iiinova — where your digital self keeps evolving

Reposted by Jonathan Jacobs

Jonathan Jacobs @bioinformer.bsky.social · 24/09/2026

ATCC Genome Portal Q3 2026 Release out Monday! genomes.atcc.org previews... New genome assemblies: 207 bacterial, 24 fungal, 15 viral. Plus new RNAseq datasets for 51 human cell lines and organoids (255 total samples, typically N=5 per line) #genomics #bioinformatics #aixbio #referencedata #NGS

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Jonathan Jacobs @bioinformer.bsky.social · 29/09/2026

Well - at least we still have a edge for a little while longer...

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Jonathan Jacobs @bioinformer.bsky.social · 24/09/2026

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Reposted by Jonathan Jacobs

Magdalena Skipper @magdalenaskipper.bsky.social · 20/08/2026

Exclusive: NSF set to issue lowest number of new grants in four decades www.nature.com/articles/d41... 🧪 #AcademicSky @nature.com

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Reposted by Jonathan Jacobs

Jeff Dillon Fine Art @jeffdillonfineart.bsky.social · 07/07/2026

My name is Jeff Dillon and I'm a Canadian landscape painter. This is my art and I'd love to hear what you think. Jeff #art

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Jonathan Jacobs @bioinformer.bsky.social · 12/06/2026

I can not believe this is a legitimate journal… And if you haven’t looked into the fast paced and growing field of necrobots… please do. And please stick to the PEER REVIEWED papers only.

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Jonathan Jacobs @bioinformer.bsky.social · 12/06/2026

Seems I’ve caught the writing bug. This is sort of follow up to my first SubStack post last week. Please take a look, repost and restack as well. Thank you!🙏 open.substack.com/pub/bioinfor...

open.substack.com

Reproducible Does Not Mean Correct

Reproducible Wrongness: When Genomics Gets the Same Answer for the Wrong Reason

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Jonathan Jacobs @bioinformer.bsky.social · 07/06/2026

If you’re attending #ASMicrobe today and the #metadata / #microbiome dark matter session - you may be interested in my recent Substack article and preprint on this broad issue across all of #genomics open.substack.com/pub/bioinfor... interested? Send me a DM and let’s chat!

open.substack.com

Metadata as Infrastructure

Genomics data provenance and quality are something we can't ignore anymore

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Reposted by Jonathan Jacobs

Jonathan Jacobs @bioinformer.bsky.social · 06/06/2026

Metadata as Infrastructure. I finally created a Substack! My first post is on a topic that I probably spend entirely too much time worrying about. 😊 please reshare with your #genomics and #bioinformatics peeps! 🙏 🧬🦠🔬📊🧫🚀 substack.com/home/post/p-... #ASMicrobe #digitalbiology #biotech #biopharma

substack.com

Metadata as Infrastructure

Genomics data provenance and quality are something we can't ignore anymore

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Jonathan Jacobs @bioinformer.bsky.social · 06/06/2026

Join ATCC’s Industry & Science Showcase today at the #ASMMicrobe conference and enjoy lunch on us while you learn. Discover how ATCC is supporting scientists in the fight against antimicrobial resistance with trusted strains and robust genomic resources. ow.ly/iv0950Z80wg

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Jonathan Jacobs @bioinformer.bsky.social · 06/06/2026

substack.com

Metadata as Infrastructure

Genomics data provenance and quality are something we can't ignore anymore

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Jonathan Jacobs @bioinformer.bsky.social · 06/06/2026

Hey #genomics and #bioinformatics community: I need an "endorsement" in order to submit a preprint to @arxiv.bsky.social 😭 I'm registered, but can't submit our preprint to q-bio\GN (Genomics) section until we get an endorsement from an existing arXiv author w/endorse privileges. that you? plz DM me🙏

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Reposted by Jonathan Jacobs

Kaz Windness she/her @kazwindness.bsky.social · 05/06/2026

Make art with your hands. It’s what humans do. #noAI #artistssupportingartists #humanart

A graphic by author illustrator Kaz Windness that says make art with your human hands. And shows colorful hand outlines pressed up against the wall with colorful splatters behind them, reminiscent of hands in caves.

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Jonathan Jacobs @bioinformer.bsky.social · 05/06/2026

“Every hour you spend confused is an hour spend building the infrastructure inside your own head that will eventually let you do original work,”… [by using AI tools]… “you haven’t saved time. You’ve forfeited the experience that the time was supposed to give you.” @minaskar.bsky.social

science.org

Amid a flood of AI advances, astrophysicists are questioning the soul of their field

Researchers see enormous power in new tools—but also the potential end of astrophysics as a human endeavor

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Jonathan Jacobs @bioinformer.bsky.social · 05/06/2026

This is a thought provoking metaphysical piece that pulls at the strings of why we care so much (or don’t) as to whether AI can be better at everything than we can be. Absolutely love this. Thanks @aaas.org @science.org 🥰

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Reposted by Jonathan Jacobs

Jonathan Jacobs @bioinformer.bsky.social · 21/06/2025

#ASMicrobe Gold. These are all great people.

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Reposted by Jonathan Jacobs

Scott V. Nguyen @scottnguyen.bsky.social · 05/06/2026

What if waste could become a resource? Join Dr. Ryan Bing as he explores how engineered microbes can transform waste feedstocks into valuable compounds. Looking forward to moderating this session! #ASMMicrobe @bioinformer.bsky.social

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Reposted by Jonathan Jacobs

Stephen Turner @stephenturner.us · 05/06/2026

Biodefense in the Intelligence Age: openai.com/index/biodef... PDF: cdn.openai.com/pdf/biodefen...

openai.com

Biodefense in the Intelligence Age

An action plan for AI-powered biological resilience

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Reposted by Jonathan Jacobs

Stephen Turner @stephenturner.us · 05/06/2026

Developing a standard definition for sequences of concern: www.frontiersin.org/journals/bio...

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Jonathan Jacobs @bioinformer.bsky.social · 05/06/2026

#ASMicrobe rumors: attendees climbed out the window of a rooftop bar to retrieve someone’s backpack that had fallen out the window onto a lower rooftop. @tallcuppajoe.bsky.social ?

static.klipy.com

Nick Fury: I Will Neither Confirm Nor Deny

ALT: Nick Fury: I Will Neither Confirm Nor Deny

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Reposted by Jonathan Jacobs

Dr Jamie Gallagher @jamiebgall.co.uk · 02/06/2026

It’s Pride 🏳️‍🌈 Spare one repost for a small creator? 🥺 My science and sci fi pins raise money for homeless LGBTQ+ people. Just sent another £800 to @aktcharity.bsky.social bringing total to £47,521 New for Pride 2026: 🌈Scientist🌈 🏳️‍🌈🐥🦜🦅🏳️‍🌈 🌈pronouns🌈 www.jamiebgall.co.uk/shop

Two bird pins. A series if birds sitting on a branch. Each bird is the colour of a stripe on the rainbow flag.

Pronoun pins with rainbow motif:
She her
He him
She they
He they
They them

An array of pride themed science and sci fi pins.

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Reposted by Jonathan Jacobs

Stephen Turner @stephenturner.us · 02/06/2026

Once upon a time I was falling in love, but now I'm only falling apart 🎵 The total eclipse of bioinformatics: From disruption to convention, and a gentle warning journals.plos.org/ploscompbiol...

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Jonathan Jacobs @bioinformer.bsky.social · 29/05/2026

I finally forked up the money to buy an original hardback version of S. Ohno’s infamous 1970 “Evolution by Gene Duplication” it’s wonderful. And I was super surprised and happy to find it had a page torn out of its book review in Science from 1972. 🤩

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Reposted by Jonathan Jacobs

Binning Singletons @binningsingletons.com · 28/05/2026

It’s exciting to go to @asm.org #ASMicrobe but it can be intimidating if it’s your first time or you are alone (and even if you’re not!). We help you have a great meeting through our grassroots peer mentoring program. Join today! 🔬 🧪 🦠 #MicroSky #AMR binningsingletons.com/singleton/bi...

Distracted girlfriend meme. She’s wearing a name tag that says “Hello my name is Solo and 1st time attendees.” She’s checking out Binning Singletons while her guy, wearing a tag that says “Attending ASMicrobe without binsing”, is upset

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Reposted by Jonathan Jacobs

James McInerney @jomcinerney.bsky.social · 11/05/2026

Paper: doi.org/10.64898/202... Code: github.com/mol-evol/pan... Pushback and alternative readings very welcome.

doi.org

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Reposted by Jonathan Jacobs

Ida Bae Wells @nhannahjones.bsky.social · 29/04/2026

None of us take pleasure in being right: But we are in the Second Nadir. www.nytimes.com/2025/06/27/m...

nytimes.com

How Trump Upended 60 Years of Civil Rights in Two Months

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Reposted by Jonathan Jacobs

Jasmine 🌌🔭 @astrojaz.bsky.social · 27/04/2026

i feel like society moved on from these too quickly

$A solar eclipse, captured from a camera mounted on one of the Orion spacecraft\u2019s solar array wings during the Artemis II crew\u2019s flyby of the Moon\u2019s far side. The Moon is dark, save for a bright halo of white light surrounding it. The Orion spacecraft is in the leftmost half of the image, mostly shadowed.$ The Moon and crescent Earth from Artemis II

The Moon and crescent Earth from Artemis II

$A crescent Earth setting behind the Moon\u2019s horizon. Credit: NASA$

A full disk image of Earth, as seen from the Orion capsule. The planet is a pale blue, swirling with white clouds and glowing slightly lighter blue in place from reflected light. From about 8 to 9 o'clock, a large brown landmass is Africa, with the Iberian peninsula twinkling with lights just where the planet curves. At the 1 o'clock spot, aurora glow in a thin green glow, just barely separated from the planet's surface. Earth is set against the black of space. Credit: NASA/Reid Wiseman

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Reposted by Jonathan Jacobs

Kenneth Loi @kenjmloi.bsky.social · 27/04/2026

This work was co-led by myself and Peter Yoon. Structure was led by Peter, @terryzzy.bsky.social , and Trevor Docter. Many thanks to our intrepid collaborators and special thanks to Jennifer for supporting us through this project. www.biorxiv.org/content/10.6... www.biorxiv.org/content/10.6...

biorxiv.org

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Jonathan Jacobs @bioinformer.bsky.social · 27/04/2026

A “country of geniuses in a datacenter.” - @darioamodei.bsky.social (rereading this essay and it hits different even a few months later.. www.darioamodei.com/essay/the-ad... )

darioamodei.com

Dario Amodei — The Adolescence of Technology

Confronting and Overcoming the Risks of Powerful AI

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Jonathan Jacobs @bioinformer.bsky.social · 27/04/2026

internal discussion about the shoddy job most publications do in describing their bioinformatics methods... and one of my team members replied with this... LMAO.. (used with permission)... so true. 💀

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Jonathan Jacobs @bioinformer.bsky.social · 26/04/2026

Metadata as infrastructure Curation as design requirements not afterthoughts Reference materials as validation and benchmarking requirements This has to be the way moving forward

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Reposted by Jonathan Jacobs

Pat Schloss @patschloss.bsky.social · 26/04/2026

I never got to meet Woese, but Ford and Pace have been fantastic to me. Regardless of whether people agree with them, they are/were deep thinkers. No shade to anyone of my generation or the next, but I'm not sure who is similarly gifted.

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Jonathan Jacobs @bioinformer.bsky.social · 22/04/2026

About to submit a 10k word manuscript with ... zero figures. I'm pretty stoked about this body of work too. Several months of writing between everything else, but courtesy reviews by colleagues have been very positive despite my concerns about our attention span deficient era of social media.

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Jonathan Jacobs @bioinformer.bsky.social · 22/04/2026

Fun fact: “not a single person on the Wright Brothers team had a college education. They also had zero funding except their own money from their bicycle shop” They were OG hackers.

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Reposted by Jonathan Jacobs

Jo Rhodes @drjorhodes.com · 18/04/2026

Post the best photo you’ve ever taken of your pet

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Jonathan Jacobs @bioinformer.bsky.social · 18/04/2026

Post the best picture you have ever taken of of your pet

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Reposted by Jonathan Jacobs

Jonathan Jacobs @bioinformer.bsky.social · 13/04/2026

Scientific reproducibility, data provenance, metadata gaps are critical issues that are hampering AIxBIO advancements - especially in the ‘Omics space. If you missed my recent talk on this, plz check it out over @labroots.bsky.social www.labroots.com/webinar/repr... #genomics #bioinformatics

labroots.com

Reproducible Science in the Digital Age

Leveraging Authentic Data for Life Science Breakthroughs. Reproducibility is one of the most urgent challenges in life science research. Irreproducible results are often driven by unauthenti

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Jonathan Jacobs @bioinformer.bsky.social · 17/04/2026

I love this so much... and... it's things like this that make the voices in my head go "NERRRRDDDD!!!" 🤣 (for context - this is the W3C provenance model, PROV-DM. If you love this sort of thing... dive in! www.w3.org/TR/prov-dm/)

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Jonathan Jacobs @bioinformer.bsky.social · 16/04/2026

So i had a penchant for making 1 off limited run tshirts for “conference season”. It seems like each year things kind of get ratcheted up a notch too in terms of snark 🫣😂 So… question for the #microbiome #genomics #bioinformatics community… should I get these made? Would you want one?

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Reposted by Jonathan Jacobs

Elisabeth Bik @elisabethbik.bsky.social · 13/04/2026

I will be participating!

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Reposted by Jonathan Jacobs

Artologica aka Michele Banks @artologica.net · 13/04/2026

Here's another cool one for tree fans artologica.etsy.com/listing/4409... #sciart

Watercolor painting with blue and red dots arranged in a roughly circular pattern

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Reposted by Jonathan Jacobs

Artologica aka Michele Banks @artologica.net · 12/04/2026

Xylem Vessel, watercolor on cradled wood panel, ready to hang #sciart artologica.etsy.com/listing/4441...

Painting with blue and red blobs seen from the side

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