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Pangenome Mutation-Annotated Network (PanMAN) is a pangenome data structure that encodes shared mutational and evolutionary histories across microbial genomes, providing both high compression and enha...

Contribute to russcd/corePivotal development by creating an account on GitHub.

This Resource paper presents a global SARS-CoV-2 phylogenetic tree of 4,471,579 high-quality genomes consistently constructed by Viridian, an efficient amplicon-aware assembler.

Abstract. The increasing scale of population genomic datasets presents computational challenges in estimating summary statistics such as nucleotide diversi

Abstract. Understanding the genetic basis of adaptive responses to environmental and human mediated pressures is a central concern in evolutionary biology.

RNA viruses like SARS-CoV-2 have a high mutation rate, which contributes to their rapid evolution. The rate of mutations depends on the mutation type (e.g., A→C, A→G, etc.) and can vary between sites ...

CDC’s Advanced Molecular Detection program leads national efforts to develop and expand the use of

UCSC Genome Browser