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Deepanshu Singh

@deepanshund.bsky.social
178 followers 424 following 14 posts

Post-Doc researcher at University of Manchester Drosophila neurobiology, Alternative splicing, Sex-peptide and Infection

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Reposted by Deepanshu Singh
Matthias Soller @matthiassoller.bsky.social · 20/08/2026
Thanks to @yuantian23.bsky.social our preview: A splicing twist from Ψ authors.elsevier.com/a/1neIF3vVUP... [kwnsfk27.r.eu-west-1.awstrack.me] www.cell.com/molecular-ce...
cell.com
A splicing twist from Ψ
In this issue of Molecular Cell, Meng et al. identify a reader for pseudouridine (Ψ) in mRNA. Ψ increases binding of SMD2, a member of the SM protein ring surrounding spliceosomal U1 and U2 snRNAs, an...
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Deepanshu Singh @deepanshund.bsky.social · 21/08/2026
Excited to share our latest pre-print. Here we uncover a new role of Dpp/BMP signalling in regulating neuronal wiring of Sex Peptide Response Inducing Neurons (SPRINz). Thanks to @matthiassoller.bsky.social #drosophila #sexpeptide #BMP #Dpp #neuroconnectivity www.biorxiv.org/content/10.6...
biorxiv.org
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Andreas Prokop @poppi62.bsky.social · 08/08/2026
Over 15 years of our work consistently supports a cohesive model of neurodegeneration providing useful concepts and directions for future research: "the dependency cycle of local axon homeostasis". Enjoy the read of our completely revamped manuscript: doi.org/10.1101/2025... (PDF fixed)
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Matthias Soller @matthiassoller.bsky.social · 11/02/2026
See our fantastic story in @elife.bsky.social from Karthik Nallasivan and @deepanshund.bsky.social well distilled by our press office champion Michel Addelman @mcf-uom.bsky.social @fbmh-uom.bsky.social elifesciences.org/reviewed-pre... www.manchester.ac.uk/about/news/f...
manchester.ac.uk
Fruit fly study reveals how mating triggers behavioural changes in females
Researchers from The Universities of Manchester and Birmingham have identified the exact nerve cells in the brain that drive important behavioural changes in female fruit flies after they mate.The dis...
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Deepanshu Singh @deepanshund.bsky.social · 11/02/2026
Delighted to share that our story is out in eLife! Here are some "SPRINZ" for you. Big thanks to Karthik and @matthiassoller.bsky.social. @mcf-uom.bsky.social @fbmh-uom.bsky.social . Social published in @elife.bsky.social
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Pawel Grzechnik @grzechnikpawel.bsky.social · 08/02/2026
Interested in antisense oligonucleotides? Check our story about downstream-of-gene ASOs (DG-ASOs)! Together with the Roche Innovation Center we identified transcription termination windows of protein-coding genes as ASO target regions. link to BioRxiv: www.biorxiv.org/content/10.6...
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Reposted by Deepanshu Singh
Matthias Soller @matthiassoller.bsky.social · 08/01/2026
Excited to share our first publication of the year @mcf-uom.bsky.social . Here is a very detailed protocol how to do band-shift assays thanks to @davidmcquarrie.bsky.social and for the invitation @kifla.bsky.social bio-protocol.org/en/bpdetail?...
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Deepanshu Singh @deepanshund.bsky.social · 17/12/2025
Thank you @clarahowcroft.bsky.social (@northumbriauni.bsky.social) for an engaging talk on mechanism underlying group behaviour. It was a pleasure to host you at the #ManchesterFlyClub (@mcf-uom.bsky.social)🧬🪰
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Deepanshu Singh @deepanshund.bsky.social · 17/11/2025
It was a pleasure to host Dr Ines Hahn (University of York) @exdrososcientia.bsky.social for the Manchester Fly Club, where she delivered a fantastic talk on GSK-3β’s role in organising microtubules and maintaining mitochondrial homeostasis. #FlySeminar #ManchesterFlyClub
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Matthias Soller @matthiassoller.bsky.social · 12/09/2025
Published in the summer holidays: Roles for TET in speckles. Thanks @cardosolab.bsky.social @deepanshund.bsky.social @roliarnold.bsky.social and the others for this exciting collaboration. www.tandfonline.com/doi/10.1080/...
tandfonline.com
TET dioxygenases localize at splicing speckles and promote RNA splicing
The dynamic regulation of RNA metabolism plays a crucial part in cellular function, with emerging evidence suggesting an important role for RNA modifications in this process. This study explores th...
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Reposted by Deepanshu Singh
Kurianlab @kurianlab.bsky.social · 08/09/2025
Many conserved exons in the heart and brain utilize weak 5 ′ splice sites, yet they are accurately spliced. But how? We show that splicing fidelity is actively enforced through a QKI-U6 checkpoint at the U1→U6 handover in essential cardiac genes during organogenesis. www.biorxiv.org/content/10.1...
biorxiv.org
QKI ensures splicing fidelity during cardiogenesis by engaging the U6 tri-snRNP to activate splicing at weak 5ʹ splice sites
During organogenesis, precise pre-mRNA splicing is essential to assemble tissue architecture. Many developmentally essential exons bear weak 5'splice sites (5'SS) yet are spliced with high precision, ...
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Reposted by Deepanshu Singh
Jenny Regan @jennyregan.bsky.social · 11/07/2025
New preprint - varied routes to ⬆️ infection susceptibility over age - via bona fide immunosenescence, but also often via reduced tolerance 🪰🕰️🦠☠️ ⬆️ risk to die from infection predicts lifespan in males. Great group effort from the lab! www.biorxiv.org/content/10.1...
biorxiv.org
Different ways to die: harnessing variation in Drosophila reveals loss of tolerance and resistance over age and sex-specific association between infection susceptibility and lifespan
It is widely accepted that susceptibility to infection increases with age. The reason often invoked is the dysregulation of the immune system, which is both cause and consequence of ageing. However, w...
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Deepanshu Singh @deepanshund.bsky.social · 04/07/2025
Engaging young minds with tiny flies! Fantastic outreach session introducing Drosophila as a model to explore brain, behaviour, and disease. Big thanks to Sanjai Patel for organizing the event and @rituparna-uom24.bsky.social @matthiassoller.bsky.social #FlyLab #Drosophila #Outreach
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Reposted by Deepanshu Singh
Carolina Rezaval @crezaval.bsky.social · 26/06/2025
We're hiring! Two exciting opportunities in our Lab @unibirmingham.bsky.social Come work with us on decision-making and neural circuits in Drosophila. Please share! Senior Research Technician + Postdoctoral Research Fellow Deadline: 10 July More info here: www.rezavallab.org
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Deepanshu Singh @deepanshund.bsky.social · 23/06/2025
Big thanks to @clarahowcroft.bsky.social y.social, @toraks.bsky.social ks.bsky.social, @dpdoupe.bsky.social for organising the first NE Fly Meeting! It was inspiring to see the Northern Drosophila community come together with such warmth and energy. Here’s to more science, support, and shared ideas!
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Deepanshu Singh @deepanshund.bsky.social · 23/06/2025
A post-meeting hub for North England Drosophilists — to share, connect, and collaborate beyond the room. Please share and add more people to this starter pack. go.bsky.app/KJXNZVg
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Matthias Soller @matthiassoller.bsky.social · 27/05/2025
New insights into alternative splicing of ever fascinating Down syndrome Cell Adhesion Molecule in Drosophila and honey bees thanks to @annalassota.bsky.social and T.C.Dix. www.biorxiv.org/content/10.1...
biorxiv.org
Stochastic splicing and deterministic inclusion of exon variables promote diversification of Down Syndrome Cell Adhesion Molecule expression
Mutually alternative splicing in Down Syndrome Cell Adhesion Molecule ( Dscam ) gene of arthropods generates extraordinary molecular diversity producing tens of thousands of isoforms. From three clust...
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Deepanshu Singh @deepanshund.bsky.social · 29/05/2025
Honoured to be invited for a talk at IISER Tirupati! Grateful for the warm welcome — it was a real pleasure catching up with the brilliant faculty and curious minds of IISER. Until next time! 🍄🧬🐞
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Reposted by Deepanshu Singh
Timothy Bredy @twbredy.bsky.social · 29/03/2025
Here's the link to our latest review, emphasizing the tools required to dig into the RNA world in the brain. doi.org/10.1016/j.nl...
doi.org
Redirecting
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Matthias Soller @matthiassoller.bsky.social · 23/03/2025
We paid ~£80 to validate our CRISPR edit - still a good price. www.biorxiv.org/content/10.1...
biorxiv.org
Assessing species-specific neonicotinoid toxicity using cross-species chimeric nicotinic acetylcholine receptors in a Drosophila model
Nicotinic acetylcholine receptors (nAChRs) are ligand-gated ion channels and the main mediators of synaptic neurotransmission in the insect brain. In insects, nAChRs are pivotal for sensory processing...
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Reposted by Deepanshu Singh
Matthias Soller @matthiassoller.bsky.social · 10/03/2025
Male quality assessment: Venerose seminal fluid sugar sensed by female brain neurons after mating. See our comment thanks to @deepanshund.bsky.social about an exiting story from the Young-Joon Kim lab. www.tandfonline.com/doi/epdf/10....
tandfonline.com
Venerose: a nuptial gift with implications
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PLOS Biology @plosbiology.org · 17/02/2025
Fungus on the brain. @deepanshund.bsky.social @aliciahidalgolab.bsky.social &co show that the #fungus Beauveria bassiana exploits the Toll-1 host response to activate the MyD88 inhibitor Sarm, enabling immune evasion and triggering #neurodegeneration in #Drosophila 🧪 @plosbiology.org plos.io/3EIxgZN
Beauveria bassiana was detected within the fly brain. Neurons are stained with DAPI (magenta) and B. bassiana with GFP (green). Left: whole brain view. Middle column: germlings or germinating spores colocalise with the neuronal marker DAPI and (right-hand column) have filaments.
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Deepanshu Singh @deepanshund.bsky.social · 14/02/2025
🚨 Our paper out in @plosbiology.org! A fungal pathogen hijacks #immune receptor to drive immune evasion and cause #neurodegeneration in the brain. Thanks to the incredible @aliciahidalgolab.bsky.social, our amazing collaborators and the funding from DarwinTrust, @wellcometrust.bsky.social & BBSRC.
journals.plos.org
Toll-1-dependent immune evasion induced by fungal infection leads to cell loss in the Drosophila brain
This study identifies a new step in the evolutionary arms race between host and fungus in the Drosophila brain. The fungus B. bassiana exploits the Toll-1 host response to activate the MyD88 inhibitor...
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Reposted by Deepanshu Singh
Alicia Hidalgo Lab @aliciahidalgolab.bsky.social · 13/02/2025
Thrilled to see our paper out today @plosbiology.org! By wonderful PhD student @deepanshund.bsky.social & great team of collaborating authors. Fungi hack immune receptor to drive immune evasion in the brain & cause neurodegeration. Thanx DarwinTrust @wellcometrust.bsky.social @BBSRC for funding. 😃
journals.plos.org
Toll-1-dependent immune evasion induced by fungal infection leads to cell loss in the Drosophila brain
This study identifies a new step in the evolutionary arms race between host and fungus in the Drosophila brain. The fungus B. bassiana exploits the Toll-1 host response to activate the MyD88 inhibitor...
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Matthias Soller @matthiassoller.bsky.social · 01/02/2025
Doing CRISPR: Check out our PlatinumCRISPr server update now including Cas12a sgRNA selection, thanks to @roliarnold.bsky.social
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Andreas Prokop @poppi62.bsky.social · 15/01/2025
Or what about the #Drosophila computer game? Loads of stuff that I almost forgot about: scratch.mit.edu/projects/744...
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Reposted by Deepanshu Singh
Greg Hurst @greghurst.bsky.social · 15/01/2025
New preprint from @haraipapilio.bsky.social with @bolinabug.bsky.social @daisukekageyama.bsky.social and others not on bluesky #symbiosky www.biorxiv.org/content/10.1...
biorxiv.org
Evolution of Wolbachia male-killing mechanism within a host species
Male-killing bacterial symbionts, prevalent in arthropods, skew population sex ratios by selectively killing male progeny, profoundly impacting ecology and evolution of their hosts. Male-killing is a ...
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Reposted by Deepanshu Singh
Kurianlab @kurianlab.bsky.social · 14/01/2025
www.cell.com/molecular-ce...
cell.com
Structural basis of 5′ splice site recognition by the minor spliceosome
Zhao et al. present two cryo-EM structures of apo and substrate-bound U11 snRNP complexes, elucidating their architecture and the mechanism of the U12-type 5′ splice site recognition. The unique struc...
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Reposted by Deepanshu Singh
Ryusuke Niwa @ryuniwa.bsky.social · 10/01/2025
Excited to see our new gut hormone paper in @naturecomms.bsky.social in collaboration with our alumnus Dr. Yuto Yoshinari (Gunma Univ.) and others! A high-protein diet-responsive gut hormone regulates behavioral and metabolic optimization in Drosophila melanogaster. www.nature.com/articles/s41...
nature.com
A high-protein diet-responsive gut hormone regulates behavioral and metabolic optimization in Drosophila melanogaster - Nature Communications
Organisms regulate their feeding behavior to prevent overconsumption of certain nutrients. Here, the authors identify the importance of gut hormones in suppressing protein overfeeding.
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Deepanshu Singh @deepanshund.bsky.social · 09/01/2025
What an engaging talk by Fiona Whelan @whelanfj.bsky.social , who recently moved her group to Manchester from Nottingham! Thank you all for attending the session and contributing to such an interesting discussion. @mcf-uom.bsky.social @official-uom.bsky.social #manchesterflyclub
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Deepanshu Singh @deepanshund.bsky.social · 22/12/2024
Excited to share our new paper on molecular mechanism for circuit structural plasticity in the Drosophila adult brain. Congratulations @aliciahidalgolab.bsky.social and the amazing postdocs Dr. Jun Sun, Dr. Fran Rojo-Cortes & all contributing authors. doi.org/10.7554/eLif... doi.org/10.7554/eLif...
doi.org
A neurotrophin functioning with a Toll regulates structural plasticity in a dopaminergic circuit
A novel molecular mechanism linking a neurotrophin with a Toll-family and kinase-less Trk-like receptors provides a direct link from molecules to structural circuit plasticity and modification of beha...
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Deepanshu Singh @deepanshund.bsky.social · 10/12/2024
Incredible energy at the 7th Insect Reproductive Molecules Meeting at Rydal Hall! 🚀 Huge thanks to Prof. Matthias Soller @matthiassoller.bsky.social and Prof. Tracey Chapmen for co-organizing and @gensocuk.bsky.social for the funding. 🧬✨ #InsectReproduction #lakedistrict #RydalHall
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Matthias Soller @matthiassoller.bsky.social · 09/12/2024
Fantastic talks at the 7th Insect Reproductive Molecules Meeting at Rydal Hall. Thanks to Tracey Chapman @deepanshund.bsky.social for co-organizing and @gensocuk.bsky.social for support.
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Matthias Soller @matthiassoller.bsky.social · 13/11/2024
Excited to share our new paper describing how ELAV/Hu RNA binding proteins achieve binding specificity now in NAR thanks to fantastic @davidmcquarrie.bsky.social academic.oup.com/nar/article/...
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