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Mihai Todor

@mihaitodor.bsky.social
613 followers 1K following 232 posts

Software Engineer interested in computational biology / *omics 🧬. Cambridge, UK. He / Him.

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Reposted by Mihai Todor
Sean Carroll @seanmcarroll.bsky.social · 12/10/2026
Mindscape Ask Me Anything | October 2026. We talk about philosophical naturalism, what Einstein would think about Many-Worlds, and the impact of AI on science and math. #MindscapePodcast preposterousuniverse.com/podcast/2026...
Title card for Mindscape AMA episode, Oct 2026.
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Sean Carroll @seanmcarroll.bsky.social · 05/10/2026
Mindscape 370 | Daniel Akerib on a Faint Hint of Dark Matter. The LZ experiment has seen one intriguing event - should we get excited? #MindscapePodcast preposterousuniverse.com/podcast/2026...
Title card for Mindscape episode with Daniel Akerib.
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Nobel Prize @nobelprize.org · 05/10/2026
BREAKING NEWS The 2026 Nobel Prize in Physiology or Medicine has been awarded to Karl Deisseroth, Peter Hegemann and Georg Nagel “for their discoveries concerning light-gated ion channels and optogenetics.”
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Mihai Todor @mihaitodor.bsky.social · 07/09/2026
It seems to me that you skipped some essential steps before getting that CTO role. Punching down instead of trying to understand diverse perspectives is not a good look.
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Jennifer Ouellette @jenlucpiquant.bsky.social · 19/08/2026
mRNA cancer vaccine succeeded in Phase 3 melanoma trial, Moderna and Merck say arstechnica.com/health/2026/...
arstechnica.com
mRNA cancer vaccine succeeded in Phase 3 melanoma trial, Moderna and Merck say
The vaccine reportedly thwarted the cancer's return and spread.
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Reposted by Mihai Todor
Katie Mack @astrokatie.com · 07/08/2026
I am absolutely thrilled to present to you: How to Build a Universe (Theoretically Speaking) available for pre-order now, wherever you buy your books! www.simonandschuster.ca/books/How-to...
Cover of the book "How to Build a Universe (Theoretically Speaking)" by Katie Mack. The top right corner says "Author of The End of Everything" and the bottom left says "Brilliant and thrilling! - John Green". The cover motif is a space image made of puzzle pieces.
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Sean Carroll @seanmcarroll.bsky.social · 26/07/2026
We don’t want to suggest that all of Emily Wilson’s subsequent good fortune is due to appearing as a guest on #MindscapePodcast. preposterousuniverse.com/podcast/2024...
preposterousuniverse.com
297 | Emily Wilson on Homer, Poetry, and Translation – Sean Carroll
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Reposted by Mihai Todor
Sean Carroll @seanmcarroll.bsky.social · 20/07/2026
Mindscape 361 | Bonnie Bassler on How Bacteria Talk and Work Together. Quorum sensing is one of the vivid differences between even the simplest organism and non-living stuff. #MindscapePodcast preposterousuniverse.com/podcast/2026...
Title card for Mindscape podcast episode with Bonnie Bassler
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Reposted by Mihai Todor
Sean Carroll @seanmcarroll.bsky.social · 13/07/2026
Mindscape Ask Me Anything | July 2026. Boltzmann Brains, science in science fiction, uses of LLMs, confronting the forces of anti-science, and more. #MindscapePodcast preposterousuniverse.com/podcast/2026...
Title card for Mindscape AMA episode.
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Sean Carroll @seanmcarroll.bsky.social · 22/06/2026
Mindscape 358 | Solo: Vacuum Energy and the Cosmological Constant. I start talking about why the universe is accelerating -- but there was too much to say, so next week we'll have a follow-up episode. #MindscapePodcast www.preposterousuniverse.com/podcast/2026...
Title card for Mindscape episode 358 | Solo: Vacuum Energy and the Cosmological Constant
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Mihai Todor @mihaitodor.bsky.social · 22/06/2026
Golang date formatting is a strange beast… It does work, but here be 🐉
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Sean Carroll @seanmcarroll.bsky.social · 08/06/2026
Mindscape 356 | Andrea Wulf @andreawulf.bsky.social on Enlightenment, Nature, Romanticism, and Modernity. #MindscapePodcast www.preposterousuniverse.com/podcast/2026...
Title card for Mindscape podcast episode with Andrea Wulf.
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Michel Lind @michel-slm.name · 08/06/2026
I just signed european.social as well. Regardless of whether you think EU governments are too prone to weaken privacy protections or not, it's clear that - monopolistic, authoritarian #SocialMedia platforms are a problem #europe
european.social
The European Social Stack — An open declaration
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Sean Carroll @seanmcarroll.bsky.social · 25/05/2026
Mindscape 355 | Solo: Looking Quantum Mechanics in the Eyeball. I argue that QM is even farther from the everyday world than we generally assume, but connecting them is an ongoing and promising project. #MindscapePodcast www.preposterousuniverse.com/podcast/2026...
Title card for Mindscape episode -- Solo: Looking Quantum Mechanics in the Eyeball.
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Timothy Stiles @stiles.io · 08/05/2026
I need a job asap. Who's hiring?
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Sean Carroll @seanmcarroll.bsky.social · 27/04/2026
Mindscape 352 | Bing Brunton @bingbrunton.bsky.social on Connecting the Connectome to the Body. #MindscapePodcast www.preposterousuniverse.com/podcast/2026...
Title card for Mindscape Podcast episode with Bing Brunton.
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Sean Carroll @seanmcarroll.bsky.social · 13/04/2026
Mindscape 350 | J. Eric Oliver @ericoliver.bsky.social on the Self and How to Know It. #MindscapePodcast www.preposterousuniverse.com/podcast/2026...
Title card for podcast episode with J. Eric Oliver.
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Mihai Todor @mihaitodor.bsky.social · 20/03/2026
Ooooh, I completely forgot about this song. Thanks for sharing!
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Mihai Todor @mihaitodor.bsky.social · 20/03/2026
So sorry to see that :( 🫂
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Protein Data Bank in Europe (PDBe) @pdbeurope.bsky.social · 18/03/2026
𝗣𝗗𝗕𝗲 𝗺𝗺𝗖𝗜𝗙 𝗩𝗮𝗹𝗶𝗱𝗮𝘁𝗼𝗿: validate your mmCIF files against PDBx/mmCIF dictionary ✅ Real-time check ✅ Metadata completeness indicator pip install pdbe-mmcif-validator install VS code extension: marketplace.visualstudio.com/items?itemNa... GitHub - PDBeurope/mmcif-validator: github.com/PDBeurope/mm...
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Natalie Wynn @contrapoints.bsky.social · 09/03/2026
NEW VIDEO youtu.be/uiGIbdrQjbI?...
youtu.be
Saw | ContraPoints
YouTube video by ContraPoints
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EMBL-EBI @ebi.embl.org · 17/02/2026
The AlphaFold Database, jointly developed with Google DeepMind, now contains datasets from specialist communities. This includes rich datasets for microbes, viruses & parasites associated with tropical diseases. Explore the new datasets in the AlphaFold Database. www.ebi.ac.uk/about/news/u...
ebi.ac.uk
AlphaFold Database welcomes community datasets
Latest AlphaFold Database update adds high-value datasets for microbial and viral proteins, generated by specialist communities
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Sean Carroll @seanmcarroll.bsky.social · 26/01/2026
Mindscape 342 | Rachell Powell on Evolutionary Convergence, Mind, and Morality. Do social structures, like eyes and fins, arise independently from evolutionary pressures? #MindscapePodcast www.preposterousuniverse.com/podcast/2026...
Title card for Mindscape podcast episode with Rachell Powell.
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Sean Carroll @seanmcarroll.bsky.social · 19/01/2026
Mindscape 341 | Stewart Brand on Maintenance as an Organizing Principle. Yes, Zen and the Art of Motorcycle Maintenance comes up. #MindscapePodcast www.preposterousuniverse.com/podcast/2026...
Title card for podcast episode with Stewart Brand.
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Mihai Todor @mihaitodor.bsky.social · 19/01/2026
It also interferes with muscle memory. The more junk I see, the harder it is to avoid second-guessing myself.
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Theory of Living Matter Group @tlmcambridge.bsky.social · 12/01/2026
🚨Our first talk this new year would be a joint theory/experiment talk by Prof. Marino Arroyo and Prof. Xavier Trepat @xaviertrepat.bsky.social describing some of their recent work together on active morphogenesis🧫. Sign up to our mailing list for a zoom link to this talk and other upcoming talks🚨
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Jennifer Ouellette @jenlucpiquant.bsky.social · 21/12/2025
Stunning 4K Drone Footage Over Iceland’s Mystical Landscapes and Seascapes laughingsquid.com/iceland-4k-d...
laughingsquid.com
Stunning 4K Drone Footage Over Iceland's Mystical Landscapes and Seascapes
Photographer Jan Erik Waider captures stunning 4K drone footage of Iceland's mystical landscapes and seascapes.
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Mihai Todor @mihaitodor.bsky.social · 26/11/2025
This event was amazing! Thank you for organising it @tlmcambridge.bsky.social!
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Mihai Todor @mihaitodor.bsky.social · 07/11/2025
FOSDEM 2026 added a developer room for Bioinformatics and Computational Biology: fosdem-bioinformatics.github.io/cfp.html 🧬
fosdem-bioinformatics.github.io
Call for Participation: 1st Bioinformatics and Computational Biology Developer Room at FOSDEM 2026
A minimal website for the FOSDEM Bioinformatics and Computational Biology community
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Reposted by Mihai Todor
Martin Steinegger 🇺🇦 @martinsteinegger.bsky.social · 22/10/2025
End-to-end protein design in the browser through evedesign. Generate and interactively explore designs in 2D/3D and export them as codon-optimized DNA. The underlying open source framework (released soon) is build to easily add new methods, more on that soon. 🌐 evedesign.bio
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Mihai Todor @mihaitodor.bsky.social · 21/10/2025
Very cool! Sounds like we're getting critical mass in Europe @hazelweakly.me :)
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Mihai Todor @mihaitodor.bsky.social · 19/10/2025
So nice to see you're still working on this project. Thank you for all the amazing work! ❤️
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Andrew Gallant @burntsushi.net · 16/10/2025
ripgrep 15 is out! Mostly a host of bug fixes, particularly around gitignore. Some minor perf improvements. A couple small features. And (partial) Jujutsu support for gitignore. github.com/BurntSushi/r...
github.com
Release 15.0.0 · BurntSushi/ripgrep
Sponsorship is appreciated! ripgrep 15 is a new major version release of ripgrep that mostly has bug fixes, some minor performance improvements and minor new features. In case you haven't heard of...
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Mihai Todor @mihaitodor.bsky.social · 09/10/2025
My project coordinator, Jennifer Fleming, did a detailed podcast on AlphaFold: www.linkedin.com/posts/artifi...
linkedin.com
AlphaFold: AI's Biggest Breakthrough 🧪🤖 We're thrilled to welcome Dr Jennifer Fleming, Coordinator at the Protein Data Bank in Europe (PDBe) and AlphaFold Protein Structure Database (AFDB) le...
AlphaFold: AI's Biggest Breakthrough 🧪🤖 We're thrilled to welcome Dr Jennifer Fleming, Coordinator at the Protein Data Bank in Europe (PDBe) and AlphaFold Protein Structure Database (AFDB) lead, for ...
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Mihai Todor @mihaitodor.bsky.social · 09/10/2025
Very insightful research into social networks
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Reposted by Mihai Todor
Sean Carroll @seanmcarroll.bsky.social · 06/10/2025
Mindscape 331 | Solo: Fine-Tuning, God, and the Multiverse. In which I shamelessly steal material from the #PhilosophyOfCosmology course I am teaching to talk about some big questions. #MindscapePodcast www.preposterousuniverse.com/podcast/2025...
Title card for Mindscape Podcast episode on Fine-Tuning, God, and the Multiverse.
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Mihai Todor @mihaitodor.bsky.social · 07/10/2025
Hope they step on dog poo
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Derek Lowe @dereklowe.bsky.social · 06/10/2025
The latest in a long series of Nobels for work in immunology - and it won’t be the last (!)
science.org
T-reg Cells: The 2025 Medicine Nobel
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Mihai Todor @mihaitodor.bsky.social · 28/09/2025
If one is so fortunate as to find a place in the world. And another soul with whom one's loneliness can reside. 2/2
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Mihai Todor @mihaitodor.bsky.social · 28/09/2025
Maybe a bit cheesy, but I really liked this dialogue from a movie called Mr Holmes: It's us, on this side, who are, all of us so... Alone? I have been alone... all my life. But with the compensations of the intellect. - And is that enough? - It can be. 1/2
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EMBL-EBI @ebi.embl.org · 23/09/2025
Do you study proteins? The new PDBe entry pages make it easier to explore protein structures. 🟢 Visualise ligands & macromolecules with improved 3D viewers 🟢 Get background info from AI-based annotations 🟢 Add your own annotations to viewers without leaving the browser @pdbeurope.bsky.social 🧬🖥️
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Protein Data Bank in Europe (PDBe) @pdbeurope.bsky.social · 19/09/2025
Making structural biology data accessible to everyone — from specialists to first-time explorers. ✨ Discover the new interactive, personalised & mobile-ready PDBe Entry Pages. 📖 Read more: www.ebi.ac.uk/about/news/u... 🔍 Try it: www.ebi.ac.uk/pdbe/entry/p...
ebi.ac.uk
New PDBe entry pages: Interactive, personalised, and mobile-ready
Explore molecular structures with new interactive 3D viewers and AI annotations
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Mihai Todor @mihaitodor.bsky.social · 21/08/2025
age.apache.org perhaps. I've been meaning to play with it for a while...
age.apache.org
Apache AGE, Graph database optimized for fast analysis and real-time data processing. It is provided as an extension to PostgreSQL.
Apache AGE is a PostgreSQL extension that has been registered as an Apache Top level project since May 2022.
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Mihai Todor @mihaitodor.bsky.social · 16/08/2025
Spot on and really well written!
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Protein Data Bank in Europe (PDBe) @pdbeurope.bsky.social · 11/08/2025
Thanks for the visit Nobel laureate John Jumper & colleagues Kathryn Tunyasuvunakool and Lindsay Willmore from Google DeepMind. Always interesting to hear and discuss #AlphaFold and protein structure predictions.
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Mihai Todor @mihaitodor.bsky.social · 04/08/2025
That Dio look: www.youtube.com/watch?v=2lvs...
youtube.com
Dio - Holy Diver (Official Music Video) [HD]
YouTube video by RHINO
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Mihai Todor @mihaitodor.bsky.social · 04/08/2025
Also, I don't think the tab sprawl is really an issue for me, just an artifact of how I use the internet.
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Mihai Todor @mihaitodor.bsky.social · 04/08/2025
Ummmm, no thank you :) Reading a wall of AI-generated text is deeply unappealing to me. The human touch from those articles is really important and, if I discard that by passing them through AI, then my information retention goes through the floor.
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Mihai Todor @mihaitodor.bsky.social · 04/08/2025
But that wouldn’t really help me… I’d either just pin all of them by default or get frustrated that I lost the breadcrumbs I left for myself. Some of that does get stale after a while, but, oh well…
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Mihai Todor @mihaitodor.bsky.social · 03/08/2025
They're spread across about 100 windows. Most of them are minimised. The rest I can cycle through using the keyboard, since that's the stuff I should go through ASAP. Also, the tab search feature comes in handy. Browsers are pretty great at unloading tabs from memory, so they don't hog resources.
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