have never seen a reviewer (so far), who gave such great comments/critiques -which I truly believe makes the grant/proposal better. So #thank #you for this #reviewer.
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saligramalab.bsky.social @saligramalab.bsky.social · 29/07/2026
As the study section meets -our fate is sealed for this grant, I guess it was sealed the moment I submitted the grant.
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saligramalab.bsky.social @saligramalab.bsky.social · 25/07/2026
my quote for the day @jeremymberg.bsky.social "If the key to novel scientific discovery in biology was that simple, pigs would fly"
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saligramalab.bsky.social @saligramalab.bsky.social · 08/07/2026
This is a #great #initiative from @WashU @washumedicine @WashUOTM #Third #Coast #Foundry "The future of WashU innovation doesn’t stop in St. Louis. It scales in San Francisco." source.washu.edu/2026/03/wash...
source.washu.edu
WashU joins Third Coast Foundry
Washington University in St. Louis is an inaugural member of Third Coast Foundry, a new initiative designed to strengthen the combined presence of Midwestern universities in the San Francisco Bay Area...
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saligramalab.bsky.social @saligramalab.bsky.social · 06/07/2026
@nobelprize.org Nobel laureate leaves @ucberkeleyofficial.bsky.social and takes position at @tsinghuauniversity.bsky.social what a loss www.tsinghua.edu.cn/en/info/1244...
tsinghua.edu.cn
​Nobel Laureate in Chemistry Omar M. Yaghi joins Tsinghua University full-time-Tsinghua University
​On the morning of July 3, Tsinghua University held the Appointment Ceremony for Professor Omar M. Yaghi as Chair Professor of Tsinghua University at the Main Building.
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saligramalab.bsky.social @saligramalab.bsky.social · 01/07/2026
Most exciting day for Julia for her graduate career -what an #exciting #result!
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saligramalab.bsky.social @saligramalab.bsky.social · 15/06/2026
I will be here, attending and giving a talk -if potential #postdocs would like to have a conversation, please let me know #KSNeuroInflam26 www.keystonesymposia.org/conferences/...
keystonesymposia.org
Neuroinflammation in Health and Disease | Keystone Symposia
Join us at the Keystone Symposia on Neuroinflammation in Health and Disease, June 2026, in Whistler, with field leaders!
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saligramalab.bsky.social @saligramalab.bsky.social · 09/06/2026
@bsky.app seems to have become #cloudysky for #science #social
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saligramalab.bsky.social @saligramalab.bsky.social · 08/06/2026
for those who #dont #believe in the #existence of #CD8 #Regulatory #cells -here is a #clear #evidence -they #DO exist and are #regulatory www.nature.com/articles/s41...
nature.com
GPR15-guided CD8+ T regulatory cells control intestinal inflammation - Nature
Nature - GPR15-guided CD8+ T regulatory cells control intestinal inflammation
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saligramalab.bsky.social @saligramalab.bsky.social · 08/06/2026
if you are attending @focisimmunology.bsky.social immunology #FOCIS2026 please stop by Tony Yao's (MSTP student from our lab) #talk on "Endogenous Activation of CD8+ T cells is Jointly Constrained By a MYB-dependent Program and Fas/FasL-mediated Deletion" Thursday, June 11, 4:30PM
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saligramalab.bsky.social @saligramalab.bsky.social · 05/06/2026
This is what I call #combination of #artistry #science #romanticism on #Germinal #centers (I know I am a #Tcell fanatic!)-cool paper by @victora.bsky.social www.sciencedirect.com/science/arti...
sciencedirect.com
Replaying germinal center evolution on a quantified affinity landscape
Darwinian evolution of immunoglobulin genes within germinal centers (GCs) underlies the progressive increase in antibody affinity following antigen ex…
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saligramalab.bsky.social @saligramalab.bsky.social · 04/06/2026
Thrilled to be part of this study #melanoma #oncolytic #virus @washumedicine.bsky.social @davechenlab.bsky.social san.com/cc/clinical-...
san.com
Clinical trial keeps Stage 4 skin cancer victim alive years after ‘four months to live’
What began as a small, hard-to-see mole on her ankle became a life-threatening battle with Stage 4 melanoma.
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saligramalab.bsky.social @saligramalab.bsky.social · 01/06/2026
Another #grant cycle #another #grant #submitted
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saligramalab.bsky.social @saligramalab.bsky.social · 28/05/2026
This is #wild and #fascinating -"Homing pigeon navigation relies on superparamagnetic macrophages under overcast conditions" www.science.org/doi/10.1126/...
science.org
Homing pigeon navigation relies on superparamagnetic macrophages under overcast conditions
Birds use a variety of navigational strategies, including the geomagnetic field, especially when other cues are not available, such as under overcast or nocturnal conditions. Magnetite particles in th...
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saligramalab.bsky.social @saligramalab.bsky.social · 27/05/2026
written in #2016 -holds true #today "The #Unaimed #Arrow #Never #Misses" www.sciencedirect.com/science/arti...
sciencedirect.com
The Unaimed Arrow Never Misses
In this assay, Raphael Kopan argues that focused emphasis on disease and translation stifles innovation, and outline the reasons why, in my opinion, d…
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saligramalab.bsky.social @saligramalab.bsky.social · 26/05/2026
well, thats a good news for us "It is my pleasure to inform you that #United #States #Patent No. 12,636,317 issued on May 26, 2026" ->"Manipulation and Use of Antigen-Specific Regulatory T Cells"
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saligramalab.bsky.social @saligramalab.bsky.social · 25/05/2026
This is sad “Due to #administrative changes to funding opportunity processing and delays in approvals, the FY2026 Early Independence Award Funding Opportunity will not go forward” Funding Opportunity | NIH Common Fund @NIH commonfund.nih.gov/earlyindepende…
commonfund.nih.gov
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saligramalab.bsky.social @saligramalab.bsky.social · 19/05/2026
Asking for #help -has anyone tried or #recommend #commercial #crystallography company for #TCR-#peptide #MHC, specifically mouse class II (I-Ab) with self peptide and #CD4 #TCR.
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saligramalab.bsky.social @saligramalab.bsky.social · 14/05/2026
I am #ecstatic to hear that #TonYao #MSTP student in the lab -will be giving an #oral #presentation on #Myb/TCR #dependent #Tcells at @focisimmunology.bsky.social ->he has done a great amount of work on double co-receptor negative #Tcells
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saligramalab.bsky.social @saligramalab.bsky.social · 13/05/2026
An #incredible #gift from #Bursky -WashU receives $200M commitment for public health @WashU @washumedicine source.washu.edu/2026/05/wash...
source.washu.edu
WashU receives $200M commitment for public health
The largest gift in Washington University in St. Louis history, from the Bursky Family Foundation, will advance the School of Public Health’s vision in a post-pandemic world.
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saligramalab.bsky.social @saligramalab.bsky.social · 07/05/2026
Well, again -for the lovers of #TCRs and #crossreactivity #Reverse #engineering the fatally #crossreactive #A3A #TCR to decouple potency and #specificity @theRafLab @CAMS_COI_Ox www.biorxiv.org/content/10.6...
biorxiv.org
Reverse engineering the fatally cross-reactive A3A TCR to decouple potency and specificity
T cell receptor (TCR) affinity enhancement can introduce off-target cross-reactivity with life-threatening consequences, as illustrated by the MAGE-A3-specific A3A TCR, which caused fatal cardiotoxicity through recognition of a Titin-derived peptide. Here, we reconstructed the crossreactivity landscape by reverse-engineering A3A toward its wild-type precursor, generating intermediate variants in which engineered CDR2α residues are systematically reverted to the wild-type sequence. Reverting just two engineered residues yields a receptor, v9, that retains MAGE-A3 cytotoxicity comparable to A3A while eliminating Titin and other acquired cross-reactivities. Structurally, these substitutions reduce CDR2α-MHC contacts and disrupt an intra-TCR CDR2α-CDR3β interaction, propagating conformational changes across CDR3 loops that reshape peptide engagement without altering docking geometry. These results demonstrate that mutations outside the peptide-contacting CDR3 loops can allosterically reconfigure antigen specificity and establish simple stepwise reverse engineering to wild-type as a strategy for correcting TCR cross-reactivity. ### Competing Interest Statement The authors have declared no competing interest. Chinese Academy of Medical Sciences (CAMS) Innovation Fund for Medical Science (CIFMS), China, 2018-I2M-2-002 and 2024-I2M-2-001-1 Cancer Research UK (CRUK) DPhil in Cancer Science Award, C2195/A31310, CANCTA-2024/100004 Wellcome Trust, https://ror.org/029chgv08, 227585/Z/23/Z, 227388/Z/23/Z Cancer Research UK, DRCCIP-Nov23/100004 Engineering and Physical Sciences Research Council, https://ror.org/0439y7842, EP/S024093/1 Biotechnology and Biological Sciences Research Council, BB/T008784/1 Wellcome Trust Core Award, 203141/Z/16/Z Novo Nordisk Foundation Postdoctoral Fellowship, NNF23OC0082912 Gates Foundation, INV-055780 CSC-COI MD/PhD High-level Medical Innovative Talent Scholarship, 2024-I2M-2-001-1 ARISE Fellowship - Marie Skłodowska-Curie Actions, 945405
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saligramalab.bsky.social @saligramalab.bsky.social · 05/05/2026
By the way you are starting here soon. Correct? we should catch up.
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saligramalab.bsky.social @saligramalab.bsky.social · 05/05/2026
Exactly is the point -observations in LCMV too much extrapolated to T cell responses in cancer.
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saligramalab.bsky.social @saligramalab.bsky.social · 05/05/2026
May be it’s #controversial to ask this #question “how the #chronic #LCMV model is #equivalent to #studying #T #cell #exhaustion in #cancer”
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saligramalab.bsky.social @saligramalab.bsky.social · 05/05/2026
Let me have a look. Thanks
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saligramalab.bsky.social @saligramalab.bsky.social · 05/05/2026
Will DM soon. We are getting good enough transduction. We would like if possible a company to make a high tittered virus!
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saligramalab.bsky.social @saligramalab.bsky.social · 04/05/2026
Asking for #help or #recommendation Is there a company for #AAV for knocking in a #TCR of interest into #HSCs. Please let us know. #AAV #vectors
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saligramalab.bsky.social @saligramalab.bsky.social · 30/04/2026
CSR expects to create 52 new chartered study sections to manage the review of R01 applications previously handled by funding ICs. grants.nih.gov/news-events/ni…
grants.nih.gov
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saligramalab.bsky.social @saligramalab.bsky.social · 25/04/2026
I hope people listening to this talk appreciate -#2D2 #TCR is not a representative #TCR as one thought and appreciate the beauty of reactivity of almost #1000 #MOG #specific #TCRs < #real #world #data helping #modeling that all wants to do!!
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saligramalab.bsky.social @saligramalab.bsky.social · 24/04/2026
I am #ecstatic hear that #Chandrani Thakur, #postdoc in the lab -her abstract has been selected for a #talk at #Gordon #Research #conference "2026 Immune Circuitry and Molecular Pathways in Tissue Homeostasis, Infection, and Disease"
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saligramalab.bsky.social @saligramalab.bsky.social · 22/04/2026
#Absolute #disaster #save #scientists #curiosity 10,000 scientists gone: Trump’s cuts create an unprecedented brain drain geneticliteracyproject.org/2026/04/21/1... via @GeneticLiteracy
geneticliteracyproject.org
10,000 scientists gone: Trump’s cuts create an unprecedented brain drain
Some 10,109 doctoral-trained experts in science and related fields left their jobs last year as President Donald Trump dramatically shrank the
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saligramalab.bsky.social @saligramalab.bsky.social · 17/04/2026
Well Avi is #inducted to our #team with this good #pMHC #monomer prep with a little help from Julia
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saligramalab.bsky.social @saligramalab.bsky.social · 17/04/2026
Programmable cellular protein factories | Science www.science.org/doi/10.1126/...
science.org
Science | AAAS
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saligramalab.bsky.social @saligramalab.bsky.social · 17/04/2026
B lymphocyte protein factories produced by hematopoietic stem cell gene editing | Science www.science.org/doi/10.1126/...
science.org
Science | AAAS
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Reposted by @saligramalab.bsky.social
Eric Topol @erictopol.bsky.social · 15/04/2026
How did COVID mRNA vaccines improve favorable responses and patient outcomes for cancer immunotherapy? www.nature.com/articles/s41... A new report today on the priming of CD8+ T cells by these vaccines, a likely explanation www.nature.com/articles/s41...
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saligramalab.bsky.social @saligramalab.bsky.social · 15/04/2026
Here is that #paper @Nature #mRNA #vaccines engage unconventional pathways in #CD8+ #Tcell #priming #KenMurphy #SuinJo #ChandraniThakur @WashUNeurology @washumedicine www.nature.com/articles/s41...
nature.com
mRNA vaccines engage unconventional pathways in CD8+ T cell priming - Nature
mRNA–lipid-nanoparticle vaccines do not require type 1 conventional dendritic (cDC1) cells or the WDFY4-dependent cross-presentation pathway for CD8+ T cell priming but, instead, engage both cDC1 and ...
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