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Anthony M. Bonacolta

@ambonacolta.bsky.social
1.3K followers 1K following 285 posts

NSERC Postdoctoral Fellow in the Keeling Lab @ UBC studying marine protistan symbionts. Previously: del Campo Lab & Coral Reef Futures Lab 🐠🪸🌊🧬 He/Him 🏳️‍🌈 Website: abonacolta.github.io

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Reposted by Anthony M. Bonacolta
Mónica Medina @momedinamunoz.bsky.social · 05/10/2026
New lab publication shedding light into the role of microbial communities during sargasso blooms in the Caribbean 🧪🌊🦠🧬 www.frontiersin.org/journals/pla...
frontiersin.org
Frontiers | Microbial community dynamics mediate rapid biomass loss and phosphorus recycling in pelagic Sargassum
Sargassum blooms in the tropical North Atlantic have surged to unprecedented levels, causing massive algal tides that severely impact coastal ecosystems. To ...
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Florent Waltz @florentwaltz.bsky.social · 05/10/2026
Huge congratulations to all three Nobel Laureates, and especially Peter Hegemann! 👏 His seminal work on the green alga Chlamydomonas 🦠 laid the foundation for optogenetics. Thank you for putting Chlamy in the spotlight! ✨ Proof that groundbreaking discoveries don't always come from animal models! 🔬
Chlamydomonas cells
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Varsha Mathur @varshamathur.bsky.social · 05/10/2026
Let’s gooo protists!!! #protistsonsky
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Nobel Prize @nobelprize.org · 05/10/2026
Peter Hegemann and Georg Nagel – awarded the 2026 medicine prize – discovered a remarkable protein, channelrhodopsin, in a single-celled alga. Hegemann wondered how Chlamydomonas, a single-celled alga, is able to swim towards a light source.
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Kirsty Wan @micromotility.bsky.social · 05/10/2026
yes so happy for him!!! this is exactly why we do curiosity-driven science... #chlamydomonas #protistsonsky Funders and universities are you watching...???
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Anthony M. Bonacolta @ambonacolta.bsky.social · 04/10/2026
Cool work! #ProtistsOnSky Mitochondrial proteome of the apicomplexan Babesia divergens by Betsinger et al. www.sciencedirect.com/science/arti...
sciencedirect.com
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Reposted by Anthony M. Bonacolta
Anna Mankowski @oceanna.bsky.social · 02/10/2026
I am still a bit speechless but my main PhD project is finally out in Science Advances. It was a long process, but I am so happy with the final results! Massive thanks to everyone involved, especially my co-authors and everyone involved in sampling! www.science.org/doi/10.1126/...
science.org
Stability in flexibility: Shifting alliances stabilize the symbioses of marine animals over 150 million years
Many animals benefit from microbial symbionts that aid digestion, supply essential nutrients, or provide defense. When this dependence becomes obligate, as in gutless marine oligochaetes that have los...
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Reposted by Anthony M. Bonacolta
Julia Van Etten @couchmicroscopy.bsky.social · 29/09/2026
Spread the word! I’m looking to recruit a PhD student to grow the Paulinella project. Some details can be found here: www.vanettenlab.org/join
vanettenlab.org
Join! — Van Etten lab at UMD
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Reposted by Anthony M. Bonacolta
Julia Van Etten @couchmicroscopy.bsky.social · 26/09/2026
Protists deserve the spotlight and so do scientists! This was such an honor but mostly, this project reminded me why I have the best job and friends/colleagues in the world! 🔬
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Anthony M. Bonacolta @ambonacolta.bsky.social · 25/09/2026
Very cool! Came across unclassified Cladophorales a few times in my coral data 🪸 “Lithochloron, a new genus of green algae residing in coral skeleton (Cladophorales, Chlorophyta)” from Verbruggen et al #ProtistsOnSky
onlinelibrary.wiley.com
<fi>Lithochloron</fi>, a new genus of green algae residing in coral skeleton (Cladophorales, Chlorophyta)
Coral skeletons host diverse microbial communities, including endolithic green algae that contribute to holobiont functioning. The siphonous green alga Ostreobium (Bryopsidales) is arguably the best-....
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Reposted by Anthony M. Bonacolta
Anna Schrecengost @annaschreck.bsky.social · 24/09/2026
Check out eukCHARMer, the new tool coming out of the Beinart Lab @symbiosisrox.bsky.social @urigso.bsky.social !! github.com/aschrecengos... (1/5)
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Reposted by Anthony M. Bonacolta
Dacks Lab (Evolutionary Cell Biology) @dackslabecb.bsky.social · 24/09/2026
My Summer 2026 Editor in Chief Message for the Journal of Eukaryotic Microbiology is now available. It talks about exciting developments at JEM over the past year (higher IF, the Trager Award) and things that we will launch soon. I hope that you enjoy it:) onlinelibrary.wiley.com/doi/10.1111/...
onlinelibrary.wiley.com
Summer 2026 Editor‐In‐Chief Message
Click on the article title to read more.
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Reposted by Anthony M. Bonacolta
H. B. Beryl Rappaport @hbrappap.bsky.social · 22/09/2026
Our description of fire amoeba, 𝘐𝘯𝘤𝘦𝘯𝘥𝘪𝘢𝘮𝘰𝘦𝘣𝘢 𝘤𝘢𝘴𝘤𝘢𝘥𝘦𝘯𝘴𝘪𝘴, is now online at Cell! Thanks @oliverio.bsky.social and amazing team for questioning the limits of eukaryotes! 🔥 www.cell.com/cell/fulltex...
cell.com
A geothermal amoeba sets a new upper temperature limit for eukaryotes
The amoeba Incendiamoeba cascadensis demonstrates that eukaryotic life can withstand temperatures beyond what was thought possible and sheds light on molecular strategies for survival in extreme heat.
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Anthony M. Bonacolta @ambonacolta.bsky.social · 22/09/2026
Discovery of an Undocumented Symbiosis Between Arcellinida and a Flagellate Using Single-Cell Transcriptomics - Ani et al. (2026) Free link: onlinelibrary.wiley.com/share/QBTIVR... #ProtistsOnSky
onlinelibrary.wiley.com
Discovery of an Undocumented Symbiosis Between Arcellinida and a Flagellate Using Single‐Cell Transcriptomics
Symbiotic interactions involving single-celled eukaryotes have been studied for over a century. This is in part because these microbes occupy nearly all environments and have adapted to survive throu...
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Reposted by Anthony M. Bonacolta
Nicole Coots @nicolecoots.bsky.social · 18/09/2026
The International Society of Protistology is funding community initiatives like workshops and symposia! The deadline is soon (09/30) but the funding will also be available next year :-) Send to anyone that might benefit from this/plz retweet! #ProtistsonSky protistologists.org/call-for-app...
protistologists.org
Call for Applications: Community Initiative Support Fund - International Society of Protistologists
The International Society of Protistologists is an association of scientists devoted to research on single-celled eukaryotes, or protists. The ISOP promotes the presentation and discussion of new or i...
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Reposted by Anthony M. Bonacolta
Alejandro Manzano Marín @amanzanom.bsky.social · 18/09/2026
Please help spread the word! I'm searching for a #PhD student to join my group to work on #Symbiont - #pathogen interactions in #Hemiptera. Fully-funded, 4 years *Full details 👇🏼 besymblab.univie.ac.at/wp-content/u... 🧵 on the project 👇🏼 bsky.app/profile/aman... #ScienceJobs #SymbioSky #MicroSky
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Reposted by Anthony M. Bonacolta
ISEP @isepprotists.bsky.social · 17/09/2026
New #ISEPpapers! The colorless dictyochophyte Ciliophrys sp. Baltic has lost a plastid but hosts a bacterial endosymbiont www.nature.com/articles/s42... #Protists #Algae #Symbiosis #Bacteria #Microbes #Evolution
microscopic photos of microbial cells, upper row in normal light, lower in fluorescence
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Reposted by Anthony M. Bonacolta
Ed Yong is offline @edyong209.bsky.social · 17/09/2026
This is the first book I’ve written that encompasses the entirety of the living world. It features animals, yes, including fireflies, bar-tailed godwits, ocean skaters, and hagfish. But its protagonists also include plants, fungi, protists, bacteria, and more. It's all here. 5/
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Brad Weiler @bradweilerdives.bsky.social · 17/09/2026
New paper! 🦠🪸 We detected carnivorous sponge-associated iridovirus (CaSpA-IV) in the deep-sea coral Paragorgia arborea—expanding its known occurrence from sponges into Cnidaria. These are from the same samples from my masters—Happy Reading! link.springer.com/article/10.1...
link.springer.com
Research on the ecology of the carnivorous sponge-associated iridovirus (CaSpA-IV) reveals its presence in the Cnidaria - Discover Viruses
Carnivorous sponge–associated iridovirus (CaSpA-IV) is a recently described virus identified in two deep-sea cladorhizid sponge species from the Gulf of Maine and Baffin Bay. To assess its ecological ...
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Anthony M. Bonacolta @ambonacolta.bsky.social · 16/09/2026
Single-cell-resolved genome atlas of prokaryoplankton inhabiting the ocean’s interior from Chang et al. - www.cell.com/cell/fulltex...
cell.com
Single-cell-resolved genome atlas of prokaryoplankton inhabiting the ocean’s interior
GORG-Dark presents genomes of 9,698 individual bacterial and archaeal cells from the ocean’s sunless interior. The atlas resolves depth stratification to abyssal waters, uncovers particle-attached Pel...
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Reposted by Anthony M. Bonacolta
Nature @nature.com · 31/08/2026
Nature research paper: Synergistic degradation of fucoidans in the ocean go.nature.com/3UGv1hr
go.nature.com
Synergistic degradation of fucoidans in the ocean - Nature
Efficient degradation of fucoidans depends on complementary bacterial guilds that cooperatively break backbone and side-chain sugars, revealing a conserved, globally relevant mechanism that shapes marine carbon cycling.
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Reposted by Anthony M. Bonacolta
Asher Leeks @asherleeks.bsky.social · 16/09/2026
Come work with @viromehunter.bsky.social and myself at UBC! We have a postdoctoral position available for someone with an interest in bioinformatics and genomics, using sociovirology to understand disease dynamics in plant viruses. Advert: ppvlab.sites.olt.ubc.ca/files/2026/0...
ppvlab.sites.olt.ubc.ca
Browser Verification | UBC Cybersecurity
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Reposted by Anthony M. Bonacolta
Earlham Institute @earlhaminst.bsky.social · 15/09/2026
🆕 Joining a new international project, applications are open for a computational postdoc researcher to work on #protist #genomics. This bioinformatics role focuses on developing and applying novel methods for long-read and #singlecell across a diverse range of protist species.
okt.to
Postdoctoral Research Scientist (Bioinformatics) - Protist Genomics
The Earlham Institute has been awarded funding by the Gordon and Betty Moore Foundation to develop Protist Omics at Scale, a three-year international methods-development programme run in partnership with the Scottish Association for Marine Science, home of the Culture Collection of Algae and Protozoa, and Aalborg University.
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Anthony M. Bonacolta @ambonacolta.bsky.social · 08/09/2026
Got lucky with this one! 🐋
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Reposted by Anthony M. Bonacolta
Julia Van Etten @couchmicroscopy.bsky.social · 04/09/2026
Our paper describing two new photosynthetic Paulinella species is out today in JPhycol! This is the kind of work I love to do and even it though took many years to finish, we had a lot of fun stomping around together in the marsh! onlinelibrary.wiley.com/doi/10.1111/... #protistsonsky
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Colin Kremer @quant-ecology.bsky.social · 03/09/2026
“Cool” new NSF postdoc position available in my lab at UConn, studying our unique Arctic phytoplankton collection and the interactive effects of temperature, light, and photoperiod. 3 years of funding, detailed job ad here: s.uconn.edu/q1o0itl62l.
Picture of centric Arctic diatom
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Anthony M. Bonacolta @ambonacolta.bsky.social · 02/09/2026
Thanks for all your help with this project Emily!!
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Reposted by Anthony M. Bonacolta
Javier del Campo @fonamental.bsky.social · 01/09/2026
The #holobiont is the unit of coral health: host, symbionts, bacteria, and protists, all interconnected. This was the final chapter of Anthony's PhD, and I could not be prouder 🙌. Open access: doi.org/10.1186/s401...
doi.org
Client Challenge
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Reposted by Anthony M. Bonacolta
Javier del Campo @fonamental.bsky.social · 01/09/2026
Coral bleaching looks like a reef-scale catastrophe. But it starts as a breakdown between single cells. Published in @microbiomej.bsky.social, led by @ambonacolta.bsky.social we watched it at that scale for the first time: the first single-cell transcriptomics of a bleaching coral 🪸 #CoralReefs
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Anthony M. Bonacolta @ambonacolta.bsky.social · 01/09/2026
Thanks Javi! Couldn’t have tackled this without your mentorship and support!
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Monir Moniruzzaman @giantvirus.bsky.social · 31/08/2026
New research from our lab revealing pervasive genomic islands (GIs) in giant viruses (GV). Leveraging long-read assembled GV genomes we reveal these GIs, their functional repertiore and roles in GV genome variation. Research led by PhD candidate Benjamin Minch! www.nature.com/articles/s41...
nature.com
Widespread genomic islands are hotspots of genome variations and mosaicism in giant viruses - Nature Communications
Researchers analyzed 369 giant virus genomes and identified widespread genomic islands, regions of rapid gene turnover that help these viruses adapt to hosts and even exchange genes with bacteria, rev...
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Anthony M. Bonacolta @ambonacolta.bsky.social · 31/08/2026
🔬 Cnidarian FACS experts - Grace & Nikki (@cnids-rock.bsky.social) 🪸 Coral husbandry wizards - Rich, Emily (@emilyyeager9.bsky.social), Alexandra, & Carly 💻 THE computer guy - Jordi (@jnonell.bsky.social) 🌟 Unrivaled mentorship- Andrew (@coralprof.bsky.social)and Javi (@fonamental.bsky.social)!
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Anthony M. Bonacolta @ambonacolta.bsky.social · 31/08/2026
This work would not have been possible without the amazing help of all co-authors at @miamirosenstiel.bsky.social & @ibe-barcelona.bsky.social including:
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Anthony M. Bonacolta @ambonacolta.bsky.social · 31/08/2026
Thank you to the reviewers who have greatly improved this publication since the initial pre-print 2 years ago. I’ve learned a lot over the course of this project and have definitely grown as a scientist thanks to it 🙏
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Anthony M. Bonacolta @ambonacolta.bsky.social · 31/08/2026
We created a web app to allow others to explore both the microbiome and scRNAseq data themselves for microbes or genes of interest! Access it here: github.com/delCampoLab/...
github.com
GitHub - delCampoLab/ofav_bleaching_sce: Code related to Bonacolta et al. Single Cell Ecology of Orbicella faveolata through bleaching
Code related to Bonacolta et al. Single Cell Ecology of Orbicella faveolata through bleaching - delCampoLab/ofav_bleaching_sce
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Anthony M. Bonacolta @ambonacolta.bsky.social · 31/08/2026
We also analyzed the bacteria and protists associated with coral bleaching. Early heat stress was marked by declining nitrifiers alongside increases in denitrifiers and nitrate reducers. We also observe a bloom of protists such as chlorophytes, diatoms, and labyrinthulids #ProtistsOnSky #MicroSky
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Anthony M. Bonacolta @ambonacolta.bsky.social · 31/08/2026
We report coral cell type-specific expression, notably between gastrodermal cells hosting either algal symbiont (Durusdinium or Breviolum), where we see apparent symbiont-specific suppression of host heat-stress genes 🪸🔥 #SymbioSky
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Anthony M. Bonacolta @ambonacolta.bsky.social · 31/08/2026
My final PhD chapter is now published in Microbiome (@microbiomej.bsky.social)! Using metabarcoding, photochemical measurements, and the first scRNAseq of a bleaching coral, we examined the microbial ecology of coral bleaching at the single-cell level! 🪸🔥 #CoralReefs 🔗 rdcu.be/zWHQ92WqZQUa
link.springer.com
Single-cell ecology of coral-algal symbiosis breakdown - Microbiome
Background The symbiosis between corals and dinoflagellate algae is disrupted by heat stress, leading to bleaching and subsequent coral mortality, devastating reef habitats. Despite its planetary-scal...
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Anthony M. Bonacolta @ambonacolta.bsky.social · 27/08/2026
"The meta-holobiont: rethinking marine species interactions through microbial connectivity" from Manea et al in Trends in Microbiology www.cell.com/trends/micro...
cell.com
The meta-holobiont: rethinking marine species interactions through microbial connectivity
Positive species interactions underpin ecological resilience, which is critical for counteracting anthropogenic pressures on ecosystems. Current research focuses on intra-holobiont interactions betwee...
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Reposted by Anthony M. Bonacolta
Corey Holt @coreyholt.bsky.social · 27/08/2026
What's that? You wish we had more data on those bizarre dinoflagellates WITH EYES? Have no fear! With @protistwtmostest.bsky.social, Gordon Lax, and @pjkeelinglab.bsky.social, who also have eyes.
academic.oup.com
Evolution of complex organelles in ocelloid-bearing dinoflagellates
Abstract. Warnowiid dinoflagellates are known for possessing two of the most complex structures known in single cells: multi-projectile nematocysts and the
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Reposted by Anthony M. Bonacolta
bioRxiv Ecology @biorxiv-ecology.bsky.social · 21/08/2026
Experimental Thermal Stress Increases Corallicolid Relative Abundance in the Stony Coral Pocillopora damicornis www.biorxiv.org/content/10.64898/20…
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Anthony M. Bonacolta @ambonacolta.bsky.social · 21/08/2026
Cryptic Interactions in a Marine Microcosm: Sponges Shape the Microbiome of a Resident Goby - Bunholi et al 2026- Molecular Ecology onlinelibrary.wiley.com/doi/10.1111/...
onlinelibrary.wiley.com
Cryptic Interactions in a Marine Microcosm: Sponges Shape the Microbiome of a Resident Goby
Microbial symbionts influence ecological and evolutionary processes in their multicellular hosts; yet they remain poorly characterised in marine systems. Sponges host exceptionally diverse microbiome...
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Dewi Langlet @dewilanglet.bsky.social · 21/08/2026
I'm happy to share two new #symbiosis papers freshly out of the press: - Symbiont shuffling in foraminiferal holobiont doi.org/10.1093/isme... #foramfriday - Ciliates symbionts in #deepsea shrimps doi.org/10.1111/jeu....
doi.org
Thermal responses and Symbiodiniaceae shuffling in a Red Sea foraminifer holobiont
Abstract. Symbiont-bearing benthic foraminifera, like corals, rely on endosymbionts for growth and nutrition and experience bleaching under heat stress. So
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Anthony M. Bonacolta @ambonacolta.bsky.social · 21/08/2026
Kinda incredible how much higher the standards are for a scientist compared to say… the President lol
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Anthony M. Bonacolta @ambonacolta.bsky.social · 20/08/2026
Symbiotic capacity in a changing ocean: emerging questions around phytoplankton interactions- Zwahlen & Vincent 2026 - Trends in Ecology & Evolution www.cell.com/trends/ecolo...
cell.com
Symbiotic capacity in a changing ocean: emerging questions around phytoplankton interactions
Phytoplankton fix half of global CO2 annually and drive key global nutrient cycles. They depend on interactions with bacteria, viruses, and protists. Yet our understanding of these interactions remain...
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Anthony M. Bonacolta @ambonacolta.bsky.social · 19/08/2026
Widespread Association of Ciliates Colonizing Gills of Shrimps Inhabiting Vents and Seeps Across the Pacific Ocean - Hey et al - 2026 - Journal of Eukaryotic Microbiology - Wiley Online Library onlinelibrary.wiley.com/doi/10.1111/... #ProtistsOnSky
onlinelibrary.wiley.com
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Anthony M. Bonacolta @ambonacolta.bsky.social · 14/08/2026
Labyrinthula merlionensis sp. nov.: A Novel Labyrinthulid Infecting Marine Diatoms - Sim - 2026 - Journal of Eukaryotic Microbiology - Wiley Online Library onlinelibrary.wiley.com/doi/10.1111/... #ProtistsOnSky
onlinelibrary.wiley.com
<fi>Labyrinthula merlionensis</fi> sp. nov.: A Novel Labyrinthulid Infecting Marine Diatoms
Labyrinthulomycetes are a class of fungus-like heterotrophic protists from the Stramenopiles lineage, recognized for their ecological role as decomposers and contributors to nutrient cycling. They co...
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ISEP @isepprotists.bsky.social · 14/08/2026
New #ISEPpapers! An endogenous energy-metabolizing organelle www.cell.com/current-biol... #Protists #Microbes #Organelles #Evolution
a schematic picture summarizing an evolutionary scenario about the origin of the organelles discussed in the paper
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Anthony M. Bonacolta @ambonacolta.bsky.social · 12/08/2026
Thank you!
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Tristan @tristamoeba.bsky.social · 12/08/2026
Checkout 𝘚𝘢𝘱𝘱𝘪𝘯𝘪𝘢 𝘭𝘶𝘬𝘰𝘭𝘪, a new species of amoeba isolated from cow poop that aggregates on the tips of dung fibers doi.org/10.64898/202... #ProtistsOnSky
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