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Shruthi Viswanath

@shruthilab.bsky.social
74 followers 75 following 6 posts

Computational Structural Biology, NCBS, TIFR, Bangalore Lab: isblab.ncbs.res.in

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Shruthi Viswanath @shruthilab.bsky.social · 18/04/2026
Introducing AF-Pipeline, open-source Python package for extracting confident structures, interfaces from AlphaFold predictions isblab.github.io/af_pipeline/... GitHub: github.com/isblab/af_pi.... By @omkargolatkar.bsky.social, initial idea @kartikmajila.bsky.social, test help @muskaanjl.bsky.social.
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Reposted by Shruthi Viswanath
National Centre for Biological Sciences, Bengaluru @ncbsbangalore.bsky.social · 01/04/2026
#CallForApplications We will soon be accepting applications for the interdisciplinary Physics of Life graduate program at NCBS/ICTS. Eligibility: Students from Mathematics, Physics, Chemistry, and Engineering from GATE, JAM, JEST streams for 2026 🌐: pol.ncbs.res.in
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Shruthi Viswanath @shruthilab.bsky.social · 11/03/2026
Excited to share our new COSB article on Integrative Modeling with AlphaFold authors.elsevier.com/a/1ml64,LqAr... by @KartikMajila @Omkar_Golatkar_ . Thanks to @NCBS_Bangalore for funding!
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Shruthi Viswanath @shruthilab.bsky.social · 04/03/2026
“Model Building, Refinement & Validation of Cryo-EM Data” workshop coming up soon! Organized jointly by NCBS-CCPEM-IISc
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Shruthi Viswanath @shruthilab.bsky.social · 02/01/2026
Excited to share our book chapter on method development advances in integrative structural modeling in Springer Handbooks now online! @shreyasarvindekar.bsky.social @kartikmajila.bsky.social doi.org/10.1007/978-...
doi.org
Recent Methods from Statistical Inference for Integrative Structural Modeling
Integrative modeling of macromolecular assemblies allows for structural characterization of large assemblies that are recalcitrant to direct experimental observation. A Bayesian inference approach fac...
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Reposted by Shruthi Viswanath
National Centre for Biological Sciences, Bengaluru @ncbsbangalore.bsky.social · 01/05/2025
📣#LatestPublicationAlert @shruthilab.bsky.social and team developed a new discrete geometry-based method, wall-EASAL, for integrative rigid docking of protein pairs. Congratulations to the team🎉 @muskaanjl.bsky.social @pubs.acs.org @tifr.res.in pubs.acs.org/doi/10.1021/... #computationalbiology
pubs.acs.org
A New Discrete-Geometry Approach for Integrative Docking of Proteins Using Chemical Cross-Links
The structures of protein complexes allow us to understand and modulate the biological functions of the proteins. Integrative docking is a computational method to obtain the structures of a protein co...
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Shruthi Viswanath @shruthilab.bsky.social · 23/01/2025
Excited to share our lab's perspective on frontiers in integrative structural modeling out in QRB Discovery this week! By @kartikmajila.bsky.social and @shreyasarvindekar.bsky.social www.cambridge.org/core/journal...
cambridge.org
Frontiers in integrative structural modeling of macromolecular assemblies | QRB Discovery | Cambridge Core
Frontiers in integrative structural modeling of macromolecular assemblies - Volume 6
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Reposted by Shruthi Viswanath
Arne Elofsson @handle.invalid · 27/12/2024
Please forward to good candidates jobportal.ku.dk/videnskabeli...
jobportal.ku.dk
Two PhD or Postdoc positions in computational off-target analysis of siRNA and small peptides
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Shruthi Viswanath @shruthilab.bsky.social · 22/12/2024
We are excited to share our preprint on identifying binding sites for IDRs from sequence. Do check out our method, Disobind (github.com/isblab/disobind). @kartikmajila.bsky.social's PhD work! www.biorxiv.org/content/10.1...
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Reposted by Shruthi Viswanath
Max Bonomi @bonomimax.bsky.social · 06/12/2024
Do you want to work at the interface of molecular simulations, structural biology experiments and #AI? Come to Paris for a PhD at @pasteur.fr 1 PhD position is available in our lab funded by ERC_Research. Please repost!! #compchem #compbio Info 👇 research.pasteur.fr/b/15Hr
research.pasteur.fr
One PhD thesis in integrative structural biology | Research - Institut Pasteur
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