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Putri Prasetyaningrum

@putriningrum.bsky.social
242 followers 329 following 28 posts

🇮🇩(Indonesian) in 🇩🇪 Interested in protein🤝protein, Light and Gibberellin signalling, plant environmental adaptation, cat🐈‍⬛, music🎸 , history🏛️, anthropology🙇

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Reposted by Putri Prasetyaningrum
EMBL @embl.org · 21/09/2026
There is still time to apply for the EMBL International PhD Programme! 📢 Don’t miss this opportunity to receive dedicated mentoring while doing interdisciplinary research. Research groups across EMBL are recruiting now! bit.ly/4x9Edss
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Current Biology @currentbiology.bsky.social · 17/09/2026
New #cat just dropped! 😻 A first in over 100 years, a genomic study in CB by Eduardo Eizirik and team reveals a new species of 'tiger cat'. 👉 www.cell.com/current-biol... Meet the Tilcayo (Leopardus tilcayo)! (photo: Fernando Faciole/National Geographic) #cats
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Kasper van Gelderen @kaspervangelderen.bsky.social · 13/09/2026
Freddy Igiebor, a master student in the lab, used the tools developed in our lab to perform live and fixed imaging of phyB photobodies. Together with the help of Isabella Graf and Laeschkir Würthner, from the EMBL, he began to investigate the biophysical properties of phyB photobodies.
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Kasper van Gelderen @kaspervangelderen.bsky.social · 13/09/2026
phyB photobodies can have different properties between light conditions and cell types, and so can form molecular memory by retaining signaling biomolecules. phyB photobodies delay and modify light signalling events, so that the plant can react to light when it needs to, and not when it is forced to
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Kasper van Gelderen @kaspervangelderen.bsky.social · 13/09/2026
This paper was presented at the ISPP in Switzerland last week, just after the presentation of Meng. Our paper deals on how plant phytochrome B (phyB) photoreceptors, which are crucial environmental sensors of light quality and quantity, can form molecular condensates, called phyB photobodies.
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Kasper van Gelderen @kaspervangelderen.bsky.social · 13/09/2026
and has touched the work and lives of many of my colleagues. It’s a surreal experience that he is no longer there as a colleague, and he will be greatly missed. I want to dedicate this paper to his memory, and can only wish his close friends and family all the strength to deal with this sudden loss.
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Kasper van Gelderen @kaspervangelderen.bsky.social · 13/09/2026
The first preprint of my lab has just come out doi.org/10.64898/202... This paper came out at the same day on the sudden passing of Prof. Meng Chen. Without his work, this paper would not have existed. He was an extremely supportive member of the plant photobiology community..
doi.org
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Andreas Hiltbrunner @plantphotobiology.bsky.social · 11/09/2026
Congratulations to Laura Schmid from our lab for winning the poster prize at the Plant Photobiology meeting (ISPP 2026) in Les Diablerets (CH). Well done!
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Mariana Schuster @marischuster.bsky.social · 07/09/2026
I'm excited to share that my newly funded #ERCStG FRONTERA is recruiting two postdoctoral researchers at @ipbhalle.bsky.social 🌱🔬 If you are passionate about plant immunity, proteolysis, membrane proteins, or proteomics, I'd love to hear from you. 🧵 Please RT/share!
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Martin Balcerowicz @transcription.bsky.social · 27/08/2026
Glad to be hosting the #Thermomorphogenesis 2026 meeting at @dundee.ac.uk, with 3 days full of exciting research and discussions about recent advances in plant temperature responses. Very happy to be part of such a supportive community!
Photo of Thermomorphogenesis 2026 attendees in front the conference banner
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SNP2Prot @snp2prot.bsky.social · 13/08/2026
Mark your calendars‼️ The SNP2PROT team hosts the "Plant Genetic Variation meets Protein Architecture" international conference, 21-23 June 2027, at the Leopoldina, Halle (Saale). Join us for interdisciplinary discussions, coffee and networking! Registration opens: 17th October, 2026 ⏰ #SNP2Prot
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Bayer lab @bayerlab.bsky.social · 11/08/2026
Our latest preprint is online. www.biorxiv.org/content/10.6... Our exciting data show that embryonic patterning in Arabidopsis is kick-started by differential sensitivity towards auxin and not by differential distribution of auxin.
biorxiv.org
Before auxin distribution matters: Prepatterning of the Arabidopsis embryo axis by MPK6-dependent AUX/IAA8 phosphorylation
In growth and development of plants, the signaling molecule auxin plays an instrumental role. Many patterning processes are controlled by auxin signaling in a self-organizing matter. After fertilizati...
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Yadhusankar Sasidharan @yadhusankar.bsky.social · 11/08/2026
Excited to share the latest preprint from #TimingLab where we report the presence of maturing Guard Cells at the tip of the cotyledons in the ERECTA triple mutant embryos as early as 6 DAP!! Read more👇
er erl1 erl2 mutant developing embryo expressing FAMA at the tip of the cotyledon
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Dominique Bergmann @stanfordstomata.bsky.social · 10/08/2026
1/9 🧵New preprint from the lab! A midpoint in a long journey to understand specificity among bHLH transcription factors in plants. Part IV: how does an accessory domain guide specificity of heterodimerizing bHLHs? #PlantSci #TranscriptionFactors #stomata www.biorxiv.org/cgi/content/...
biorxiv.org
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Ronald Pierik @ronaldpierik.bsky.social · 25/07/2026
Many credits to @lisaoskam.bsky.social and Sanne Matton.
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Putri Prasetyaningrum @putriningrum.bsky.social · 23/07/2026
Leaves absorb red and reflect far-red, so a close neighbour enriches the spectrum in far-red. Phytochrome B detects this; the plant elongates. Gibberellin is required. Its three receptors are not interchangeable — only one responds to far-red. A preprint thread: tinyurl.com/y5jyy9zc 🌱
"The Receptor Who Was Not Redundant"
Functional specialization of the gibberellin receptor GIBBERELLIN-INSENSITIVE DWARF 1C in plant neighbour detection
Prasetyaningrum et al, 2026
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Björn Usadel @usadellab.bsky.social · 23/07/2026
Join my group at @fz_juelich within the @ceplas.bsky.social excellence cluster. #PlantJobs We’re looking for a postdoc/senior scientist in plant single-cell and spatial transcriptomics recruiting.fz-juelich.de/jobposting/8...
recruiting.fz-juelich.de
Postdoctoral Researcher / Senior Scientist in the field of plant single-cell and spatial transcriptomics
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Sarah Courbier @scourbier.bsky.social · 29/06/2026
I've got something to "TORC" about! 😅 After 4 years building this project at @biologyunifreiburg.bsky.social, I'm so excited to share that my first independent preprint is now online! ✨ I hope you like it: doi.org/10.64898/202... A short thread... 🧵 #PlantSci #PlantScience
doi.org
The TARGET OF RAPAMYCIN (TOR) kinase controls shade-mediated hypocotyl elongation responses in Arabidopsis.
Plants perceive neighboring vegetation through an enrichment of far-red light (shade) in the environment. These changes in light quality trigger molecular and physiological responses aimed at outgrowi...
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Putri Prasetyaningrum @putriningrum.bsky.social · 16/05/2026
#Caturday Picasso chilling on his watch tower (a.k.a DIY cat stairs)
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Sjon Hartman @hartman-plantlab.com · 05/05/2026
So happy and proud to share our lab’s first #plantscience research article, revealing that angiosperms have the capacity to encode memory of flooding stress. A heroic effort by @aidamaric.bsky.social in collaboration with @djgibbs.bsky.social and others. A brief 🧵 www.biorxiv.org/content/10.6...
biorxiv.org
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Şuayb Üstün @suaybuestuen.bsky.social · 24/04/2026
🚨 Paper out now in #ScienceAdvances @science.org 🌱🦠 Pathogens don’t just target protein degradation—they also hijack host translation. "Bacteria use P-body condensates to attenuate host translation during infection" ⚖️♻️ led by @manuelgonzalezfuen.bsky.social www.science.org/doi/10.1126/...
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Vinay Shukla @vinayshukla.bsky.social · 19/04/2026
It worked (after testing an ungodly number of combinations, see supp.)! Three human-derived modules, PHD3, SLY-VHL, HIFODD, form a fully functional O2-dependent proteolysis system in Arabidopsis. We could degrade reporters, TFs, even fluorescent proteins, all reversibly controlled by oxygen levels.
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Khaled_Selim Lab @selimlab.bsky.social · 15/04/2026
#joboffer #Germany plz spread it I'm hiring a Junior leader (E13; 100% for 3-5 y) to start own independence w/ focus on #CryoEM SPA or ET Ideally 1-2y postdoc experience Plz get in touch, if you are interested in #Structural biology & #MicroBiochem @sfb1381.bsky.social @vaam-microbes.bsky.social
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The Sainsbury Laboratory @thesainsburylab.bsky.social · 08/04/2026
New Publication: A secreted citrus protease cleaves an outer membrane protein of the Huanglongbing pathogen (2026) www.tsl.ac.uk/publications/166327
doi.org
PNAS: A secreted citrus protease cleaves an outer membrane protein of the Huanglongbing pathogen (2026)
Plants secrete a variety of proteases as a defense response during infection by microbial pathogens. However, the relationship between their catalytic activities and antimicrobial functions remains largely unknown. Particularly, few biologically relevant substrates of these proteases have been identified. Huanglongbing (HLB) has been a major threat to the citrus industry worldwide. The HLB-associated bacterium, "Candidatus Liberibacter asiaticus" (Las), was previously shown to deploy an inhibitor of papain-like cysteine proteases (PLCPs) to promote disease in citrus. In this study, we identified an outer membrane protein (OMP) of Las, LasOMP1, as a substrate of the citrus PLCP CsRD21a. LasOMP1 is one of the most highly expressed genes in Las. CsRD21a cleaves LasOMP1 and produces cleaved peptide products, which could be detected in vitro and in HLB-diseased citrus plants. We found that CsRD21a targets the N-terminal portion of LasOMP1, potentially at an extracellular loop region. Importantly, transgenic sweet orange overexpressing CsRD21a showed reduced Las populations and improved plant growth, highlighting that engineering this protease is a promising strategy to enhance HLB resistance in citrus. Together, our work reveals a pathogen-derived substrate of plant PLCPs and suggests bacterial OMPs may be direct targets of plant defense.
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Torii Lab @stomata-tweets.bsky.social · 26/03/2026
Published! From a proteomic atlas of the ERECTA signaling network, we show that receptor kinase endocytosis is essential for proper stomatal patterning. Congrats, Pengfei, @edwardmarcotte.bsky.social, @hhmi-science.bsky.social, @texasscience.bsky.social & co-authors! www.science.org/doi/10.1126/...
science.org
Comparative proteomic profiling of receptor kinase signaling reveals key trafficking components enforcing plant stomatal development
Proteomic mapping uncovers endocytosis adaptors that drive receptor internalization for robust stomatal development.
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Marco Trujillo @trujillolab.bsky.social · 24/03/2026
Interesting paper on the degradation of DELLAS (gibberellin pathway) by a plasma membrane localized E3 ubiquitin ligase to regulate growth under C/N imbalance #proteostasis academic.oup.com/plcell/artic...
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MolPlantSci @molplantsci.bsky.social · 19/03/2026
And the This year’s winner of the Reinhold-von-Sengbusch prize for best Talk are: - Susanne Mühlbauer - LMU Munich - Jakob Weber Böhlen - RWTH Aachen University - Jan Multhoff – University Münster #MBP2026
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MolPlantSci @molplantsci.bsky.social · 19/03/2026
And here are this year’s winners of the Reinhold-von-Sengbusch prize for best Poster are: - Gali Araguirang - University Hamburg - Sophie Farkas - University Freiburg - Nazanin Mahouram Mashhadi - University Berlin #MBP2026
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MolPlantSci @molplantsci.bsky.social · 19/03/2026
The Plant Journal Award 2026 goes to - Josephine Herbst - MLU Halle #MBP2026
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MolPlantSci @molplantsci.bsky.social · 19/03/2026
The Agrisera Talk Award 2026 goes to - Johanna E. M. Dickmann - ENS de Lyon #MBP2026
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German Society for Plant Sciences (DBG) @plantsciencedbg.bsky.social · 18/03/2026
Congratulations! 👏 Marco @trujillolab.bsky.social receives this year‘s #SciComm Award of our @molplantsci.bsky.social for his long-term, consistent + clear presentation in social media. Read more about the award and his tips for #ECRs www.pflanzen-molekularbiologie.de/en/sci-comm#... #MBP2026
pflanzen-molekularbiologie.de
Our SciComm Award for excellent science communication
Our SciComm Award and other news from science communication
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Carolin Delker @carolindelker.bsky.social · 17/03/2026
@putriningrum.bsky.social presenting her work on GA at #MBP2026
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Ghent Rooting-lab/Steffen Vanneste @stvanneste.bsky.social · 13/03/2026
#Ligand-binding site predictor 😎 www.nature.com/articles/s41...
nature.com
AF2BIND: predicting small-molecule binding sites using the pair representation of AlphaFold2 - Nature Methods
AF2BIND is a logistic regression model trained on AlphaFold2 pair features to predict small-molecule binding-site residues in proteins, without multiple sequence alignments, homology models or knowled...
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Laura Ragni @lauraragni.bsky.social · 09/03/2026
🚨 PhD Position in Plant Molecular Biology 🌱 We are looking for a motivated PhD student to join our team to study root protective barriers. If you are interested in confocal microscopy, cell wall biology, and plant development, this project might be for you! Please share! #PlantScience #PlantSciJob
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Sascha Laubinger @saschalaubinger.bsky.social · 04/03/2026
Excited to share our latest preprint. Arabidopsis thaliana has been the leading model for plant genetics - but most of what we know comes from growth chambers. Can this model also help us understand how climate shapes plants in the wild and reveal gene functions under real environmental variability?
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The Arabidopsis Information Resource (TAIR) @tairnews.bsky.social · 19/02/2026
🎉📣 #TAIR12, the latest reannotation of the Arabidopsis thaliana genome, is now available under accession number PRJEB100887 on ENA and NCBI! Thank you all the volunteer researchers whose hard work has made this possible! #plantscience #plantbiology 🧪 bit.ly/3ZHtneT
bit.ly
Announcing the publication of TAIR12: Consult the fully reannotated genome on the European Nucleotide Archive - Phoenix Bioinformatics
TAIR (The Arabidopsis Information Resource), together with our nonprofit host Phoenix Bioinformatics, is pleased to announce the public release of TAIR12
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Putri Prasetyaningrum @putriningrum.bsky.social · 17/02/2026
Welcome back (stronger), thalemine! @bar-plantbio.bsky.social
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Vinay Shukla @vinayshukla.bsky.social · 21/01/2026
PhD opportunity in the newly minted RO2T Respiration Group! Please share! Interested in root biology, oxygen dynamics, imaging & modelling? We’re recruiting a PhD student at the University of Nottingham. Deadline 15th February. jobs.nottingham.ac.uk/Vacancy.aspx... #plantscijobs #plantscience
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Sascha Laubinger @saschalaubinger.bsky.social · 19/12/2025
Are you an experienced PhD student or postdoc in plant science looking to connect, present your work, and discuss career paths? Join us at the 3rd Early Career Plant Researchers Network Meeting, Halle (Saale), 20–21 April 2026 Deadline: 23 January 2026 plant-ecr-networking.eu
Poster announcing the 3rd Early Career Plant Researchers Network Meeting, held 20–21 April 2026 in Halle (Saale), Germany. The event targets experienced PhD students and postdoctoral researchers in plant science and features scientific talks, career development and grant-writing workshops, and networking. Travel and accommodation are covered, and participants are registered for the 11th Leibniz Plant Biochemistry Symposium (22–24 April 2026). Application deadline: 23 January 2026. Website: plant-ecr-networking.eu.
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hans-van-veen.bsky.social @hans-van-veen.bsky.social · 17/10/2025
Stoked to share our review advocating a whole plant perspective on resource balancing strategies with Joe Earle, Lucila Salvatore, Bas van den Herik and Kirsten ten Tusscher How coupling resources and development ensures whole plant homeostasis url: academic.oup.com/jxb/article/...
academic.oup.com
Validate User
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eLife @elife.bsky.social · 05/10/2025
English is the dominant language of science. Does this help us share knowledge? Or does it further exclude the already excluded? This webinar looks back at the colonial past of science communication and how we can better embrace multilingual science: buff.ly/5f2uPQi
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Putri Prasetyaningrum @putriningrum.bsky.social · 04/07/2025
Just submitted my first PI grant proposal – what a wild ride! It got me wondering about something specific: for those of you in plant science, what did grant proposals look like back in the late '90s or early 2000s? #writing #proposal
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Margot Smit @likeyoda1.bsky.social · 05/06/2025
We're looking for a new PhD candidate to join the lab. Please share 🌱😄
A PhD position (initially 3 years) is available in our laboratory in the Center for Plant Molecular Biology (ZMBP), at the University of Tübingen (Germany). The position is available with an intended start date starting January 2026.
Interested applicants should submit a single PDF comprising a motivation letter describing your research interests, an up-to-date CV, and the names and contact information for 2 references to timing.lab@zmbp.uni-tuebingen.de ideally before July 21st.
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Molecular Plant & Plant Communications @mplantpcom.bsky.social · 30/05/2025
ERFVIIs as transducers of oxygen-sensing in the evolution of land plant response to hypoxia #research #MolecularPlant cell.com/molecular-pl...
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The Arabidopsis Information Resource (TAIR) @tairnews.bsky.social · 06/05/2025
The TAIR12 genome reannotation has FINALLY been submitted to GenBank. Now we await review and approval. Stay tuned for updates, hopefully within the next month. Thank you to everyone that made this project possible. @labschneeberger.bsky.social @bar-plantbio.bsky.social @sigmafacto.bsky.social
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Stephan Wagner @stephanwagner.bsky.social · 21/04/2025
A growing list of genetically encoded biosensors helps to shine light on plant metabolism. We reviewed - also for the non-expert - available probes and recent advances in the field: www.sciencedirect.com/science/arti...
Scheme how genetically encoded biosensors can shine light on plant metabolism. Intrinsic sensors bind their analyte directly, extrensic sensors require a sensing domain fused to one, or more, fluorescent proteins. In paraplexing experiments, multiple sensors are individually expressed in plants and their responses are recorded in parallel. In multiplexing experiments, two or more sensors with non-overlapping excitation and emission spectra are expressed in the same plant. Sensor responses, either recorded in paraplexing or multiplexing experiments over time and through appropriate instruments, such as fluorescence microscopes or plate readers, can be used to create increasingly complex metabolic networks.
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Carolin Delker @carolindelker.bsky.social · 11/03/2025
We are looking for a postdoc to study the impact of interspecific variation of ELF3 at the #mlu-halle within the EU-funded research consortium #ValuePlant. www.verwaltung.uni-halle.de/dezern3/Auss... Please share within your networks!
verwaltung.uni-halle.de
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Şuayb Üstün @suaybuestuen.bsky.social · 04/03/2025
I will post this again, cause it is important more than ever: #Inclusion,#diversity& #equality have also become integral in academia.It has deeply impacted my life.I have felt (still feel) the weight of not fitting in & feeling misunderstood @academic-chatter.bsky.social #AcademicChatter #DEI 🧵(1/6)
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Putri Prasetyaningrum @putriningrum.bsky.social · 13/02/2025
Shout out to house dj @rensingstefan.bsky.social @maizel-lab.org #mbp2025
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Putri Prasetyaningrum @putriningrum.bsky.social · 13/02/2025
Past midnight and it's still going strong #mbp2025
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