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nstoesser.bsky.social

@nstoesser.bsky.social
67 followers 68 following 18 posts
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Bash the bug @bashthebug.net · 03/09/2026
Microbiology is coming out of the lab! Infusoria, a new exhibition by MMM Artist-in-Residence Anna Dumitriu, runs in the JR Hospital from 26 Sept–6 Nov 2026. New works inspired by Oxford research explore hospital sinks, wastewater, water microbiomes and antimicrobial resistance.
bashthebug.net
When microbiology becomes art: Infusoria
Infusoria 26 September – 6 November 2026Artlink Corridor Gallery, John Radcliffe Hospital, Oxford From hospital sinks to BioArt: our microbiology research inspires new exhibition Infusoria What does the microbial world of a hospital sink look like when viewed not only through the lens of microbiology, but through art? Research from Modernising Medical Microbiology (MMM) at the University of Oxford…
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nstoesser.bsky.social @nstoesser.bsky.social · 25/02/2026
Hoping to innovate community population-level AMR surveillance with the ALARUM team bmjopen.bmj.com/content/16/2.... Can we use metagenomics of pooled colonisation samples to predict clinical AMR burden & inform antimicrobial guidelines?
bmjopen.bmj.com
ALARUM: Active One Health surveillance in LMICs to monitor and predict Antimicrobial Resistance Using Metagenomics – a cross-sectional study protocol
Background In rural sub-Saharan Africa (sSA), the burden of antimicrobial resistance (AMR) remains high. As AMR continues to rise, there is a strong need for practical, implementable surveillance to m...
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nstoesser.bsky.social @nstoesser.bsky.social · 24/02/2026
Are you a post-doctoral microbiologist interested in characterising bacterial resistance evolution and want to apply your knowledge and expertise to developing new therapeutics for Klebsiella (and other Enterobacterales) infections? Then we need you! Apply now bit.ly/3MX39Ce close date March 13th 👀
my.corehr.com
Job Details
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Reposted by @nstoesser.bsky.social
Alasdair Hubbard @dralhubb.bsky.social · 21/01/2026
🚨 Fully‑funded PhD for Home Students🚨 We'll explore non-antibiotic alternatives in relatistic environments, uncovering how they work, if they affect antibiotic activity and whether they influcence AMR acquistion. Come join a wonderful supervisory team! #MicroSky #UTISky #AMar tinyurl.com/38u552bu
tinyurl.com
Optimising the use of alternative therapies for the treatment of urinary infections - The University of Nottingham
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Reposted by @nstoesser.bsky.social
Matthew J Shepherd @matthewjshepherd.bsky.social · 20/02/2026
🚨 New pre-print! 🚨 In the largest study of its kind to-date, we investigate the ecological and evolutionary mechanisms driving within-patient evolution of antimicrobial resistance (AMR). Read here: www.biorxiv.org/content/10.6... , and follow along with this thread, discussing our findings (1/21)
biorxiv.org
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nstoesser.bsky.social @nstoesser.bsky.social · 09/02/2026
If you're interested, click on www.ox.ac.uk/admissions/g... - Life and Medical Sciences, Clinical Medicine 04!
ox.ac.uk
UNIQplus projects | University of Oxford
Projects available for entry in 2026As part of your UNIQplus Research Internship, you will be working on a project under the supervision of academic staff from our community of world-leading
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nstoesser.bsky.social @nstoesser.bsky.social · 30/01/2026
By Shireen Kotay/Amy Mathers - Biofilm removal in hospital sink drains drives unintended surges in antibiotic resistance rdcu.be/e1uTu. Effects akin to gut microbiome dysbiosis/loss of colonisation resistance. To mitigate these reservoirs we need better evidence to understand what works best where.
rdcu.be
Biofilm removal in hospital sink drains drives unintended surges in antibiotic resistance
npj Antimicrobials and Resistance - Biofilm removal in hospital sink drains drives unintended surges in antibiotic resistance
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nstoesser.bsky.social @nstoesser.bsky.social · 30/01/2026
Our project "Sardinia’s Invisible Marine Microbiome" is one of six 2026 #PartArt4OW participatory art initiatives! Excited to do this with the brilliant @annadumitriu.bsky.social (image credit), Sardinian scientists, citizens of Alghero, and colleagues in @modmedmicro.bsky.social @bashthebug.net
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nstoesser.bsky.social @nstoesser.bsky.social · 26/01/2026
Delighted to be involved in the Gram-Negative Antibiotic Discovery Innovator (Gr-ADI) consortium novonordiskfonden.dk/en/news/new-... as part of a project led by Annette von Delft gcgh.grandchallenges.org/grant/discov... @modmedmicro.bsky.social @samlipworth.bsky.social @philipwfowler.bsky.social
gcgh.grandchallenges.org
Discovery of Novel Klebsiella Hits Through In-Depth Genomic Profiling, Fragment-Based Drug Design and Accumulation Assays
Annette von Delft and collaborators Nicole Stoesser, Lizbe Koekemoer, Ed Griffen, Paul Brennan, Frank von Delft, Phil Fowler, and Thomas Lanyon-Hoggat of the University of Oxford in the United Kingdom...
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nstoesser.bsky.social @nstoesser.bsky.social · 13/01/2026
Univ of Oxford UNIQ+ scheme applications open: 7-week research internship this Summer www.ox.ac.uk/admissions/g.... Lots of projects - one in our lab on microplastics & AMR & hospital environments at @modmedmicro.bsky.social led by Aram Swinkels www.ox.ac.uk/admissions/g... (Clin Med 04). Join us!
ox.ac.uk
What is UNIQplus? | University of Oxford
The UNIQplus programmeThe UNIQplus programme is aimed at supporting talented undergraduates from under-represented groups, who would find continuing into postgraduate study a challenge for reasons
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nstoesser.bsky.social @nstoesser.bsky.social · 06/01/2026
New out by @dotnagy.bsky.social & colleagues synthesising published epidemiological/microbiological/genomic data on 'big 5' CPE hospital outbreaks: www.medrxiv.org/content/10.6... Lots of them, but sampling and reporting heterogeneity makes it hard to nail risk factors for dissemination.
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Reposted by @nstoesser.bsky.social
Bash the bug @bashthebug.net · 20/11/2025
Our team wore blue for World Antimicrobial Awareness Week 2025💙 Research into how resistance emerges, spreads and can be prevented is vital. Our group works to understand these processes and develop better tools to detect, monitor and combat antimicrobial resistance. #WAAW @oxfordbrc.bsky.social
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Reposted by @nstoesser.bsky.social
Sam Lipworth @samlipworth.bsky.social · 08/10/2025
Pleased to see this out today in @lancetmicrobe.bsky.social www.sciencedirect.com/science/arti.... We estimate the independent effects of AMR genes on MIC at a drug-bug level and challenge the idea that resistance is a binary phenomenon.
sciencedirect.com
Estimating the association of antimicrobial resistance genes with minimum inhibitory concentration in Escherichia coli: an observational study
Surveillance and prediction of antibiotic resistance in Escherichia coli relies on curated databases of genes and mutations. We aimed to quantify the …
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Reposted by @nstoesser.bsky.social
Will Matlock @wtmatlock.bsky.social · 30/09/2025
Now published in @natcomms.nature.com 🎉 www.nature.com/articles/s41... With Gillian Rodger, @nstoesser.bsky.social, @samlipworth.bsky.social, @stat-sarah.bsky.social, and many others!
nature.com
Escherichia coli phylogeny drives co-amoxiclav resistance through variable expression of TEM-1 beta-lactamase - Nature Communications
This study found E. coli phylogenetic background shapes TEM-1 beta-lactamase expression and co-amoxiclav resistance. Phylogeny alone shifted isolates from susceptible to resistant, stressing a need for lineage-sensitive genotype-phenotype prediction.
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Reposted by @nstoesser.bsky.social
Dorottya Nagy @dotnagy.bsky.social · 25/09/2025
Pleased to see this pre-printed, highlighting the completeness/accuracy of @nanoporetech.com long-read genome assembly for clinical Enterobacterales: www.biorxiv.org/content/10.1... Thanks to colleagues @modmedmicro.bsky.social, @ukhsa.bsky.social, @genewiz.bsky.social and @oxfordbrc.bsky.social!
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nstoesser.bsky.social @nstoesser.bsky.social · 24/09/2025
Job opportunity for microbial genomicists interested in E. coli and Klebsiella infections and AMR 👀⬇️ - do get in touch if you might be interested! Closing date 7th Oct.
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nstoesser.bsky.social @nstoesser.bsky.social · 01/09/2025
Great new opportunity to work with #Liamshaw and @mutantbug.bsky.social as part of our HPRU collaboration (www.expmedndm.ox.ac.uk/research/hpr...) - sinks, phages, wastewater genomes, novel threat detection bit.ly/45Wcv6I - deadline 14th Sept 👀
bit.ly
Details | Working at Bristol | University of Bristol
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nstoesser.bsky.social @nstoesser.bsky.social · 26/07/2025
New analysis from Kevin Chau @modmedmicro.bsky.social for the SinkBug Consortium (a collaboration with teams across 29 UK hospitals, NITCAR, UKHSA): Pathogen and AMR gene burden in 287 hospital sink-trap metagenomes and factors associated with high burdens.
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