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Ragothaman Yennamalli

@structbioinfo.bsky.social
889 followers 455 following 441 posts

Associate Professor JNU | Computational Biologist | YIM2024 organizer | Editor: CSBJ, BMC Bioinfo | Spl issue Ed: Biophys J | He/Him.

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Ragothaman Yennamalli @structbioinfo.bsky.social · 08/09/2026
Unfortunately, the talk has been rescheduled for another time in the future.
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Ragothaman Yennamalli @structbioinfo.bsky.social · 07/09/2026
Excited to host Prof. Ruchi Anand, Head of the Department of Chemistry, IIT Bombay at Jawaharlal Nehru University (JNU) on 11th September 2026!!! She is the current president of Indian Biophysical Society. Drop by to listen to another excellent talk at SC&IS. www.jnu.ac.in/node/159898358
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Ragothaman Yennamalli @structbioinfo.bsky.social · 17/08/2026
There is a change in the time! It is at 2PM, not 3PM.
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Ragothaman Yennamalli @structbioinfo.bsky.social · 14/08/2026
Super excited to host and listen to my undergrad bestie and now an author @sudhakaran.bsky.social on Dark Genome at JNU. Date: 19th August 2026 Time: 3PM Drop by and listen to an excellent speaker!
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Ragothaman Yennamalli @structbioinfo.bsky.social · 12/08/2026
Happy to share our work featured in Nature India: www.nature.com/articles/d44... A colab with ICAR-NDRI, where we ensured that our conclusions are supported by the evidence than breed-specific differences. Ms.Menaka Thambiraja, the PhD student and min author, will defend her thesis on 14 Aug.
nature.com
Genetic evidence confirms native cattle are healthier than crossbred animals
Indigenous varieties fend off diseases better, research says, suggesting breeders must select for immunity, not just milk.
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Ragothaman Yennamalli @structbioinfo.bsky.social · 11/08/2026
Super excited to host @venkramaswamy.bsky.social from BITS Pilani, Hyderabad Campus at SCIS, JNU on 17th August 2026 at 11AM. His talk is titled "Unlocking the inner potential of trained, but underperforming Deep Networks via the geometry of their internal representations".
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D. Paul Angel @dpaulangel.com · 03/08/2026
LMFAO
A chart of common slang for Gen Alpha, Gen Z, Millenials, and Boomers, with the Gen-X column represented by Dude. Duuude, Dude! and Fuck
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Dr. Stephanie @punkrockscience.bsky.social · 22/07/2026
I just saw a meme that said “get in losers, we’re reclaiming the emdash”. People. PEOPLE. Where are your STANDARDS? It CLEARLY should be “get in, losers — we’re reclaiming the em dash.”
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Ragothaman Yennamalli @structbioinfo.bsky.social · 15/07/2026
On the third day of #ISMB2026, it was inspiring to hear Prof. Partha Majumder's talk on Indian population genomics work. That he ended with Maya Angelou's quote on diversity was apt. Also, two posters from our lab for 3DSIG are up! New work with Shruthi @ncbsbangalore.bsky.social !!!
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Ragothaman Yennamalli @structbioinfo.bsky.social · 14/07/2026
Today is a big day at #ISMB2026 @iscb.bsky.social for the Yennamalli lab!!! 1. Kishore and Vennila's poster is up on the poster boards! 2. The publication session on "Benchmarking machine learning publications" with five excellent speakers lined up! See y'all in Room 9-10 Combo... Stay tuned!
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Ragothaman Yennamalli @structbioinfo.bsky.social · 06/07/2026
And the Virtual Tutorial #ISMB2026 has started!!!! @iscb.bsky.social
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Ian Dunt @iandunt.bsky.social · 05/07/2026
That @naomialderman.bsky.social is so fucking brilliant. If you've found yourself falling out the reading habit, she has created a kind of Couch-to-5K of reading open.substack.com/pub/naomiald...
open.substack.com
let's do a 'couch to 5k' for reading
we're going to work ourselves back to good 'reading fitness' over the next eight weeks. come and join us.
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Ragothaman Yennamalli @structbioinfo.bsky.social · 02/07/2026
We are closer to #ISMB2026 happening in 🇺🇸 !!! There are three things to look forward to! @iscb.bsky.social 1. Yennamalli Lab will be presenting our latest work! 2. Our virtual tutorial is on the 6th and 7th! 3. Chairing the publications session!!! Stop by at our posters and session!!!!
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Ragothaman Yennamalli @structbioinfo.bsky.social · 01/07/2026
Excited to host Dr. Dhiraj Bhatia from Department of Biological Sciences and Engineering at IIT Gandhinagar, on 23rd July at the School of Computational and Integrative Sciences at Jawaharlal Nehru University!!!🎉🎉🎉 Really excited to hear the science from his lab!🥰
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Itai Yanai @itaiyanai.bsky.social · 22/06/2026
The pattern in science is that you get stuck in every project. But the reason is not that you're dumb but because you're confronting the unknown. And not giving up does eventually lead to a discovery! Thank you El País for interviewing me about my day science and my night science!
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Ragothaman Yennamalli @structbioinfo.bsky.social · 30/04/2026
They say if you spot a Nilgai, you cannot escape this campus... I succumbed as well, to the beauty of nature here. So, I am starting my new chapter at my PhD alma mater Jawaharlal Nehru University with a new designation (Assoc. Prof.) and new expectations! Wish me luck! #tenured
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Harmit Singh Malik @harmitmalik.bsky.social · 21/04/2026
Don't celebrate too early. Wait for the NOA (notice of award) bbc.com/news/videos/...
bbc.com
Victory slips away as marathon runner celebrates too soon
The dramatic end to the Delaware Marathon occurred when the lead runner slowed in celebration before a trailing marathoner sprinted toward the finish line .
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Ragothaman Yennamalli @structbioinfo.bsky.social · 17/03/2026
🎉🎉🎉 After nearly 16 months of being in peer-review and three rounds of revision, this preprint finally got published!!!🎉🎉🎉 www.nature.com/articles/s41... We have proposed a replicable method for comparative genomics in this paper. PS: This is Suneel's 107th paper, and my 71st!!!
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Ragothaman Yennamalli @structbioinfo.bsky.social · 13/03/2026
If you are not following @inprep.bsky.social you are missing out good science satire. LOL!!! Made my day! H/T @lianafaye.bsky.social
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Ragothaman Yennamalli @structbioinfo.bsky.social · 10/03/2026
This is such a beautiful anecdote about Phil. I had the honor of meeting him only once. It was a beautiful encounter and his enthusiasm to encourage ECRs like me, was infectious. His passing was shocking to me. Irreparable void created in Bioinformatics community. RIP Phil!
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Ragothaman Yennamalli @structbioinfo.bsky.social · 05/03/2026
Wow!!!! This is HUGE!!!
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Ragothaman Yennamalli @structbioinfo.bsky.social · 05/03/2026
🚨🚨🚨Happy to share that our Tutorial proposals got accepted for #ISMB2026 and #ECCB2026!!! Flagship events of @iscb.bsky.social 🎉🎉🎉 Looking forward working with Farzana, Shashank, Meg, and JC. eccb2026.org/tutorials-wo... www.iscb.org/ismb2026/wha...
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Ragothaman Yennamalli @structbioinfo.bsky.social · 24/02/2026
Today, I am excited to listen to Best of Biophysical Journal symposium!
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Ragothaman Yennamalli @structbioinfo.bsky.social · 24/02/2026
Met Prof. Bob Jernigan, after 15 years! Also met our bioinformatics alumni Jaya Vasavi. Yesterday's posters were super good! Had a good time. Also, it was nice reconnecting with Harpreet Singh from THE Ohio State Univ. We met first in 2012.
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Ragothaman Yennamalli @structbioinfo.bsky.social · 23/02/2026
The day ended with conference swag collection and topped with collecting the certificate for curating the special issue of @biophysj.bsky.social @biophysicalsoc.bsky.social from EiC @frettinglab.bsky.social and John Long! This was a surprise...💗💕 Super proud of how the issue turned out!
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Ragothaman Yennamalli @structbioinfo.bsky.social · 23/02/2026
Today was a great day with a dedicated session on science communication with Jeremy Berg, Holden Thorpe, and Daniel Cohen talking about why scicomm is a must in today's time. Also, my favorite Darwin quote. Met a few friends and other ambassadors as well!!!
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Ragothaman Yennamalli @structbioinfo.bsky.social · 22/02/2026
An amazing set of talks in the theory and computation subgroup. Met a couple of friends. And ended with dinner with my postdoc supervisor with lots of things catching up over delicious turkish food!!!
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Ragothaman Yennamalli @structbioinfo.bsky.social · 22/02/2026
Today we start the Biophysical society meeting!!! And I met my PhD co-supervisor Bostjan Kobe from The University of Queensland, Australia after 20 years!!!! Exciting day ahead...
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Jason Moore @moorejh.bsky.social · 12/02/2026
vibe coding != blind coding #vibecoding
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Ragothaman Yennamalli @structbioinfo.bsky.social · 09/02/2026
At the fringes of the BlueSky user galaxy, but in good company!
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Chrystal Starbird @drstarbird.bsky.social · 05/02/2026
I am SO incredibly excited to announce the launch of a global list of Inspiring Black Scientists. You can use this list to nominate and connect with researchers. Please share and join us in highlighting these outstanding scientists for #BlackHistoryMonth and beyond! www.wiley.com/en-us/resear...
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Ragothaman Yennamalli @structbioinfo.bsky.social · 23/01/2026
Fantastic way to start the year 🎉 with a preprint from Yennamalli Lab! This is a ICAR-NASF funded project in collaboration with NDRI, Karnal! What makes indicine cattle naturally resilient to infections and harsh environments? A 🧵👇🧬 1/8
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Stephen Turner @stephenturner.us · 20/01/2026
Prime numbers 2-4999, animated with ggplot2+gganimate. #Rstats code: gist.github.com/stephenturne...
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Ragothaman Yennamalli @structbioinfo.bsky.social · 12/01/2026
I would love to be a student in this course!
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Ragothaman Yennamalli @structbioinfo.bsky.social · 09/01/2026
@vikasnavaratna.bsky.social This is right up your alley! farzanashaju.github.io/how-does-ind... Haven't read it fully, yet! Sounds interesting...
farzanashaju.github.io
How Does India Cook Biryani?
A large-scale dataset and VLM-based pipeline for analyzing procedural differences across 12 regional Indian biryani variants using 120 cooking videos.
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Ragothaman Yennamalli @structbioinfo.bsky.social · 08/01/2026
Way to start the year with a huge humblebrag! 🎉🎉🎉 I have been selected as the Indian Ambassador for @biophysicalsoc.bsky.social seventh cohort (2026-2028)!!! Eagerly looking forward to working with other ambassadors to promote biophysics and bioinfo in India. 🥳 🙌 biophysics.cld.bz/Biophysical-...
Seventh cohort of BPS ambassadors in Biophysical Society January 2026 bulletin
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European Conference on Computational Biology @eccb-europe.bsky.social · 05/01/2026
📣 Still 11 days to submit proposals for workshops and tutorials for #ECCB2026! Don't miss the opportunity to be an active part of one of Europe's leading conference in #Bioinformatics and #ComputationalBiology. Deadline: 16 January 2026 🔗 eccb2026.org/call-tutoria...
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Shruthi Viswanath @shruthilab.bsky.social · 02/01/2026
Excited to share our book chapter on method development advances in integrative structural modeling in Springer Handbooks now online! @shreyasarvindekar.bsky.social @kartikmajila.bsky.social doi.org/10.1007/978-...
doi.org
Recent Methods from Statistical Inference for Integrative Structural Modeling
Integrative modeling of macromolecular assemblies allows for structural characterization of large assemblies that are recalcitrant to direct experimental observation. A Bayesian inference approach fac...
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Ragothaman Yennamalli @structbioinfo.bsky.social · 31/12/2025
This year on Bluesky I wrote 121 posts and 159 replies. I received 303 likes, whereas 27 was from my most popular post, and apparently I love saying "not" and 🚨! www.madebyolof.com/bluesky-wrap...
madebyolof.com
structbioinfo.bsky.social's Bluesky Wrapped 2025
Check out structbioinfo.bsky.social's year on Bluesky!
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Ragothaman Yennamalli @structbioinfo.bsky.social · 31/12/2025
Finally, the special issue is out! Read the editorial here: www.cell.com/biophysj/ful... @florencetama.bsky.social @frettinglab.bsky.social @biophysicalsoc.bsky.social @biophysj.bsky.social
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Ragothaman Yennamalli @structbioinfo.bsky.social · 29/12/2025
End-of-year preprint drop from Yennamalli Lab 🎯 Genome-scale metabolic models tell us what flows. Protein structures tell us how. We asked: what happens if you combine each other? 👉 Structural systems biology. Funding: Sastra Univ & ANRF-India 1/7
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bioRxivpreprint @biorxivpreprint.bsky.social · 16/12/2025
Organelles harbour pH gradients www.biorxiv.org/content/10.64898/20…
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Ragothaman Yennamalli @structbioinfo.bsky.social · 17/12/2025
This changes everything about what I was taught about pH in organelles like lysosomes. This also changes the way pH dependent fusion mechanisms were understood for some viral proteins.
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Tiffany Lowe-Power stands with Minnesota @tlowepower.bsky.social · 11/12/2025
Please repost: Undergraduates (globally) can receive free membership in the professional scientific society for plant pathogens, the American Phytopathological Society (APS). This society provides excellent professional development. www.apsnet.org/members/comm...
apsnet.org
Borlaug’s Army: an undergraduate membership initiative of the American Phytopathology
Borlaug’s Army: an undergraduate membership initiative of APS....Welcome to Borlaug’s Army —a recruitment, engagement, and outreach initiative of the American Phytopathological Society.  Free membersh...
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Oded Rechavi @odedrechavi.bsky.social · 01/12/2025
Every full professor:
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Ragothaman Yennamalli @structbioinfo.bsky.social · 25/11/2025
Wonderful read with my morning coffee. It was an absolute delight to read a fine piece of writing. It reaffirms the practice that scientific writing is not in linear time scale. It is in the presentation, where details are lost, and this leads to utter confusion in reproducibility. History Matters!!
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Adam Serwer @adamserwer.bsky.social · 17/11/2025
Editors have a really hard job, and the good ones can make something unreadable readable, and the great ones can make something unreadable into something good. But they're basically invisible, until someone tries to write without one.
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fly & the salami stone. @flysalami.eurosky.social · 10/11/2025
Tout va bien, c'est humoristique
nme.com
31 illegible black metal band logos
It’s one of the strange quirks of the extreme metal scene: band names have to be written in an ornate, impossible-to-decipher font. Here are few of our favourites. Check the caption on each one to fin...
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Sanat Tarihi @sanatintarihi.bsky.social · 07/11/2025
Nicolas-Sébastien Adam - Prometheus Bound 1762 - Marble (Louvre)
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Ragothaman Yennamalli @structbioinfo.bsky.social · 05/11/2025
Send us your proposals!
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