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Houlston Lab, ICR

@houlstonlab-icr.bsky.social
116 followers 117 following 36 posts

We are the Cancer Genomics group at The Institute of Cancer Research (@icrlondon.bsky.social )working to understand the genetic basis of cancer. GWAS, TWAS, pheWAS, MR, WGS, Hi-C, genetic epidemiology, functional annotation houlston.group

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Reposted by Houlston Lab, ICR
Paul Pharoah @paulpharoah.bsky.social · 08/10/2026
A succinct piece about the flurry of activities that continue to promote MCEDs despite the negative Grail-Galleri trial. "This environment doesn’t lend itself to unbiased decision making." (i.e. panels of experts with serious financial conflicts of interest). www.bmj.com/content/395/...
bmj.com
Galleri: Trial results show why the NHS must not follow the US FDA in approving the multicancer test
After failing to meet the primary endpoint and controversy around lobbying and competing interests, the NHS must take its next steps cautiously, writes Margaret McCartney On 22 September, the New En...
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Reposted by Houlston Lab, ICR
bioRxiv Genomics @biorxiv-genomic.bsky.social · 09/06/2026
Enhancer-gene regulatory interactions in colorectal cancer revealed through genome-wide CRISPRi perturbations www.biorxiv.org/content/10.64898/20…
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Houlston Lab, ICR @houlstonlab-icr.bsky.social · 02/06/2026
Important paper informing the debate about screening prostate cancer
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Reposted by Houlston Lab, ICR
Konrad @konradjk.bsky.social · 13/05/2026
🧬 New preprint! We present an All by All analysis in All of Us: common and rare variant association testing across 392,030 whole genomes and 3,602 phenotypes. 1.337 trillion tests, ~50k significant signals, all publicly browseable. www.medrxiv.org/content/10.6...
medrxiv.org
Systematic common and rare variant association testing in 392,030 whole genomes in All of Us
Large-scale genome-wide association studies (GWAS) and rare variant association studies (RVAS) from population biobanks provide valuable resources for gene discovery in complex human traits. We presen...
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Houlston Lab, ICR @houlstonlab-icr.bsky.social · 10/03/2026
We hosted ~50 Year 12 students at our Chelsea labs yesterday for a look into cancer research! 🔬 We shared progress on our game we’re developing that explores life and work in the lab! It’s all part of our mission to help students see a future for themselves in the lab #PublicEngagement #STEM
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Reposted by Houlston Lab, ICR
Nature @nature.com · 26/02/2026
Nature research paper: Functional dissection of complex trait variants at single-nucleotide resolution go.nature.com/4cfeE2b
go.nature.com
Functional dissection of complex trait variants at single-nucleotide resolution - Nature
Massively parallel reporter assays across five cell types identify thousands of causal, noncoding regulatory variants among 220,000 loci, revealing diverse regulatory mechanisms shaping complex traits and disease.
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Reposted by Houlston Lab, ICR
The Institute of Cancer Research @icr.ac.uk · 23/02/2026
NEWS 🚨 The latest NHS trial update on the GRAIL multi‑cancer blood test shows it missed its primary goal.
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Houlston Lab, ICR @houlstonlab-icr.bsky.social · 20/02/2026
Our paper on mutational signatures was published earlier this week in @natgenet.nature.com We investigated mutations from #WGS in over 10k patients with 16 different cancers, from the @genomicsengland.bsky.social 100k Genomes Project www.nature.com/articles/s41... #cancer #genomics #signatures
nature.com
Comprehensive repertoire of the chromosomal alteration and mutational signatures across 16 cancer types - Nature Genetics
This study analyses whole-genome sequencing data of cancer samples from 10,983 patients and explores relationships among mutational signatures, various biomarkers and clinical outcomes.
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Houlston Lab, ICR @houlstonlab-icr.bsky.social · 29/01/2026
Attended some interesting and insightful talks on the first day of the #festivalofgenomics. Feeling inspired and ready to do it again tomorrow! #FoG2026 @fogenomics.bsky.social
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Houlston Lab, ICR @houlstonlab-icr.bsky.social · 19/01/2026
A appraisal of PRS informed prostate cancer screening by @amitsud.bsky.social, showing that the PRS approach resulted in more biopsies, fewer detections of clinically significant cancers, and increased overdiagnosis of low-grade tumours www.sciencedirect.com/science/arti...
sciencedirect.com
Comparison of Results from the BARCODE1 Study and Contemporary Prostate Cancer Screening Trials
Polygenic risk scores (PRSs) have generated considerable interest as a means of personalizing prostate cancer (PC) screening by stratifying individual…
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Houlston Lab, ICR @houlstonlab-icr.bsky.social · 12/01/2026
Applications for the 2026 Summer Student Scholarship Scheme are now open! This is for undergraduates going into their final year, to work with us at the ICR over the summer. Please share with anyone who may be interested www.icr.ac.uk/study-and-ca...
icr.ac.uk
Undergraduate Summer Scholarship Scheme - The Institute of Cancer Research, London
Our paid undergraduate summer scholarships offer undergraduate students a chance to gain hands-on cancer research experience.
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Houlston Lab, ICR @houlstonlab-icr.bsky.social · 05/01/2026
Happy New Year! ICYMI have a look at our mince pie taste test from last year. Looking forward to the exciting research to come (and more taste tests!)
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Houlston Lab, ICR @houlstonlab-icr.bsky.social · 23/12/2025
We are pleased to announce the results of the annual Houlston Lab mince pie taste test! This year, we restricted to the standard supermarket mince pies! #christmas #mincepie #tastetest
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Houlston Lab, ICR @houlstonlab-icr.bsky.social · 16/12/2025
We are pleased to present our manuscript on the annotation of clear cell Renal Cell Carcinoma #GWAS risk loci, recently published in @commsbio.nature.com www.nature.com/articles/s42... #ccRCC #cancer #genetics #genomics #KidneyCancer
nature.com
Deciphering genetic susceptibility to clear cell renal cell carcinoma - Communications Biology
Integration of genome-wide association data with epigenomic and chromatin interaction data identifies target genes mediating clear cell renal cell carcinoma risk, implicating disrupted hypoxia signall...
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Reposted by Houlston Lab, ICR
James Bonfield @jbonfield.bsky.social · 15/09/2025
Heads up: ignore samtools dot org, similarly minimap2 dot com and likely others. It's owned by a known phishing site and while the binaries they offer look valid currently (but note they may be serving us different binaries to others), that could change. Ie: it's not us (Samtools team)! Be warned
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Reposted by Houlston Lab, ICR
UK Biobank @ukbiobank.ac.uk · 06/08/2025
✅ Published in @natureportfolio.nature.com today, the paper describing the initial whole-genome sequencing analysis of 500,000 UK Biobank participants. Read here: www.nature.com/articles/s41...
nature.com
Whole-genome sequencing of 490,640 UK Biobank participants - Nature
A study reports whole-genome sequences for 490,640 participants from the UK Biobank and combines these data with phenotypic data to provide new insights into the relationship between human variation a...
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Houlston Lab, ICR @houlstonlab-icr.bsky.social · 30/06/2025
An incredibly valuable tool that we use all the time! Thank you to everyone at @ucscgenomics.bsky.social that maintains it for us!
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Reposted by Houlston Lab, ICR
Žiga Avsec @avsecz.bsky.social · 25/06/2025
Excited to launch our AlphaGenome API goo.gle/3ZPUeFX along with the preprint goo.gle/45AkUyc describing and evaluating our latest DNA sequence model powering the API. Looking forward to seeing how scientists use it! @googledeepmind
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Reposted by Houlston Lab, ICR
Axel Visel @axelvisel.bsky.social · 18/06/2025
Textbooks: “Enhancers are just a bunch of TFBSs” But how do they REALLY work? New paper with many contributors here @berkeleylab.lbl.gov, @anshulkundaje.bsky.social, @anusri.bsky.social A 🧵 (1/n) Free access link: rdcu.be/erD22
A meme-style comic panel with three parts. Left: A stylized enhancer with a mutation, surrounded by colored blocks representing functional motifs, a neural network diagram, chromatin accessibility signal traces, and a sequence motif. Two cartoon mouse embryos below show different LacZ reporter activity patterns. Top right: A hand hovers anxiously between two red buttons labeled “Experiments” and “AI,” with the caption “HOW DO ENHANCERS REALLY WORK?” Bottom right: A sweating superhero wipes his forehead, looking stressed about the difficult choice.
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Houlston Lab, ICR @houlstonlab-icr.bsky.social · 17/04/2025
It's not all work and no play in the Houlston Lab. We had our annual #Easter taste test! Returning to hot cross buns this year. We went a bit maverick and allowed some more ... unconventional varieties! #hotcrossbuns #tastetests 📸: @jessicamayh.bsky.social
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Houlston Lab, ICR @houlstonlab-icr.bsky.social · 16/04/2025
We are excited to announce our latest publication in #BloodCancerJournal of our Two-Sample MR analysis to investigate causal relationships between 446 immune cell traits and 6 B-cell malignancies 📄 www.nature.com/articles/s41... #cancer #genetics #Bcell #bloodcancer #drugdiscovery #MR
nature.com
Mendelian randomization of immune cell phenotypes to discover potential drug targets for B-cell malignancy - Blood Cancer Journal
Blood Cancer Journal - Mendelian randomization of immune cell phenotypes to discover potential drug targets for B-cell malignancy
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Reposted by Houlston Lab, ICR
UK Biobank @ukbiobank.ac.uk · 15/04/2025
In response to a recent Guardian article about why approved researchers in China can access our data, we have provided some additional information for our participants, including how we follow Government guidance on who can use UK Biobank. Please read here: ow.ly/yWsi50VAIIH
ow.ly
A message to our participants: why researchers in China can access our data
You may have questions about an article in The Guardian discussing why researchers in China are able to access UK Biobank. Read some additional information.
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Reposted by Houlston Lab, ICR
The Institute of Cancer Research @icr.ac.uk · 08/03/2025
Today is #InternationalWomensDay 👏 We are incredibly proud to celebrate the women of the ICR who are dedicated, driven, and determined to make a difference. You inspire us every day 👩‍🔬👩‍💻👩‍💼 #IWD2025 #AccelerateAction
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Houlston Lab, ICR @houlstonlab-icr.bsky.social · 30/01/2025
The team is at the #FestivalOfGenomics! If you see us, come say hi! #FOG25 #genomics
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