nature.com
DeepSeMS: revealing the hidden biosynthetic potential of the global ocean microbiome with a large language model
Clardy, J. & Walsh, C. Lessons from natural molecules. Nature 432, 829–837 (2004). Xu, T. et al. NPBS Atlas: a comprehensive data resource for exploring the biological sources of natural products. J. Cheminform. 17, 172 (2025). Newman, D. J. & Cragg, G. M. Natural products as sources of new drugs over the nearly four decades from 01/1981 to 09/2019. J. Nat. Prod. 83, 770–803 (2020). Koehn, F. E. & Carter, G. T. The evolving role of natural products in drug discovery. Nat. Rev. Drug Discov. 4, 206–220 (2005). Vanni, C. et al. Unifying the known and unknown microbial coding sequence space. eLife 11, e67667 (2022). Wirbel, J., Bhatt, A. S. & Probst, A. J. The journey to understand previously unknown microbial genes. Nature 626, 267–269 (2024). Scherlach, K. & Hertweck, C. Mining and unearthing hidden biosynthetic potential. Nat. Commun. 12, 3864 (2021). Medema, M. H. et al. antiSMASH: rapid identification, annotation and analysis of secondary metabolite biosynthesis gene clusters in bacterial and fungal genome sequences. Nucleic Acids Res. 39, W339–W346 (2011). Skinnider, M. A. et al. Genomes to natural products PRediction Informatics for Secondary Metabolomes (PRISM). Nucleic Acids Res. 43, 9645–9662 (2015). Hannigan, G. D. et al. A deep learning...