Reposted by Peter Innes
I am thrilled to share our pre-print for CBS-tools: a k-mer based analysis that utilizes whole-genome sequencing of a few sex-identified isolates to guide users from the discovery of the heterogametic sex through identifying the sex-determination region
www.biorxiv.org/content/10.6...
biorxiv.org
Identifying, phasing, and structurally annotating sex chromosomes for genome assemblies using CBS-tools
A complete reference genome for species with chromosomally-determined separate sexes should contain scaffolds for all sex chromosome homologs. However, sex chromosomes present distinct computational c...