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Sounak Sahu

@sounaksahu.bsky.social
440 followers 664 following 14 posts

Assistant Professor @NYU Langone Health #WeAreHiring #NewPI www.sahulab.com

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Reposted by Sounak Sahu
Shicheng Guo @shihcheng.bsky.social · 27/06/2026
Genetic testing advances have uncovered numerous variants of uncertain significance (VUS) in autoinflammatory diseases, complicating diagnoses and treatment decisions. As VUS quantity rises, the… PMID:42191839, Nat Rev Rheumatol 2026, @NatRevRheumatol doi.org/10.1038/s41584-026-01380-8
doi.org
Decoding variants of uncertain significance in systemic autoinflammatory diseases | Nature Reviews Rheumatology
The development and implementation of genetic testing has revolutionized the diagnostic landscape of autoinflammatory diseases, leading to an exponential increase in the identification of disease-associated genetic variants. Yet a substantial proportion of these are considered variants of uncertain significance (VUS), complicating both diagnosis and therapeutic decision-making. This challenge is relevant not only for monogenic systemic autoinflammatory diseases, but also in the context of genetically complex disorders that can involve multiple low-penetrance variants. Advances in protein structure prediction tools, machine learning and artificial intelligence provide powerful computational frameworks for the classification of variants; however, their predictive accuracy must be benchmarked against functional assays, particularly with respect to gain-of-function variants. Functional screening approaches benefit from both technological progress and expanding knowledge of the innate immun
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Sounak Sahu @sounaksahu.bsky.social · 08/03/2026
#ISSCR2026 offers exclusive networking opportunities designed to connect you with researchers driving the future of stem cell science. Make connections that progress your research forward and join me at @ISSCR.org 2026 in Montréal, Canada this July. invt.io/1bxbvz1ylsa
invt.io
Network with stem cell leaders at ISSCR 2026.
Learn more.
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Sounak Sahu @sounaksahu.bsky.social · 22/02/2026
Open doors to new collaborations, mentorship, and global recognition in the stem cell community by presenting your research at #ISSCR2026. Abstracts are due 25 February to be considered for oral presentations and travel & merit awards. invt.io/1bxbuzd87lg @isscr.org
invt.io
ISSCR 2026 abstract submission ends 25 February.
Learn more.
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Sounak Sahu @sounaksahu.bsky.social · 13/01/2026
✨ New Year, New Lab, New Beginnings ✨ Join us in New York as we are building our team. We are interested in understanding the molecular and cellular mechanisms underlying human breast development, tissue homeostasis, and breast cancer. www.sahulab.com Please RT.
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Reposted by Sounak Sahu
Alexey Amunts @amunts.bsky.social · 10/01/2026
Only in Shenzhen: Science Nature coffee bar. If you’ve published in @science.org or @nature.com, they give you coffee for free. 100% real!
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Reposted by Sounak Sahu
Rajini Rao @madamescientist.bsky.social · 09/01/2026
Join us for a day long workshop on Human Organoids featuring cutting edge science, including our keynote talk by Prof. Dan Huh from U Penn. Registration is required, but free! Zoom link available on request. 🧪
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Sounak Sahu @sounaksahu.bsky.social · 06/01/2026
The abstract submission deadline for #ISSCR2026 is coming up on 25 February! Submit your research to showcase your findings, connect with global experts, and gain visibility. Travel awards are available for early career researchers. Learn more: invt.io/1bxbl2mzc2q @ISSCR.org
invt.io
Submit an Abstract by 25 February.
Learn more.
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Reposted by Sounak Sahu
Shicheng Guo @shihcheng.bsky.social · 24/12/2025
Analyzed 1,364 breast cancer genomes revealing new driver genes, fusions, and copy number changes. Major step for understanding breast cancer genomics. PMID:41339552, Nature 2025, @Nature doi.org/10.1038/s41586-025-09812-3 #Medsky #Pharmsky #RNA #ASHG #ESHG 🧪
doi.org
Whole-genome landscapes of 1,364 breast cancers | Nature
Breast cancer remains a major global health challenge1. Here, to comprehensively characterize its genomic landscape and the clinical significance of genomic characteristics, we analysed whole-genome sequences from 1,364 clinically annotated breast cancers, with transcriptome data available for most cases. Our study expands the repertoire of oncogenic alterations and identifies novel driver genes, recurrent gene fusions, structural variants and copy number alterations. Timing analyses on copy number alterations suggest that genomic instability emerges decades before tumour diagnosis, and offer insights into early initiation of tumorigenesis. Pattern-driven genomic features, including mutational signatures2, homologous recombination deficiency3, tumour mutational burden and tumour heterogeneity scores4, were associated with clinical outcomes, highlighting their potential utility as predictive biomarkers for clinical evaluation of treatments such as CDK4/6 and HER2 inhibitors, as well as
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Reposted by Sounak Sahu
Prakash Lab @ Miami @vprakashlab.bsky.social · 23/12/2025
🚨 POSTDOC OPENING 🚨 NIH-funded Bio-Fluid Mechanics Postdoc in my lab @univmiami.bsky.social Hofstenia miamia | cilia-driven flows | behavior & neuroscience Collab w/ Mansi Srivastava @harvard.edu 🕒 Start: Jan–Feb 2026 ⏳ 1 yr, renewable | Email me ASAP! #Postdoc #Biophysics #FluidDynamics
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Sounak Sahu @sounaksahu.bsky.social · 05/12/2025
Showcase your research on a global stage at #ISSCR2026! Submit an abstract by 25 February to share your latest stem cell discoveries, translational insights, or clinical advances. Research from all sectors is welcome - academia, industry, and beyond! invt.io/1bxb7k97inn @ISSCR.org
invt.io
Join me at the ISSCR 2026 Annual Meeting!
Register now
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Reposted by Sounak Sahu
Rob Clarke @robclarkelab.bsky.social · 05/11/2025
Really happy to share a link to our work showing that anti-progestin therapy could help prevent breast cancer before menopause. Published today in Nature, the study suggests this could be a new way to stop breast cancer before it starts: urldefense.com/v3/__https:/... Brilliant team science
urldefense.com
Anti-progestin therapy targets hallmarks of breast cancer risk
Nature - Results of an early-phase breast cancer prevention trial demonstrate the potential for breast cancer prevention in premenopausal women with anti-progestin therapy by inducing...
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Sounak Sahu @sounaksahu.bsky.social · 04/11/2025
There are many ways to make your voice heard and participate in all that #ISSCR2026 has to offer! Discover how to get involved, including submitting an abstract, proposing a science spotlight, hosting a meet-up hub, and more! invt.io/1bxbymmubqq @ISSCR.org
invt.io
Join me at the ISSCR 2026 Annual Meeting!
Register now
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Reposted by Sounak Sahu
Geula Hanin @geula.bsky.social · 10/09/2025
🔥🚨 Our new paper is finally out in @narjournal.bsky.social! academic.oup.com/nar/article/53/17/gkaf804/8248607 We built the first comprehensive atlas of dynamic allelic expression in the mouse mammary gland across adulthood, tracking genes across virgin, #pregnancy, #lactation & #involution. 🧵
academic.oup.com
Dynamic allelic expression in mouse mammary glands across the adult developmental cycle
Abstract. The mammary gland, which primarily develops postnatally, undergoes significant changes during pregnancy and lactation to facilitate milk producti
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Reposted by Sounak Sahu
Shicheng Guo @shihcheng.bsky.social · 03/11/2025
In the INAVO120 trial, inavolisib+palbociclib-fulvestrant improved PFS in PIK3CA-mutated, HR+HER2- advanced breast cancer vs placebo+palbociclib-fulvestrant. PMID:40454641, N Engl J Med 2025, @NEJM doi.org/10.1056/NEJMoa2501796 #Medsky #Pharmsky #RNA #ASHG #ESHG 🧪
doi.org
https://doi.org/10.1056/NEJMoa2501796
No description available
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Sounak Sahu @sounaksahu.bsky.social · 03/11/2025
We are hiring a research associate in using stem cells and organoid for breast cancer modeling. Please apply jobs.nyulangone.org/job/22446992... Know more about our ongoing work www.sahulab.com
jobs.nyulangone.org
Research Associate
Start your career journey at NYU Langone Health, where cutting-edge research meets compassionate, patient-centered care.
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Sounak Sahu @sounaksahu.bsky.social · 02/09/2025
Thrilled to announce that I’m joining New York University (NYU) Langone Health as an Assistant Professor. We are diving into the world of embryonic stem cells and organoids to unravel how normal development goes right and how it goes wrong in cancer. med.nyu.edu/faculty/soun...
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Reposted by Sounak Sahu
Kyriaki Michailidou @kmichailidou.bsky.social · 26/05/2025
1/🧬 Excited to share our latest paper in Nature Communications @natcomms.nature.com. We analyzed germline sequencing data from 400,000+ women to strengthen how we classify BRCA1 & BRCA2 variants. 🔗 www.nature.com/articles/s41... 🧵
nature.com
Analysis of more than 400,000 women provides case-control evidence for BRCA1 and BRCA2 variant classification - Nature Communications
BRCA1 and BRCA2 are well known breast cancer predisposition genes, however, many variants have not yet been classified for their pathogenicity. Here, the authors analyse a large combined cohort to pro...
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Reposted by Sounak Sahu
Linda Barlow @bizzarlow.bsky.social · 20/05/2025
Proposed cut to NIH for fiscal 2026- $18 billion www.whitehouse.gov/wp-content/u...
whitehouse.gov
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Reposted by Sounak Sahu
Science News @scinews.bsky.social · 26/11/2024
Comprehensive single-cell aging atlas of healthy mammary tissues reveals shared epigenomic and transcriptomic signatures of aging and Cancer. #NatureAging #Aging #scisky #Medsky #News #Cancer Open Access www.nature.com/articles/s43...
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Sounak Sahu @sounaksahu.bsky.social · 09/01/2025
Excited to share our latest study in @nature.com We used a humanized-mouse ES cell model to explore the functional consequences of all possible BRCA2 missense variants. We've clinically classified >6,500 variants and >1,200 reported in ClinVar! www.nature.com/articles/s41...
nature.com
Saturation genome editing-based clinical classification of BRCA2 variants - Nature
CRISPR–Cas9-based saturation genome editing in a humanized mouse embryonic stem cell line was used for comprehensive functional characterization of single nucleotide variants in a region of BRCA2, and...
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Reposted by Sounak Sahu
Daniel MacPhee 🇨🇦 @d-macphee.bsky.social · 01/01/2025
“During pregnancy, several organs are rewired to support the health of the mother and the offspring. A molecular signalling pathway called RANK–RANKL drives the expansion of the layer that lines the inside of the intestine during pregnancy and lactation.” #ReproSky 🧪 www.nature.com/articles/d41...
nature.com
Gut lining in pregnant and lactating mice expands to ensure offspring health
The RANK–RANKL pathway promotes intestinal epithelial expansion in pregnancy and lactation to meet increased nutritional demands.
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Reposted by Sounak Sahu
Junyue Cao @junyuecao.bsky.social · 29/11/2024
Excited to share our work @science.org. led by our incredible @tommyz626.bsky.social at @rockefelleruniv.bsky.social! By profiling 21 million single cells across life stages, we reveal aging as distinct, development-like transitions, with dramatic cell population changes in specific time windows!
tinyurl.com
A panoramic view of cell population dynamics in mammalian aging
To elucidate aging-associated cellular population dynamics, we present PanSci, a single-cell transcriptome atlas profiling over 20 million cells from 623 mouse tissues across different life stages, se...
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Reposted by Sounak Sahu
Karl Koehler @krkoehler.bsky.social · 21/11/2024
Exciting to see the collection of HCA papers out this week in Nature. Honored to be in the mix with our collaboration with @mhaniffa.bsky.social and Sarah Teichmann on a fetal skin atlas. Bravo to Hudaa, Elena, and Bayanne et al, for pulling this study together. A tremendous effort! rdcu.be/d02Yx
rdcu.be
A prenatal skin atlas reveals immune regulation of human skin morphogenesis
Nature - A comprehensive multi-omics reference atlas of prenatal human skin shows that innate immune cells crosstalk with non-immune cells to perform pivotal roles in skin morphogenesis, including...
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