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Marco Capodiferro

@marcocapo.bsky.social
330 followers 246 following 17 posts

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Reposted by Marco Capodiferro
Linda Ongaro @lindaongaro.bsky.social · 04/09/2026
Congrats @marcocapo.bsky.social! 🍾
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Kevin Daly @gingerhowley.bsky.social · 07/09/2026
I'm hiring a postdoc as part of my ERC project - the deadline is tomorrow noon GMT, apologies for the little notice If you have interest but can't make the deadline, please DM/email me immediately and i can try extend the deadline a few days
universityvacancies.com
University & College Vacancies
Connecting talent with opportunity in higher education
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Marco Capodiferro @marcocapo.bsky.social · 04/09/2026
Our paper on archaic introgression in imputed ancient genomes is out. Imputation performs better in archaic regions, making Neanderthal and Denisovan segments detectable in low-coverage data. Thousands of archived genomes become usable. doi.org/10.1038/s414...
doi.org
Archaic ancestry inference in imputed ancient human genomes - Nature Communications
Genotype imputation enables accurate detection of Neanderthal and Denisovan ancestry in low-coverage ancient genomes and allows the identification of introgressed haplotypes as well as candidate genes...
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Kevin Daly @gingerhowley.bsky.social · 02/09/2026
Our paper on ancient sheeppox virus genomes, including many found from parchment samples, is now published af Science Advances. Congrats to all our co-authors and particularly first author Louis. #aDNA share.google/JqVOTB2lvxcO...
share.google
Three thousand five hundred years of sheeppox virus evolution inferred from archaeological and codicological genomes
Sheeppox virus (SPPV) is a major livestock pathogen causing economic hardship through reduced production and death of vulnerable sheep, with written descriptions of sheeppox-like disease recorded sinc...
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Hannah Moots @mootspoints.bsky.social · 01/08/2026
New study on mammoths from Upper Paleolithic Kraków Spadzista, Langmannersdorf & Dolní Věstonice compared w/ non-anthropogenic contexts to learn about people who relied on them 🧬 Great coverage (in Polish!) www.national-geographic.pl/historia/kra... Article: www.sciencedirect.com/science/arti...
national-geographic.pl
Zaskakujące wyniki DNA. Nasi przodkowie wybierali samice mamutów
Jak polowali ludzie w epoce lodowcowej? Najnowsze badania genetyczne setek mamutów przynoszą zaskakującą odpowiedź. W miejscach obozowisk ludzkich przeważają szczątki samic. Ważną rolę w tych wnioskac...
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Fernando Villanea @fervillanea.bsky.social · 30/06/2026
@david-peede.bsky.social talking about the relation between coalescent times and site patters under an introgressed genetic tree to introduce a new statistic D*. D* is an ILS agnostic test of introgression that performs best under unknown demography.
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Society for Molecular Biology and Evolution @official-smbe.bsky.social · 02/07/2026
Save the date for the 2027 SMBE Conference in Québec City! The LOC of #SMBE2027 would like to welcome you to Québec City for the 2027 Conference of the Society for Molecular Biology and Evolution,from June 20-24, 2027, and hosted by Université Laval at the Québec Convention Centre. #society
Save the Date
SMBE2027
Québec City, Canada
June 20-24, 2027
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ICP2026 Stockholm @palaeogenomics.bsky.social · 27/06/2026
♥️ THANK YOU ♥️ We are overwhelmed by the positive comments and are incredibly happy that everyone enjoyed their time in Stockholm! #ICP2026 was only possible with the hard work of the organizing committee and a marvellous team of ECR volunteers 🟠 at @cpgsthlm.bsky.social
Organizing committee and volunteer team for #ICP2026
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Marco Capodiferro @marcocapo.bsky.social · 26/06/2026
We're still absorbing tons of inspiring notes from #ICP2026, and already planning the next one. #ICP2028 is coming to Dublin 🍀 and we can't wait to welcome the ancient DNA 🧬 community in Ireland. We'll do our best to build on the outstanding work of the Stockholm committee. More info coming soon!
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ICP2026 Stockholm @palaeogenomics.bsky.social · 26/06/2026
#ICP2026 Stockholm is over, but ICP will return... in 2028! #ICP2028 will be hosted by Trinity College Dublin 🎉☘️🇮🇪
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Kevin Daly @gingerhowley.bsky.social · 26/06/2026
Dublin crew at #ICP2026
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Marco Capodiferro @marcocapo.bsky.social · 26/06/2026
🧬 @lindaongaro.bsky.social from #huentasanchezlab, presenting at #ICP2026 her pipeline to detect IBD in ancient humans 🦴
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Kevin Daly @gingerhowley.bsky.social · 25/06/2026
Day 3 of #ICP2026 with these lovely people.
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ICP2026 Stockholm @palaeogenomics.bsky.social · 23/06/2026
Full house for the first plenary talk of #ICP2026 by Ian Barnes "From a simple beginning to endless forms" aka "Why are we here?"
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Kevin Daly @gingerhowley.bsky.social · 24/06/2026
Reposting in case any #ICP2026 attendee would like to chat!
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Matthew Collins @matthewcollins.bsky.social · 23/06/2026
@sadbhcarrick.bsky.social presenting on human #anceintDNA extracted from #Medieval #manuscripts @ bsky.app/profile/pala... The more that we explore the #biocodicology of parchment, the more we learn!
A wide, high-angle shot of a speaker presenting at a large auditorium stage during the Palaeogenomics 2026 conference. A large projector screen displays an introductory slide about medieval manuscripts, while an audience sits in tiered, curved seating in the foreground.
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Marco Capodiferro @marcocapo.bsky.social · 24/06/2026
🧬 Martina Gulì presenting at #ICP2026 preliminary results from her work on archaic introgression in pre-contact ancient Americans 🌎
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Matthew Collins @matthewcollins.bsky.social · 24/06/2026
@louis-lhote.bsky.social talks about a high-resolution analysis of the evolution of the sheepox virus from a surprising source... #Medieval #Parchment @palaeogenomics.bsky.social. www.biorxiv.org/content/10.6...
Speaker presenting on sheep pox virus evolution, standing and speaking in a modern auditorium
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Society for Molecular Biology and Evolution @official-smbe.bsky.social · 16/06/2026
Talks by: @amanda-meuser.bsky.social Yizhen Wang Mikel Lana Alberro Steven Reilly Alberto Carmagnini @annaewhite.bsky.social @flarisi.bsky.social @kittybmurphy.bsky.social @marcocapo.bsky.social Charlotte Antoine-Derouet Diyar Hamidi Oğuzhan Parasayan Michael Mitschke
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Fernando Villanea @fervillanea.bsky.social · 09/02/2026
We're excited to be recruiting an NSF funded postdoc to work in the Villanea lab at CU Boulder. We're specifically interested in candidates who want to work at the intersection of population genetics, ancient DNA, and computer modeling. Please RT jobs.colorado.edu/jobs/JobDeta...
jobs.colorado.edu
PostDoctoral Associate
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Kevin Daly @gingerhowley.bsky.social · 26/11/2025
Despite my insomnia, I'm very happy to share our preprint: a multi-disciplinary assessment of a sheep mass mortality event from ~18th century France. We report the first ancient sheeppox virus (think smallpox) and the Taenia hydatigena (nasty roundworm) genomes. #aDNA
biorxiv.org
Evidence of sheeppox in 17th-19th century France: a multi-disciplinary investigation of a sheep mass mortality assemblage
Epizootic outbreaks posed major threats to food security, economic stability, and animal welfare in past communities. While these events and their impacts are well documented in historical records, ve...
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Paleogenomics - María Ávila Arcos @paleogenomics.bsky.social · 03/12/2025
Lovely is the right adjective. Writing this was so enjoyable in the company of @acstone.bsky.social @blevinske.bsky.social and Verena Schuenemann. Hope you enjoy.
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Carina Schlebusch @cschlebu.bsky.social · 03/12/2025
Our new ancient DNA paper has just been published! We present 28 new genomes from southern Africa - several of them high-coverage whole genomes. Exciting to be moving towards population-level representation of ancient southern African genetic diversity! www.nature.com/articles/s41...
nature.com
Homo sapiens-specific evolution unveiled by ancient southern African genomes - Nature
The genomes of 28 ancient southern African individuals dated to between 10,200 and 150 years before present offer insights into the evolution of Homo sapiens.
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Marco Capodiferro @marcocapo.bsky.social · 03/12/2025
So happy to see this out! Amazing science and amazing people behind it. Well done!!!
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Benjamin Peter @benmpeter.bsky.social · 20/10/2025
If you need more exciting news about Denisovans, check out our paper on Denisovan ancestry in modern humans through time, out today in Current Biology: www.cell.com/current-biol...! #Denisovan #ancientDNA
cell.com
An early East Asian lineage with unexpectedly low Denisovan ancestry
Yang et al. study Denisovan ancestry in ancient and present-day humans. In contrast to other East Asians, genomic comparisons suggest that the Jomon derived most of their ancestry from a deep lineage…
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Janet Kelso @janetk.bsky.social · 20/10/2025
In a new paper led by Jiaqi Yang we trace the distribution of Denisovan introgressed DNA in ancient modern human genomes over time. www.cell.com/current-biol...
cell.com
An early East Asian lineage with unexpectedly low Denisovan ancestry
Yang et al. study Denisovan ancestry in ancient and present-day humans. In contrast to other East Asians, genomic comparisons suggest that the Jomon derived most of their ancestry from a deep lineage ...
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Out Of Context Football @nocontextfooty.bsky.social · 03/10/2025
Retweet this picture so many times that when someone googles FIFA, this picture shows up.
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Ireland-Palestine Solidarity Campaign @ipsc.bsky.social · 03/10/2025
🇵🇸 Amazing! 180 civil society organisations have endorsed our National March for Palestine. Join us, 12.30pm. We march for sanctions on apartheid Israel and to show our unbreakable solidarity with our Palestinian sisters and brothers. All out! #FreePalestine #SanctionsNow 🇵🇸
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Kevin Daly @gingerhowley.bsky.social · 30/09/2025
Join us on 31st October to celebrate Día de los Muertos with some #ancientDNA from Mexico! Two very exciting talks on 🦣 and 🪴, by Federico Sánchez-Quinto and Marcela Sandoval-Velasco of LIIGH UNAM. Note the later 3pm London time! #aDNA @aarc-community.bsky.social
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Kevin Daly @gingerhowley.bsky.social · 28/09/2025
Very happy to see our pre-print on ancient Irish goat genetics on bioRxiv #aDNA #spiergorm I want to acknowledge this was only possible through the work of the late Dr. Judith Findlater, along with Prof. Eileen Murphy at @qubelfastofficial.bsky.social.
biorxiv.org
Old Goats: 3,000 years of genetic connectivity of the domestic goat in Ireland
The domestic goat likely first arrived to the island of Ireland as part of the introduction of agriculture approximately 5,900 years ago, and remains a part of the island's biocultural heritage. Howev...
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Iseult @iseultjackson.bsky.social · 22/09/2025
🦠💀🦠 Happy to share our (with @gunnar-u-neumann.bsky.social) new preprint on ancient Salmonella enterica genomes! We analysed 53 new genomes along with published ancient and modern datasets to learn about lineage replacements and host adaptation in prehistory: www.biorxiv.org/content/10.1...
biorxiv.org
Evolutionary history and recurrent host adaptation in ancient Salmonella enterica
Salmonella enterica subsp. enterica is an extremely diverse bacterial pathogen causing frequent infections and foodborne disease among human populations. More than 1500 different bacterial strains (se...
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Xavier Roca-Rada, PhD @xavierrocarada.bsky.social · 03/09/2025
🇵🇹Our paper on Portugal's genetic history is now published in Genome Biology. We present Portugal’s largest ancient genome collection, with deeper analyses than our pre-print, revealing migrations, admixture & continuity shorturl.at/TcErC @acadresearch.bsky.social @dnatimetravel.bsky.social
shorturl.at
The genetic history of Portugal over the past 5,000 years - Genome Biology
Background Recent ancient DNA studies uncovering large-scale demographic events in Iberia have presented very limited data for Portugal, a country located at the westernmost edge of continental Eurasi...
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Eugenia D'Atanasio @eugeniadat.bsky.social · 09/09/2025
Congrats to @fravasini.bsky.social, @beniamino77.bsky.social and all the coauthors! 🎉
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Kevin Daly @gingerhowley.bsky.social · 04/09/2025
Second craziest thing you'll read today: from 2026 I will be leading an @erc.europa.eu Starter Grant project. HERDPATH will explore how livestock and their pathogens co-evolved during the last 10,000 years. PhD advertisements to come! Press release below with one of the few good photos of me.
ucd.ie
| UCD Research
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Anahit Hovhannisyan @anahit19.bsky.social · 03/09/2025
Our new paper shows how a multidisciplinary approach (ancient proteins + DNA) reveals the long history of dairy in Armenia! 🥛🐄 www.biorxiv.org/content/10.1...
biorxiv.org
Palaeoproteomic and genetic insights into millennial-scale dairy consumption in Armenia
Dairy products are a key component of the diet in Armenia today, yet the origins of milk consumption, its historical development, and genetic adaptations related to milk digestion in the region remain...
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Marco Capodiferro @marcocapo.bsky.social · 01/09/2025
An extraordinary story of archaic introgression🧬: a Denisovan haplotype, introgressed through Neanderthals, selected in the Americas, and linked to an expanded copy number of a tandem repeat. Congrats to @david-peede.bsky.social, Emilia, and the whole team! 👉 Enjoy the read: doi.org/10.1126/scie...
science.org
The MUC19 gene: An evolutionary history of recurrent introgression and natural selection
We study the gene MUC19, for which some modern humans carry a Denisovan-like haplotype. MUC19 is a mucin, a glycoprotein that forms gels with various biological functions. We find diagnostic variants ...
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Laurits Skov @lauritsskov.bsky.social · 28/08/2025
Are you interested in doing a PhD in Copenhagen? Interested in studying Neanderthals and Denisovans which live on in our genomes? Than you are more than welcome to apply to join my group starting Jan 2026 :) candidate.hr-manager.net/ApplicationI... Please reach out if you have any questions!
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Federico Sánchez Quinto @fsanchezquinto.bsky.social · 29/08/2025
Thrilled to share our study sequencing genetic data from tropical mammoths 🏝️🦣. First DNA recovered from Columbian mammoths southern than USA shorturl.at/xjIvy. Thanks to all collaborators, you were key to this success! See below a fantastic note covering the paper by the great @rpocisv.bsky.social 👇
shorturl.at
Columbian mammoth mitogenomes from Mexico uncover the species’ complex evolutionary history
Paleogenomic studies suggest that Mammuthus columbi derives from an ancient hybridization between Mammuthus primigenius and Mammuthus trogontherii. While its habitat spanned from North to Central Amer...
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Chiara Barbieri @chiarabarbieri.bsky.social · 30/08/2025
A very special paper where we did something NEW! 🔥combining a large genetic dataset 🧬, a large linguistic dataset 💬, and Bayesian multilevel logistic regressions 📈, counting the effects of areal contact (geographic constrains) 🌎. Genetic admixture explains higher levels of linguistic exchanges...
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Fernando Villanea @fervillanea.bsky.social · 21/08/2025
Our paper on the evolution of MUC19 in humans, Neanderthals, and Denisovans is finally out today in Science! This has been a six-year effort by 13 authors to weave together 3 separate but related evolutionary stories around this one gene (more on thread 🧵). www.science.org/doi/10.1126/...
science.org
The MUC19 gene: An evolutionary history of recurrent introgression and natural selection
We study the gene MUC19, for which some modern humans carry a Denisovan-like haplotype. MUC19 is a mucin, a glycoprotein that forms gels with various biological functions. We find diagnostic variants ...
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Eugenia D'Atanasio @eugeniadat.bsky.social · 26/07/2025
🚨 New paper out in Genome Biology and Evolution! We present new ancient DNA evidence from Central Italy suggesting that Eastern Mediterranean genetic influence predates the Roman Empire. @beniamino77.bsky.social @fravasini.bsky.social 🧵👇 🔗 doi.org/10.1093/gbe/... 1/
doi.org
A new perspective on the arrival of the Eastern Mediterranean genetic influx in Central Italy before the onset of the Roman Empire
Abstract. Italian genetic history was profoundly shaped by the Romans. While the Iron Age Central Italian gene pool was comparable to that of other coeval
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Anders Bergström @anders-bergstrom.bsky.social · 15/07/2025
Don't miss the AaRC pre-ISBA event on the 26th of August - anyone interested in ancient DNA in animals is welcome to come along. And if you didn't get a talk at ISBA itself, submit an abstract here!
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David Peede @david-peede.bsky.social · 24/07/2025
It’s UNREAL 🤯 what imputation can reveal about archaic Introgression across space 🌎 and time ⏳, and I'm personally STOKED 🤩 to see what the imputation era of archaic introgression will uncover 👀
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Cedric Boeckx @cedricboeckx.bsky.social · 24/07/2025
Interesting new approach developed by @marcocapo.bsky.social and Emilia Huerta-Sanchez to gain new insight into introgression events: Archaic ancestry inference in imputed ancient human genomes 🧪🧬 www.biorxiv.org/content/10.1...
biorxiv.org
Archaic ancestry inference in imputed ancient human genomes
When modern humans expanded from Africa into Eurasia, they interbred with archaic hominins such as Neanderthals and Denisovans. This groundbreaking discovery, made in part possible through the genomic...
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Marco Capodiferro @marcocapo.bsky.social · 24/07/2025
Turns out imputation of introgressed archaic regions in aDNA works really well — sometimes even better than for the rest of the genome. More on this (and other cool results) in our new preprint 👇 #aDNA #ArchaicIntrogression #imputation doi.org/10.1101/2025...
doi.org
Archaic ancestry inference in imputed ancient human genomes
When modern humans expanded from Africa into Eurasia, they interbred with archaic hominins such as Neanderthals and Denisovans. This groundbreaking discovery, made in part possible through the genomic...
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Xavier Roca-Rada, PhD @xavierrocarada.bsky.social · 08/07/2025
🚨 New paper! 🧬 We explore ancestry shifts, kinship ties & Mediterranean links at Mas d’en Boixos (Catalonia), from the Neolithic to the Iron Age. 👨🏻‍🔬A long journey since my master’s! Huge thanks to Cristina, Assumpció & @dnatimetravel.bsky.social! @acadresearch.bsky.social shorturl.at/B8TlB
shorturl.at
Genetic transitions in the Neolithic and Bronze Age at Mas d’en Boixos (Catalonia, Spain)
Human genetics; Biological sciences; Paleobiology
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Leo Speidel @leospeidel.bsky.social · 25/06/2025
Postdoc position in my group in Tokyo! Please get in touch if you are interested. And happy to discuss projects - these would range from developing new methods to analysis of new genomes that we are now sequencing in the lab. Job Ad: www.riken.jp/en/careers/r... Lab page: speidellab.github.io
riken.jp
Seeking a few Postdoctoral Researchers at Mathematical Genomics RIKEN ECL Research Unit (25-695)
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HAAM-community @haam-community.bsky.social · 27/06/2025
We’re excited to share more about the 1st Annual HAAM Meeting — a hybrid pre-ISBA event! 📅 Aug 26 | 🏛️ Turin & 💻 online 🧬 HAAM updates 💼 Career panel w/ Lehti Saag, Monica Kelly, Éadaoin Harney & Zuzana Hofmanová ⚡ Flash talks — submit your abstract by July 11 (extended deadline‼️) 👉 shorturl.at/8LZsr
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Kevin Daly @gingerhowley.bsky.social · 02/07/2025
Are you attending ISBA & working on ancient animal DNA? On Tuesday 26th ~2-4pm we will Board the AaRC with an in-person event! Join us for seminars, a round table event, and of course networking! If you'd like to attend and/or present, sign up below @isba11.bsky.social @aarc-community.bsky.social
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ISBA11 Turin @isba11.bsky.social · 01/07/2025
Get excited for ISBA11! The conference program is now online! www.isba11.com/programme #ISBA11 #biomoleculararchaeology #Archaeology #Archaeology #archaeologist @isbarchaeology.bsky.social @archaeobiomics.bsky.social
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