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Sebastian Höhna

@hoehna.bsky.social
522 followers 187 following 9 posts

Computational Biologist at LMU München. RevBayes, phylogenetics, Bayes & Macroevolution. Former Miller fellow (UC Berkeley), Emmy Noether group leader & ERC StG

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Reposted by Sebastian Höhna
Priscilla Lau @prilau.bsky.social · 30/07/2026
Our paper (also, my first first-author paper) is now available in MEE early view! In this study, we introduced a state-dependent Ornstein-Uhlenbeck model we implemented in RevBayes to test adaptive hypotheses in macroevolution. (1/3) besjournals.onlinelibrary.wiley.com/doi/10.1111/...
besjournals.onlinelibrary.wiley.com
An efficient Bayesian phylogenetic approach for joint inference of continuous and discrete trait evolution under a state‐dependent Ornstein–Uhlenbeck model
Macroevolutionary adaptation of a continuous trait to different discrete states across species can be modelled using a phylogenetic state-dependent Ornstein–Uhlenbeck (OU) process. Existing infere...
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Alessio Capobianco @acapomorphic.bsky.social · 13/05/2026
My new paper with @gdarlim.bsky.social and @hoehna.bsky.social is now out in Proceedings B! We set out to compare two different approaches to time-calibrate a molecular phylogeny: traditional node calibrations, and unresolved FBD... @royalsocietypublishing.org doi.org/10.1098/rspb...
doi.org
How to date a molecular phylogeny: comparison of effective priors between node calibration and fossilized birth–death
Abstract. Time-calibrating a phylogenetic tree is a fundamental step in phylogenetic inference, as it allows the study of macroevolutionary processes such
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Laura Mulvey @lauramulvey.bsky.social · 14/05/2026
📣 10 days left to register for our workshop: Bridging Stratigraphic Palaeobiology and Phylogenetics Questions? Reach out to any of the organisers: @rachelwarnock.bsky.social @niklashohmann.bsky.social More information and registration 👉 www.lorentzcenter.nl/site/index.p...
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Dr John Clarke @jclarkepaleo.bsky.social · 30/03/2026
Postdoc in Macroevolution - Deadline April 12th - Join a team of Stuttgart botanists & myself to test drivers of Angiosperm diversification! Fully open process Submit cover letter, CV, 3 referees & publication list in a single PDF to postdoc-botany@smns-bw.de + 3 key papers (if possible) as PDF
naturkundemuseum-bw.de
Jobs | Staatliches Museum für Naturkunde Stuttgart
Offene Stellen
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Natalie Cooper @nhcooper123.bsky.social · 25/03/2026
Hi all. I am very excited that after 6 years I finally got my phylogenetic comparative methods book and online exercises online. Feel free to use and share. The book is here: nhcooper123.github.io/pcm-primer/. Note that it is not finished, we had to abandon it before the sunk costs fallacy broke us
nhcooper123.github.io
Phylogenetic Comparative Methods
Phylogenetic Comparative Methods
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Rachel Warnock @rachelwarnock.bsky.social · 13/03/2026
I’m looking for a post doc (up to five years) interested in phylogenetics and earth systems - please spread the word!
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PaleoSynthesis @paleosynth.bsky.social · 12/03/2026
🤓 New M.Sc. program: Earth System Dynamics & Evolution 🤓 fau-earth-system-science.github.io starting October 2026! PostDoc positions available
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Evolution Letters @evolletters.bsky.social · 10/03/2026
Diversification rate shifts are everywhere. Analyses of phylogenies covering >300k species reveal widespread changes in speciation dynamics across the Tree of Life. @bjorntko.bsky.social @hoehna.bsky.social @acapomorphic.bsky.social ‬ academic.oup.com/evlett/advan...
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SPP 2349 Gevol @gevol.bsky.social · 09/03/2026
You want to work on Transcriptional Regulation in Beetles 🐞? Join our GEvol Community and work with many great people ➡️ Two open PhD positions in @bfeldmeyer.bsky.social lab in Frankfurt: g-evol.uni-muenster.de/open-positio...
g-evol.uni-muenster.de
Open Positions – GEvol – DFG SPP 2349
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Dr John Clarke @jclarkepaleo.bsky.social · 04/03/2026
Our new paper revealing major patterns of diversification across the Tree of Life is here! doi.org/10.1093/evle... Congratulations to @bjorntko.bsky.social for leading this ambitious effort, it was a pleasure to contribute alongside @acapomorphic.bsky.social, @hoehna.bsky.social & Luis Palazzesi.
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Alessio Capobianco @acapomorphic.bsky.social · 04/03/2026
New paper out from @hoehna.bsky.social Lab, led by the brilliant @bjorntko.bsky.social! We applied the Pesto software (Kopperud & Höhna, 2025) to look at lineage-specific shifts in diversification rate on large, densely-sampled phylogenies across the Tree of Life doi.org/10.1093/evle...
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𝙱𝙰𝚂𝙰𝙽𝚃𝙰 𝙺𝙷𝙰𝙺𝚄𝚁𝙴𝙻 @basantakhakurel.bsky.social · 25/02/2026
Our new paper 'A covarion model for phylogenetic estimation using discrete morphological datasets,' is out in SysBio! We introduce the "covariomorph" model in RevBayes to capture character and lineage specific rates of morphological traits. 🔗 doi.org/10.1093/sysb...
doi.org
A covarion model for phylogenetic estimation using discrete morphological datasets
Abstract. The rate of evolution of a single morphological character is not homogeneous across the phylogeny and this rate heterogeneity varies between morp
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Raymond Castillo @raymondcast.bsky.social · 15/01/2026
Had a great post-SSB hackathon with the RevBayes crew! Got tons of work done on both RevBayes and RevGadgets! Special thanks to @trayc7.bsky.social @jembrown.bsky.social for organizing and hosting!
Evolving RevBayes into an Open-Source Ecosystem
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Bob Thomson @rcthomson.bsky.social · 16/01/2026
Systematic Biology’s January 2026 issue (75.1) is out! It launches our 75th anniversary series, debuts the new Invited Review article category, features a Tillandsia Spotlight, along with a nice mix of empirical & methods papers. Check it out: academic.oup.com/sysbio/issue... @systbiol.bsky.social
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Sandra Álvarez @sabifo4.bsky.social · 16/01/2026
Applications to join the Computational Approaches to Early Evolution workshop are still accepted! Do not miss your chance to attend this event full of discussions on the computational methods for studying early life! 🦠💻🧬 forms.oist.jp/form/computa...
forms.oist.jp
Registration for Computational Approaches to Early Evolution | Forms
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Jeremy M. Brown @jembrown.bsky.social · 09/01/2026
Interested in trying to use RevBayes for the first time? Need help planning or debugging a phylogenetic analysis? Check out the RevBayes Office Hours! In the University Room this morning and the King Room this afternoon. revbayes.github.io @systbiol.bsky.social #SSB2026
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Alexis Stamatakis @stamatak.bsky.social · 15/12/2025
Permanent Research Group Leader Position, Crete, Greece: Interested to assume long-term responsibilities for the Biodiversity Computing Group www.biocomp.gr I have set up in Crete? Apply now via apella.minedu.gov.gr/en/node/5998 (PDF also in English) - for questions email to stamatak@ics.forth.gr
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Sebastian Höhna @hoehna.bsky.social · 27/11/2025
Deadline soon (end of Nov) for this PhD position in evolutionary genomics/bioinformatics in my group.
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SPP 2349 Gevol @gevol.bsky.social · 26/11/2025
📢 Job alert: Post-Doc Position in the project "Functional annotation of genomic🧬 innovations in a densely populated clade🪰 with deep learning 💻" Join the GEvol community in a collaborative project between @bornberglab.bsky.social and @katharinahoff.bsky.social lab. 👉 bornberglab.org/post-doc-pos...
bornberglab.org
Post-Doc – bornberglab.org
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Dirk Metzler @dirkmetzler.bsky.social · 26/11/2025
PhD position available for theoretical and statistical modeling in my joint @gevol.bsky.social project with @luisapallares.bsky.social on the evolution of transcriptional variability and its role in adaptation and evolutionary innovation. See job-portal.lmu.de/jobposting/6...
job-portal.lmu.de
PhD candidate in biology — theoretical and statistical modeling (m/f/x)
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Ricardo J Pereira @biodiversitysmns.bsky.social · 25/11/2025
Join today our online colloquium to learn about the evolution of feather like structures 250 millions ago, before dinosaurs were around! @kombiota.bsky.social
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Nico Posnien @posnienlab.bsky.social · 18/11/2025
🧬 PhD Position: Evolutionary & Comparative Genomics 🕷️ Join us at @uni-goettingen.de for a 3-year PhD (65% TV-L E13). We will investigate the genomic & phenotypic impact of gene duplication across 233 arthropod genomes! More infos 👇 and s.gwdg.de/eDrAAY #Evolution #Genomics #Bioinformatics
s.gwdg.de
Posnien - Georg-August-Universität Göttingen
Webseiten der Georg-August-Universität Göttingen
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Alessio Capobianco @acapomorphic.bsky.social · 11/11/2025
I'll be presenting a poster at #2025SVP #SVP2025 about my recently published work on how many characters are needed to reconstruct a phylogeny. Come by at the poster session this Thursday if you want to chat about it! royalsocietypublishing.org/doi/abs/10.1...
royalsocietypublishing.org
How many characters are needed to reconstruct a phylogeny? | Biology Letters
Despite increased recent attention towards Bayesian phylogenetics and its applications in understanding macroevolutionary processes, it remains unclear how many discrete characters are needed to accur...
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Sebastian Höhna @hoehna.bsky.social · 11/11/2025
PhD position available in evolutionary genomics/bioinformatics (hoehnalab.github.io/job_adverts/...). Topic: analyzing gene expression evolution across several firefly species and linking expression changes to genomic architecture. The position is jointly supervised with @anaevolcatalan.bsky.social
hoehnalab.github.io
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SPP 2349 Gevol @gevol.bsky.social · 10/11/2025
🎉We are happy to announce that our wonderful GEvol SPP will be funded by @dfg.de for another 3 years. Included are 17 great projects all over Germany with amazing people. You want to be part of this fantastic community? Soon you can find new PhD/Post-Doc positions here & on our website. Stay tuned🎉
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Royal Society Publishing @royalsocietypublishing.org · 21/10/2025
#BiologyLetters How many characters are needed to reconstruct a phylogeny? Find out more: royalsocietypublishing.org/doi/10.1098/... #evolution #palaeontology #taxonomyandsystematics
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Alessio Capobianco @acapomorphic.bsky.social · 15/10/2025
Out now in Biology Letters, my latest paper tackles an apparently simple question: how many characters are needed to reconstruct a phylogeny? TL;DR: in most cases between 100 and 500, more than a substantial portion of morphological datasets, but the story is more complex... doi.org/10.1098/rsbl...
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Alessio Capobianco @acapomorphic.bsky.social · 25/09/2025
I am extremely happy to see that our review on fossil tip-dating is out in early view in Systematic Biology! A huge thanks to all the authors of this massive project (@heckeberg.bsky.social, @basantakhakurel.bsky.social, Gustavo Darlim, and @hoehna.bsky.social)! academic.oup.com/sysbio/advan...
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Alessio Capobianco @acapomorphic.bsky.social · 19/09/2025
We (me, @barankarapunar.bsky.social, @sinjinis.bsky.social and @harriedrage.bsky.social) organized a symposium for the next IPC (Cape Town 2026!) on evolution, diversity and ecology in marine ecosystems throughout the Phanerozoic. Contact us if you would like to participate or to know more about it!
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Thijs Janzen @thijsjanzen.bsky.social · 28/08/2025
This study by @hoehna.bsky.social and coauthors seems very reassuring: where we often pick partition specific models rather ad-hoc, it appears these do not influence divergence time estimations. (I would still love to see a densitree plot though!) www.biorxiv.org/content/10.1...
biorxiv.org
Impact of Partition Models on Phylogenetic Inference and Divergence Times of Lampyridae from Mitochondrial Genomes
Mitochondrial genomes are frequently used for phylogenetic inference due to their availability and cost-efficient sequencing. In most mitogenomic phylogenetic analyses, only the two ribosomal RNA and ...
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Pedro Godoy @pedrolgodoy.bsky.social · 01/08/2025
Proud supervisor moment! 🥹🤩 So incredible to watch our undergrad students from the lab shine in front of such a knowledgeable audience at @cpeg-cpb25.bsky.social. They absolutely crushed it and I couldn’t be prouder! @fernandalandim.bsky.social, Anna Clara Annes, Jorge Silva and Gabriela Karam.
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🧬Jacob L Steenwyk @jlsteenwyk.bsky.social · 22/07/2025
Excited to share that I will be a co-director for the upcoming Workshop on Phylogenomics @evomics.bsky.social, alongside the amazing main team lead @rosafernandez.bsky.social and Erin K. Molloy We are putting together an amazing workshop with details to come - can't wait to share it with everyone!🥳
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Ana Catalán @anaevolcatalan.bsky.social · 24/06/2025
Female neoteny does have an impact on colonization patterns in the big European firefly, Lampyris noctiluca ✨
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Alessio Capobianco @acapomorphic.bsky.social · 10/07/2025
We now have protein sequences from rhino enamel that are >20 million years old! I am extremely excited and grateful to have been part of this project. The incredible thing: these sequences are informative enough to place this ancient species in the rhino tree! www.nature.com/articles/s41...
nature.com
Phylogenetically informative proteins from an Early Miocene rhinocerotid - Nature
Protein sequences from fossil tooth enamel of a rhinocerotid from Canada’s High Arctic are used to develop phylogenetic frameworks from a specimen too old to preserve ancient DNA.
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Matt Friedman @friedmanlab.bsky.social · 11/07/2025
The study finding phylogenetically informative proteomic data in a 20+ Myr rhino from Arctic Canada--and mind blowingly including this Miocene sequence in a tip-dated analysis--counts 2021 PhD Alessio Capobianco (now postdoc, LMU Munich) among the authors: www.nature.com/articles/s41...
nature.com
Phylogenetically informative proteins from an Early Miocene rhinocerotid - Nature
Protein sequences from fossil tooth enamel of a rhinocerotid from Canada’s High Arctic are used to develop phylogenetic frameworks from a specimen too old to preserve ancient DNA.
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Matt Friedman @friedmanlab.bsky.social · 11/07/2025
This week, two papers in @nature.com reported informative ancient proteins from Early Miocene (!) mammals. What I've realized now that I've had a chance to actually look at them: *both* studies include UMMP alums and/or current researchers as authors. Neat. 🦏🦷🧬 www.nature.com/articles/d41...
nature.com
Ancient proteins rewrite the rhino family tree — are dinosaurs next?
Molecules from 20-million-year-old teeth are among the oldest ever sequenced.
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Dr. Mathilde Cordellier @mcordellier.bsky.social · 10/07/2025
Job alert! I am looking for someone who would like to join my lab as a senior researcher, permanent, with teaching included. My lab is new, I still have startup money, just sayin. DM or email me with questions. Deadline Aug. 11th, interviews in september. Ad here: jobs.uni-rostock.de/jobposting/c...
jobs.uni-rostock.de
Research Assistant (m/f/d) - Population Genomics/Evolutionary Genomics
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Nature @nature.com · 09/07/2025
Molecules from 20-million-year-old rhino-relative teeth are among the oldest ever sequenced go.nature.com/4lFx4KN
go.nature.com
Ancient proteins rewrite the rhino family tree — are dinosaurs next?
Molecules from 20-million-year-old teeth are among the oldest ever sequenced.
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𝙱𝙰𝚂𝙰𝙽𝚃𝙰 𝙺𝙷𝙰𝙺𝚄𝚁𝙴𝙻 @basantakhakurel.bsky.social · 27/06/2025
🆕 Preprint now on bioRxiv! We introduce a covarion model for phylogenetic inference using discrete morphological data, addressing lineage- and character-specific rate heterogeneity. www.biorxiv.org/content/10.1... #phylogenetics #morphology #covarion #evolution
biorxiv.org
A covarion model for phylogenetic estimation using discrete morphological datasets
The rate of evolution of a single morphological character is not homogeneous across the phylogeny and this rate heterogeneity varies between morphological characters. However, traditional models of mo...
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Ana Catalán @anaevolcatalan.bsky.social · 24/06/2025
This work shows the first overview on the population genetics and demographic history of the big European firefly, **Lampyris noctiluca**. Feeling very happy this work is out :) academic.oup.com/mbe/article/...
academic.oup.com
Sex-biased Migration and Demographic History of the Big European Firefly Lampyris noctiluca
Abstract. Differential dispersion between the sexes can impact the colonization process and demographic history of a species. Here, we explored the demogra
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April Wright @wrightam.bsky.social · 23/06/2025
@basantakhakurel.bsky.social Doing such a great talk, clearly explaining his convarion model for morphological characters and its performance relative to Mk Model. Preprint coming soon!
A man giving a talk in front of the screen
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Molecular Biology and Evolution @molbioevol.bsky.social · 24/06/2025
@anaevolcatalan.bsky.social @hoehna.bsky.social @stusso.bsky.social @ulrikacandolin.bsky.social et al. analyse genomes of the European firefly, revealing a complex demographic history shaped by glaciation and sex-biased dispersal. 🔗 academic.oup.com/mbe/article/42/6/msaf123/8170119 #evobio #molbio
academic.oup.com
Sex-biased Migration and Demographic History of the Big European Firefly Lampyris noctiluca
Abstract. Differential dispersion between the sexes can impact the colonization process and demographic history of a species. Here, we explored the demogra
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Stephane Guindon @stephaneguindon.bsky.social · 23/05/2025
Thanks a lot Granada for hosting us in 2025! It was a real blast. Fantastic venue, marvellous city. Many thanks to the local organizers: A. Jesús Muñoz-Pajares and Mohamed Abdelaziz Mohamed. #MCEB2025
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Mozes Blom @moosblom.bsky.social · 22/05/2025
🚨 Wanted: PhD student excited about population genomics, Natural History Collections and birds! 📍 Museum für Naturkunde, Berlin, Germany 🕒 3 Years, fully funded by the Leibniz Junior Researchgroup program Details and Application portal 👇 jobs.museumfuernaturkunde.berlin/jobposting/8...
jobs.museumfuernaturkunde.berlin
14/2025 PhD student (f/m/d)
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European Commission @ec.europa.eu · 08/05/2025
Choose Science. Choose Europe. A new Marie Skłodowska-Curie Actions Postdoctoral Fellowships 2025 call is now open. With a budget of €404.3 million, it will support around 1,650 researchers from Europe and beyond. Apply by 10 September → europa.eu/!fBTMgF
A graphic for the Marie Skłodowska-Curie Actions (MSCA), showing a historical portrait of Marie Skłodowska-Curie overlaid with an image of four young researchers walking down a hallway. The European Commission logo is in the top left. Text reads: "Marie Skłodowska-Curie Actions – €404.3 million to support postdoctoral researchers”
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Sebastian Höhna @hoehna.bsky.social · 09/05/2025
New call for the MSCA postdoctoral fellowships. This is a really great opportunity. marie-sklodowska-curie-actions.ec.europa.eu/news/msca-op...
marie-sklodowska-curie-actions.ec.europa.eu
MSCA opens €404.3 million call for Postdoctoral Fellowships
Postdoctoral Fellowships offer researchers holding a PhD the opportunity to acquire new skills through advanced training and international, interdisciplinary, and inter-sectoral mobility.
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Richard Merrill @dickmerrill.bsky.social · 22/04/2025
Really excited that our DFG grant on the Speciation Genomics of Eye Size variation in *Heliconius* has been funded :) In the next weeks, I will post an advert for a PhD, but if you know of good students, please suggest they get in touch. Please repost.
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Katharina Hoff @katharinahoff.bsky.social · 21/04/2025
Annotation of 200 insect genomes. Work driven by @stepbystepsolution.bsky.social and Mario Stanke within @gevol.bsky.social : www.biorxiv.org/content/10.1...
biorxiv.org
Annotation of 200 Insect Genomes with BRAKER for Consistent Comparisons across Species
The annotation of genomes lags behind their sequencing and assembly. For example, of 5,092 insect species in GenBank, as one of the most widely used databases, only 375 currently have annotated genome...
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Ricardo J Pereira @biodiversitysmns.bsky.social · 08/04/2025
🦤🧬🧑‍🔬 Junior Group Leader in Conservation Genomics Wanted! 🪲🌿🔬 Help bridge gaps between evolutionary genetics & conservation with museum and monitoring collections. 🔗 Info: tinyurl.com/biodivgen ⏰ Deadline: June 15th 📩 Contact me! 🚀 Excited to explore new horizons! Please share 🕊️
tinyurl.com
Jobs | Staatliches Museum für Naturkunde Stuttgart
Open positions
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