Noah Reid @noahreid.bsky.social · 30/09/2026This story presents a couple dealing with familial adenomatous polyposis as a compelling case for legalizing embryonic gene editing. I'm not an expert, but shouldn't mendelian diseases be more easily dealt with by preimplantation genetic testing? Isn't gene editing increased risk for no gain?npr.orgThis startup wants to prove gene-editing embryos is safe for making healthy babiesOrigin Genomics aims to prove that the potential benefits of its technology for editing disease-causing genes in human embryos outweigh the risks. 251
Reposted by Noah ReidCellular Tracking Technologies @celltracktech.bsky.social · 28/09/2026A Northern Waterthrush tagged in Cape May, NJ left after sunset on Sep 11. Two weeks later it was over Colombia! Jamaica -> Colombia included ~800 km of open Caribbean. 3,082 km so far! @birdscanada.bsky.social @originalstu.bsky.social #MotusWTS #BirdMigration #ornithology @nature.org 13919
Reposted by Noah ReidCarl Zimmer @carlzimmer.com · 27/09/2026Four days ago, a scientist was surprised by the news that Anthropic discovered new virus genes for making DNA. He says he’s been studying them for years—and feeding his data to Anthropic’s AI as part of his own research. Coincidence? Here’s my story. nyti.ms/3VSWaycnyti.msDid Anthropic’s A.I. Really Make a Scientific Discovery on Its Own? (Gift Article)An expert at the University of Copenhagen said his team had been sharing its research with the company’s A.I. model, Claude, and that its new finding matched their work. 892119874
Reposted by Noah ReidWei Shen 沈 伟 @shenwei356.bsky.social · 24/09/2026SeqKit is now faster and uses 40% less memory when reading large FASTA records, such as human genomes, though it still uses more RAM than tools written in C/C++/Rust. Worth upgrading! github.com/shenwei356/s...github.comGitHub - shenwei356/seqkit: A cross-platform and ultrafast toolkit for FASTA/Q file manipulationA cross-platform and ultrafast toolkit for FASTA/Q file manipulation - shenwei356/seqkit 0146
Noah Reid @noahreid.bsky.social · 21/09/2026If me and Rudy were astronauts and discovered some seemingly benign but actually hostile alien biosphere, Rudy would not be the loyal companion with a sixth sense for danger. He would be the first to get got. 110
Noah Reid @noahreid.bsky.social · 19/09/2026I like being a completely unsophisticated grillmaster. It means that sometimes food is mediocre, but it also leaves room for food to be surprisingly glorious. Like why is this red pepper so incredibly delicious? I don't know. It's a gift from heaven. 120
Noah Reid @noahreid.bsky.social · 19/09/2026This morning the first Tolland County sedge wren in over 30 years was found. Given how sneaky it was it makes you wonder how many have passed through unnoticed. 041
Noah Reid @noahreid.bsky.social · 17/09/2026What. The. Fuck.nytimes.comTrump Administration Moves to Gut a Core Endangered Species Protection (Gift Article)An internal memo reinterprets the law so that only the intentional killing of animals, not collateral harm, is illegal. 031
Noah Reid @noahreid.bsky.social · 14/09/2026A student who already has credentials needs to set up 2FA for our HPC. IT demands that I vouch for him. But they also need proof that I am who I say I am in the form of photographs of my university ID. This is all taking place over university e-mail.static.klipy.comTucker CarlsonALT: Tucker Carlson 130
Reposted by Noah ReidIan Sudbery @iansudbery.bsky.social · 12/09/2026Holy moly, @ensembl.org killed biomart! Hope many R scripts are there out there that depend on biomaRt? How many people have informatics practicals, or undergraduate project instructions that depend on a web interface for bulk selection of data? 53327
Reposted by Noah ReidWayne Maddison @waynemaddison.bsky.social · 09/09/2026The Tree of Life web project is back! A phylogenetic view of biodiversity way ahead of its time (ca. 1995!), conceived and led by David Maddison, collaborative & human-curated, widely used in teaching. Defunct technology had doomed it until Travis, Danny, and Andrew revived it. 🥳🎉 🧪 #evolbiol 010250
Reposted by Noah ReidJeffrey Ross-Ibarra @jrossibarra.bsky.social · 26/08/2026For folks interested I just posted my keynote on ARGs from #PEQG26 on youtube (with permission). Thanks again to @genetics-gsa.bsky.social and organizers for what was a wonderful conference (except for the 24hrs prior to my talk when I was too nervous to sleep or think straight) youtu.be/ntJOdZd0mwcyoutu.bePEQG Keynote 2026YouTube video by Jeffrey Ross-Ibarra 06224
Reposted by Noah ReidDan Garisto @dangaristo.bsky.social · 20/08/2026Scoop: For nearly a year, NSF has struggled to make new grants. Now we know that it will not catch up. In fact, NSF will award just 6,100 new grants—a 30% y/o/y decline, itself down from a previous avg. of 11,000+. In fact, the last time NSF awarded so few grants was in the early '80s.nature.comExclusive: NSF set to issue lowest number of new grants in four decadesThe US science-funding agency is withholding $1 billion of its budget so that the money can go to a special White House project. 14753471
Noah Reid @noahreid.bsky.social · 20/08/2026me, a big brain PhD with years of research experience and a number of highly cited publications teaching bioinformatics: 140
Reposted by Noah ReidColin Carlson @colincarlson.bsky.social · 10/08/2026I wrote about a reason not to use generative AI in your writing that I haven't seen anyone talking about. Once I realized this, banning GenAI in our lab's writing became a no-brainer. Feel free to share, I think this is probably useful especially for trainees: www.carlsonlab.bio/thoughts/the...carlsonlab.bioThe only reason you’ll ever need not to write with AI — The Carlson LabOver the last year, our lab has been developing a policy on AI use. To do this, we did three main things: We read a lot of academic publications and tech news. We set up an #ai channel on our la... 351562633
Noah Reid @noahreid.bsky.social · 07/08/2026This looks pretty cool! www.science.org/doi/10.1126/...science.orgAdaptation across an extreme elevational gradient in Andean leaf-eared mice, the world’s highest-dwelling mammalAndean leaf-eared mice (Phyllotis vaccarum) live at the highest elevations of any mammal, and they also have the broadest elevational range, from sea level to mountain summits of >6700 meters. Highlan... 093
Noah Reid @noahreid.bsky.social · 05/08/2026Is there an explainer out there about this? How can you "dismiss charges" against people who have already been convicted? Why is any judge bound to do it? What an insane travesty. www.nytimes.com/2026/08/04/u...nytimes.comJudge Pained as He Grants Dismissal of Jan. 6 Charges Against Oath KeepersThe judge, Amit P. Mehta, blasted the administration’s request for a dismissal in the case, saying it bestowed “unearned grace” on the Oath Keepers defendants “by wiping their records clean.” 210
Noah Reid @noahreid.bsky.social · 18/07/2026Cellar spiders prove the theory of spontaneous generation. 140
Noah Reid @noahreid.bsky.social · 17/07/2026Counterpoint: chatgpt is at least an average search engine. 120
Reposted by Noah Reidkeholsinger.bsky.social @keholsinger.bsky.social · 17/07/2026White House Faces Stiff Pushback on Subjecting Grants to Political Reviewnytimes.comWhite House Faces Stiff Pushback on Subjecting Grants to Political Review (Gift Article)Academics, city leaders and congressional lawmakers number among the thousands to urge the Trump administration to reconsider a plan to assert more control over grants. 032
Reposted by Noah ReidChris Steller @chrissteller.bsky.social · 16/07/2026Someone just sent me this photo from Chicago, unbelieveable 35183741145
Reposted by Noah ReidUConn Computational Biology Core @cbcuconn.bsky.social · 11/07/2026Join us July 28–30 for a Virtual ChIP-Seq / ATAC-Seq Workshop! 🧬 📅 10 AM – 2 PM EST 💻 Live on MS Teams + recordings 💰 $600 ($500 UConn affiliates) Register: bioinformatics.uconn.edu/cbc-workshops/ #ChIPSeq #ATACSeq #Bioinformatics #Workshop 021
Noah Reid @noahreid.bsky.social · 12/07/2026Casual soccer watcher... I have no idea why that just happened. Couldn't follow the announcers. Anyone want to help me out? 100
Reposted by Noah ReidDr. Arun Sethuraman @arunsethuraman.bsky.social · 11/07/2026Hey team - it’s looking very likely that I’ll be hiring not one but two four year postdocs! We’re a fun lab with tons of theoretical and applied pop gen projects - broadly in polyploid, conservation, and human evo. Competitive salary, sunny San Diego! Do share with your about to defend grads! 18078
Noah Reid @noahreid.bsky.social · 06/07/2026I submitted my comment about the OMB rule impacting federal funding today. 0207
Reposted by Noah ReidAndrew Carroll @acarroll.bsky.social · 01/07/2026How good is MiniBWA, the successor to BWA? To test it, I ran MiniBWA on sequencing from 76 different species, comparing mapping speed, rate and accuracy with BWA MEM. In short, it's really good. If you map short reads, it's well worth your time. andrewcarroll.github.io/2026/06/30/t...andrewcarroll.github.ioThe Best of Both Worlds - Assessing MiniBWARecently, Heng Li released MiniBWA (GitHub) alongside a paper by Heng Li and Nils Homer describing the method (paper). MiniBWA builds on the approaches in Minimap2 (also by Heng Li), but falls back on... 19862
Noah Reid @noahreid.bsky.social · 26/06/2026It is so weird that people like the term "upshot", as in "result of an event". It is so close to "upside", as in "the good part of the result of an event". To my ear you sound like a psychopath when you say "the upshot of this policy is that 25,000 people will die preventable deaths". 100
Reposted by Noah ReidRob Denton @rddenton.bsky.social · 21/06/2026Bummed to miss #Evol2026. For all those students looking for a position, we're recruiting MS students (polyploid genomics) and a PostDoc (conservation genomics) for next year. Shoot me an email! 01616
Reposted by Noah ReidJeremy Yoder says no war @jbyoder.org · 22/06/2026Sam Scheiner accepts his @sse-evolution.bsky.social Lifetime Achievement Award by pulling up a slide packed with names of colleagues from his 26 years at NSF, and reminding us to thank federal agency staff and scientists who are still working to support research while going "through hell" #Evol2026 06716
Reposted by Noah ReidPhil Ewels @ewels.bsky.social · 22/06/2026I'm very happy to say that we now have new tools for viewing @nextflow.io log files for both the #CLI and the #VSCode extension! Try it out with the latest Nextflow edge release (26.05.0-edge) after a run: $ nextflow logfile Or open any log file in VSCode with the Nextflow extension installed ✨🌈 032
Noah Reid @noahreid.bsky.social · 17/06/2026I installed the posit assistant in RStudio out of curiosity and in the last 20 minutes it has been just awful. I haven't tried to use it for anything substantive, but it's making all these code/text predictions that are not helpful AT ALL. 101
Noah Reid @noahreid.bsky.social · 15/06/2026Are you worried that the AI tutoring you is feeding you nonsense? Do you suspect its praise of your brilliant questions is... insincere? Allay your fears by learning how to analyze single-cell data from an actual human at our live-taught virtual workshop coming up next week! 000
Noah Reid @noahreid.bsky.social · 14/06/2026Kind of staggering to watch another major forest tree species get erased in Connecticut (ashes first and now beeches). 020
Noah Reid @noahreid.bsky.social · 13/06/2026🐪 Animal #1048 🐀 I figured it out in 4 guesses! 🟧🟩🟩🟩 🔥 1 | Avg. Guesses: 4 metazooa.com #metazooametazooa.comMetazooaBecome an evolutionary detective to find the Mystery Animal! 010
Reposted by Noah ReidMarkus Eichhorn @markuseichhorn.bsky.social · 11/06/2026Bob Ricklefs RIP. One of the giants of ecology. His textbooks were the gateway to the field for many students. His papers were invariably thoughtful, well-argued and provocative, even those I disagreed with. 🌏🧪🌐dynamicecology.wordpress.com 55026
Noah Reid @noahreid.bsky.social · 09/06/2026Which scientific field would be least comprehensible to a time-traveling scientist from, say, the 1950s? I feel like it's gotta be statistics. 511
Noah Reid @noahreid.bsky.social · 05/06/202640 minutes late with an ebird checklist. www.youtube.com/watch?v=jO2j...youtube.comWeekend Update: Jane Wickline on Being Chronically Late - SNLYouTube video by Saturday Night Live 000
Reposted by Noah ReidKaren R. Lips @karenrlips.bsky.social · 05/06/2026Unexpected expansion and regrowth in Earth’s mangrove forests over the past four decades www.science.org/doi/10.1126/...science.orgUnexpected expansion and regrowth in Earth’s mangrove forests over the past four decadesGlobal mangrove forests have disappeared rapidly because of deforestation but have also regrown through natural regeneration and restoration. Yet their long-term trends in extent and canopy cover rema... 078
Reposted by Noah Reidlifescitrainers.bsky.social @lifescitrainers.bsky.social · 04/06/2026Are you a life scientist? Do you deliver or enroll in short-course professional development. Join our community especially for tomorrow's community call (11AM U.S. Eastern/16:00 UTC) for a panel discussion exploring AI for professional learners: lifescitrainers.org/2026/05/25/a...lifescitrainers.orgAI and Short-Format Professional Development — What We Know and Don’t Know About Learners Outside the ClassroomThis community call will explore how artificial intelligence is reshaping short-format training and professional development in the life sciences. 022
Noah Reid @noahreid.bsky.social · 03/06/20261. Big data analysis. 2. Oops. Major sample mix up. 3. Figure out what happened. 4. Fix it. 5. Re-do big data analysis. 6. Somehow not fixed. 7. ☠️ 130
Reposted by Noah ReidCarl Zimmer @carlzimmer.com · 01/06/2026Trump administration shuts down deep-sea instruments that monitored climate change for a decade. “By dismantling such a system, we push the United States back yet again into a rear seat in global scientific leadership,” said a former official. Story by @eniiler.bsky.social Gift link: nyti.ms/4voqmxPnyti.ms 88139
Noah Reid @noahreid.bsky.social · 31/05/2026Boston Hollow is a very underrated CT hiking area. I just did 5 miles on the Nipmuck trail/Boston Hollow Rd through incredibly beautiful forest. It's packed with mountain laurel covered in flower buds (maybe a week or two from full bloom?) and heard/saw 14 warbler species. Only saw one other hiker. 230
Noah Reid @noahreid.bsky.social · 31/05/2026I love inaturalist because you can upload a picture of something like a fisher and within three minutes a user named FISHER_FANATIC will confirm the ID. 060
Reposted by Noah ReidJacquelyn Gill @jacquelyngill.bsky.social · 29/05/2026🧵 Public science in the US has taken some heavy hits over the last year, but the White House OMB is proposing a series of changes that will result in a TKO for science as we know it unless we fight back. Here's what's happening, and why it matters. 1/n 2719251090
Reposted by Noah ReidDan Garisto @dangaristo.bsky.social · 27/05/2026Scoop: NSF has been quietly blocking new funds and grants to four top universities: Duke, Harvard, Princeton, and Yale. Dozens of proposals from PIs at these universities—and their collaborators—have been stuck at the Office of Award Management awaiting finalization for months.nature.comExclusive: NSF puts new research grants to top universities on holdUS science funder once again restricts awards to Harvard University and other research institutions. 30893625
Reposted by Noah ReidNoam Ross @noamross.net · 27/05/2026The National Science Foundation is terminating and suspending grants again, and at Grant Witness we need you to help to track them! 🧪 We can only identify research being suppressed by under-the-radar suspensions directly from researchers. Please report! grant-witness.us/posts/2026-0... #NSFgrant-witness.usNew Grant Disruptions at NSF - We Need Your Help to Report! – Grant Witness 5460424