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Nadezhda Azbukina

@nazbukina.bsky.social
59 followers 104 following 17 posts

PhD student, @ETH_BSSE @TreutleinLab, FBB MSU Alumni

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Reposted by Nadezhda Azbukina
Stirling Churchman @stirlingchurchman.bsky.social · 28/07/2026
RNA-seq tells us how much RNA is present in the cell. But to understand gene regulation, we need to easily measure the synthesis and decay rates driving this abundance. We introduce AIR-seq: analog intrinsic recoding sequencing. (1/6) www.biorxiv.org/content/10.6...
biorxiv.org
Analog intrinsic recoding measures RNA dynamics without chemical conversion
Steady-state RNA abundance measurements mask the synthesis and decay rates that shape gene expression. Analog intrinsic recoding sequencing (AIR-seq) repurposes the base-pairing properties of N4-hydro...
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Nadezhda Azbukina @nazbukina.bsky.social · 06/06/2026
Excited to share that our paper is out in @natneuro.nature.com, presenting a multi-omic atlas and high-throughput morphogen screen of human organoids modeling the posterior brain! 🧠 nature.com/articles/s41... @zhisonghe.bsky.social @hsiuchuanlin.bsky.social @TreutleinLab @graycamplab.bsky.social
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Reposted by Nadezhda Azbukina
D-BSSE, ETH Zurich @handle.invalid · 05/02/2026
🧠 Scientists from the lab of #BarbaraTreutlein | @ethz.ch and colleagues from @unibas.ch and #UniversityCopenhagen created the most detailed picture yet of how early human #brain tissue responds to the chemical signals that guide brain development👇🏽 u.ethz.ch/5xOuT
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Reposted by Nadezhda Azbukina
Carlo Colantuoni @carlocolantuoni.bsky.social · 23/01/2026
NEXT TUE: DDD seminar, Jan. 27, 2025 @ 1PM Eastern US: Nadezhda Azbukina @nazbukina.bsky.social (from Dr. Barbara Treutlein's group) will speak on "A systematic study of morphogen patterning and its reproducibility in human neural organoids". carlocolantuoni.org/seminar
carlocolantuoni.org
SeminarPage | Carlo Colantuoni
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Nadezhda Azbukina @nazbukina.bsky.social · 20/12/2025
‪Happy to contribute to the Research Briefing featuring our latest study of human neural organoid patterning using morphogens. @fatimasnc.bsky.social TreutleinLab & @graycamplab.bsky.social @bsse.ethz.ch & IHB
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Nadezhda Azbukina @nazbukina.bsky.social · 19/12/2025
Check out our latest work on systematic morphogen patterning of neural organoids from Treutlein Lab and @graycamplab.bsky.social
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Reposted by Nadezhda Azbukina
Camp Lab @graycamplab.bsky.social · 25/10/2025
We are searching for computational PhDs and Postdocs to join our group in collaboration with Barbara Treutlein's Lab. We have exciting single-cell technology projects that incorporate bioengineering, computation, biology, translation. Send CV to deco_ihb@roche.com
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Reposted by Nadezhda Azbukina
Hsiu-Chuan Lin @hsiuchuanlin.bsky.social · 12/07/2025
My postdoc work at Treutlein lab and @graycamplab.bsky.social with @jasperjanssens.bsky.social is out in @science.org ! We screen for neuron subtypes using pro-neural TFs + morphogen combinations + scRNA-seq and profiled over 700,000 cells in 480 conditions. www.science.org/doi/10.1126/...
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Reposted by Nadezhda Azbukina
jonas @josch1.bsky.social · 18/04/2025
Yay, we built a thing! With @dominik1klein.bsky.social Daniil, Aviv Regev, Barbara Treutlein @graycamplab.bsky.social @fabiantheis.bsky.social we use flow matching to enable generalised sc phenotype modeling. From cytokine screens to fate programming and organoid engineering tinyurl.com/3xhju7db
biorxiv.org
CellFlow enables generative single-cell phenotype modeling with flow matching
High-content phenotypic screens provide a powerful strategy for studying biological systems, but the scale of possible perturbations and cell states makes exhaustive experiments unfeasible. Computatio...
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Reposted by Nadezhda Azbukina
marinanikolova.bsky.social @marinanikolova.bsky.social · 21/04/2025
Happy to share our resource for blood vessel organoids! @zhisonghe.bsky.social, Makiko Seimiya, Gustav Jonsson, Wuji Cao, Ryo Okuda, Reiner Wimmer, Ryoko Okamoto Barbara Treutlein, @graycamplab.bsky.social, @penningerlab.bsky.social
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Nadezhda Azbukina @nazbukina.bsky.social · 24/03/2025
Excited to share our latest preprint, presenting a multi-omic human neural organoid cell atlas of the posterior brain! 🧠🔬 doi.org/10.1101/2025... Great work with @hsiuchuanlin.bsky.social @zhisonghe.bsky.social @graycamplab.bsky.social and Barbara Treutlein!
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