Sign in

Prof. Ruth Ley FRS

@microbiome.bsky.social
2.6K followers 222 following 158 posts

Director of Department of Microbiome Science at MPI Biology Tübingen Germany. Also known as Leylab.com.

PostsRepliesMedia
Prof. Ruth Ley FRS @microbiome.bsky.social · 14/09/2026
It’s more like an assistant professorship actually, without the possibility of tenure. But it’s 6 to 9 years of funding without teaching so great for those who want a pure research opportunity. Add grants on top! 🧫🧪🦠
0176
Reposted by Prof. Ruth Ley FRS
Max-Planck-Gesellschaft @maxplanck.de · 09/09/2026
We are hiring! Start at a #MaxPlanckInstitute with your own independent Max Planck Research Group. This position is equivalent to a W2 Professorship at a German university, or Associate Professor internationally. 🔗Apply until October 14th! www.mpg.de/career/max-p... #ScienceCareer #MPRG #TenureTrack
Call for independent Max Planck Research Groups
0112136
Reposted by Prof. Ruth Ley FRS
Marcos Bermejo Ruiz @marcosbermejo.bsky.social · 14/09/2026
Going beyond Hi-C metagenomics! In our new pre-print, we adapt the Micro-C protocol to microbiomes. Achieving higher resolution, we recovered 3D genomes and bacterial-plasmid links. Check it here: www.biorxiv.org/content/10.6... @microbiome.bsky.social
2177
Reposted by Prof. Ruth Ley FRS
Anna Bogdanova @anya-bogdanova.bsky.social · 11/09/2026
So inspired by #ECCB2026! Great talks, amazing people, and a real effort to bridge science with the public. It was a privilege to present my project on flagellome profiling, which takes our FlaPro pipeline :)
043
Reposted by Prof. Ruth Ley FRS
Nature Reviews Microbiology @natrevmicro.nature.com · 26/08/2026
ICYMI: New online! Bacterial lipid structural diversity mediates commensalism and pathogenesis
dlvr.it
Bacterial lipid structural diversity mediates commensalism and pathogenesis
Nature Reviews Microbiology, Published online: 19 August 2026; doi:10.1038/s41579-026-01351-6In this Review, Heaver and Ley overview the different lipid structures present in commensal and pathogenic bacteria and their recognition by Toll-like receptor 2, Toll-like receptor 4 and CD1 molecules, highlighting the different effects on host immune responses.
073
Prof. Ruth Ley FRS @microbiome.bsky.social · 24/08/2026
This is great! Just the other day we were sitting around wondering how colibactin worked within microbiomes!
000
Prof. Ruth Ley FRS @microbiome.bsky.social · 19/08/2026
A great review by the great @staceyheaver.bsky.social - all about bacterial lipids and their interactions with the host 🧪🧫🦠
0169
Prof. Ruth Ley FRS @microbiome.bsky.social · 18/08/2026
If you are looking for a post doc you are in luck: Hassan Salem is the antidote to AI slop: rigorous thinking, exquisite experiments, has read the literature all the way back
1107
Prof. Ruth Ley FRS @microbiome.bsky.social · 13/08/2026
I think this is it, indeed.
010
Reposted by Prof. Ruth Ley FRS
Joint Genome Institute @jgi.doe.gov · 03/08/2026
Interested in working with the JGI and never led a proposal with us? Now is your chance! We are accepting submissions to our New Investigator call for first-time PIs. Deadline to submit is Sept. 9. jointgeno.me/CSPnewPI @berkeleylab.lbl.gov @biosci.lbl.gov
jointgeno.me
CSP New Investigator Call | Joint Genome Institute
The CSP New Investigator Call is for investigators and research initiatives new to the JGI. Projects must be independent of ongoing JGI proposals, and lead PIs cannot have been lead PI on any previous...
0812
Prof. Ruth Ley FRS @microbiome.bsky.social · 04/08/2026
This is so true!
000
Reposted by Prof. Ruth Ley FRS
Alexander Tyakht @atyakht.bsky.social · 31/07/2026
🔬🧬 PhD defense: Expanding Human Gut Microbiome Diversity Beyond Western Populations: Methanogens and Helminths - Mirabeau Mbong Ngwese Congratulations, Mirabeau! @microbiome.bsky.social
181
Reposted by Prof. Ruth Ley FRS
Michigan Maple Man 🍁🇨🇦 🇬🇱🥄🌲🐓⛷️🚵🏼‍♀️🎻🏕️🔨💋🐝🪵🌻🌈❄️🛶💙📎🐸 @mimapleman.bsky.social · 30/07/2026
32212694742
Reposted by Prof. Ruth Ley FRS
André Nadler @nadlerlab.bsky.social · 29/07/2026
Lipids build the membranes of all cells, but identifying their precise functions is extremely challenging. Here’s our attempt to change that: How to find and understand lipid-protein interactions, by Katelyn Cook & company. www.biorxiv.org/content/10.6...
716170
Reposted by Prof. Ruth Ley FRS
Beatrice Ramm @beatriceramm.bsky.social · 30/07/2026
A minimal lipid kinase/phosphatase system, two effector proteins from Legionella pneumophila, self-organizes together with its lipid substrates (PI/PI3P) into dynamic patterns on membranes. Check out our preprint: www.biorxiv.org/content/10.6...
23710
Prof. Ruth Ley FRS @microbiome.bsky.social · 28/07/2026
So true
000
Reposted by Prof. Ruth Ley FRS
Pedro Leão @pedroleao.bsky.social · 05/06/2026
I'm happy to share the first pre-print of out Lab! 🎉 Introducing ArchaeaHQ www.biorxiv.org/content/10.6... We curated 21,644 genomes across all 4 archaeal kingdoms to bridge the gap in public datasets for computational biology What is inside ArchaeaHQ... (1/2)
310336
Reposted by Prof. Ruth Ley FRS
American Statistical Association History of Statistics @hos-asa.bsky.social · 21/07/2026
Few statisticians know that Frank Yates, pioneer of experimental design, is responsible for the annoying practice of indicating 3 tiers of statistical significance by stars (*p ≤ 0.05, **p ≤0.01, ***p ≤ 0.001). He soon regretted it and “vehemently opposed its unthinking use”. And here we are.
112954
Prof. Ruth Ley FRS @microbiome.bsky.social · 18/07/2026
Very proud of @anya-bogdanova.bsky.social ‘s work here with @atyakht.bsky.social - there are thousands of different bacterial flagellins out there and her tool helps make sense of them and predict how they interact with the innate immune receptor TLR5🦠🧫🧪
120
Prof. Ruth Ley FRS @microbiome.bsky.social · 16/07/2026
Sort your flagellins into silent and stimulatory with this cool tool!! 🧫🦠
031
Prof. Ruth Ley FRS @microbiome.bsky.social · 03/07/2026
Congratulations Taichi!!
010
Prof. Ruth Ley FRS @microbiome.bsky.social · 28/06/2026
True 😭
030
Prof. Ruth Ley FRS @microbiome.bsky.social · 28/06/2026
My experience also after feeding it one of our published papers. If reviewers keep feeding revisions into q.e.d., we will never be done with the review cycles
1101
Prof. Ruth Ley FRS @microbiome.bsky.social · 27/06/2026
Thanks. Ugh.
020
Prof. Ruth Ley FRS @microbiome.bsky.social · 27/06/2026
Thanks for this, Ran! How is the gender distribution for who’s up in the 1%?
1100
Reposted by Prof. Ruth Ley FRS
MPI for Biology Tübingen & Friedrich Miescher Laboratory @mpi-bio-fml.bsky.social · 23/06/2026
Congratulations to our Emeritus Director Thomas Boehm on receiving his third ERC Advanced Grant @erc.europa.eu for his ImmunoPlast project to explore the extraordinary immune systems of deep-sea anglerfishes. Read the full article: www.bio.mpg.de/527824/thoma...
0103
Reposted by Prof. Ruth Ley FRS
Nature Microbiology @natmicrobiol.nature.com · 19/06/2026
Out Now! A phage takes the wheel #MicroSky
go.nature.com
A phage takes the wheel
Nature Microbiology, Published online: 19 June 2026; doi:10.1038/s41564-026-02405-4Prophage FRφ rewires the flagellar apparatus of its Enterobacter sp. host through RNA-guided repression of native flagellin, favouring its own phage-encoded isoform. This enhances host motility and reduces immune recognition, boosting bacterial fitness in mice.
0165
Reposted by Prof. Ruth Ley FRS
Ed Rybicki 🇿🇲🇿🇦🇬🇧🍷🚀 @edrybicki.bsky.social · 20/06/2026
It has become increasingly obvious in recent years that bactrial viruses in particular often confer serious advantages on their hosts - and are less parasites than symbiotes.
283
Reposted by Prof. Ruth Ley FRS
Mel Andrews @bayesianboy.bsky.social · 17/06/2026
When utilized in literature review, LLMs consistently 1. fail to mention female authors in female-led literatures, 2. insist that men are more influential or more heavily cited when this is contradicted by objective citation counts, and 3. attribute women’s work to hallucinated male scholars.
8153382302
Prof. Ruth Ley FRS @microbiome.bsky.social · 01/06/2026
The future of the @maxplanck.de is in good hands
070
Prof. Ruth Ley FRS @microbiome.bsky.social · 29/05/2026
Congratulations!
110
Prof. Ruth Ley FRS @microbiome.bsky.social · 27/05/2026
Thank you!!
010
Reposted by Prof. Ruth Ley FRS
MPI for Biology Tübingen & Friedrich Miescher Laboratory @mpi-bio-fml.bsky.social · 27/05/2026
We are proud to share that Ruth Ley @microbiome.bsky.social , Director of the Department of Microbiome Science, has been elected Fellow of The Royal Society @royalsociety.org . Congratulations!!!
bio.mpg.de
Ruth Ley elected Fellow of the Royal Society
85312
Prof. Ruth Ley FRS @microbiome.bsky.social · 26/05/2026
Sean Eddy??!!! Speechless.
030
Reposted by Prof. Ruth Ley FRS
Carl T. Bergstrom @carlbergstrom.com · 25/05/2026
"Please provide a justification for the foreign collaboration." Science.
11768158
Prof. Ruth Ley FRS @microbiome.bsky.social · 22/05/2026
@kelseyhuus.bsky.social is also the recipient of a Max Planck partner group, which will give her some additional funds for 5 years! Go Kelsey go!! @maxplanck.de
0130
Prof. Ruth Ley FRS @microbiome.bsky.social · 07/05/2026
Let us know what you thought and thanks for reading it!
110
Prof. Ruth Ley FRS @microbiome.bsky.social · 03/05/2026
Come and work with us in a beautiful corner of Germany: 5 years of funding for your microbiology research and lots of great colleagues 🦠🧫
12623
Reposted by Prof. Ruth Ley FRS
Tony Firulli @tonyfirulli.bsky.social · 30/04/2026
It is apparently a hoax en.mediamass.net/people/craig...
en.mediamass.net
Craig Venter dead 2026 : Scientist killed by celebrity death hoax - Mediamass
News of scientist Craig Venter’s death spread quickly earlier this week, causing concern among fans across the world. However, the April 2026 report has now been confirmed as a complete hoax, the 79-y...
232
Reposted by Prof. Ruth Ley FRS
J. Craig Venter Institute @jcvi.org · 30/04/2026
It is with great sadness that we announce J. Craig Venter has died. 🧪🧬 www.jcvi.org/media-center...
jcvi.org
J. Craig Venter, genomics pioneer and founder of JCVI and Diploid Genomics, Inc., dies at 79
La Jolla, California—April 29, 2026—The J. Craig Venter Institute (JCVI) announced that J. Craig Venter, Ph.D., the Institute’s founder, board...
3187123
Reposted by Prof. Ruth Ley FRS
Mizrahi Lab @mizrahilab.bsky.social · 26/04/2026
"Tell me who your friends are, and I’ll tell you who you are." It turns out, microbes follow the same rule! Very proud to share our lab's new paper in @natmicrobiol.nature.com showing that bacteria don't just respond to their environment, they respond to each other. www.nature.com/articles/s41...
nature.com
Community context reshapes microbial proteomes and reduces functional overlap - Nature Microbiology
Biotic interactions modulate protein abundance, reducing functional redundancy and increasing productivity in complex bacterial communities.
25930
Reposted by Prof. Ruth Ley FRS
Tami Lieberman @contaminatedsci.bsky.social · 22/04/2026
Interested in a *staff computational scientist* position? We are looking for an experienced computational biologist (ideally with microbiology experience) to support published packages while also driving new research. Pay range $73k-$111k w excellent benefits. careers.peopleclick.com/careerscp/cl...
careers.peopleclick.com
Computational Biology Program Scientist
MIT - Computational Biology Program Scientist - Cambridge MA 02139
14574
Prof. Ruth Ley FRS @microbiome.bsky.social · 18/04/2026
Thanks for sharing! We have also run into walls with datasets from papers that were used to launch companies. So you have VC’s investing millions based on a single paper whose findings can’t be checked. Otherwise, though, there are still many good datasets out there and cooperative authors!
150
Prof. Ruth Ley FRS @microbiome.bsky.social · 14/04/2026
Hey Reviewer 2: I hope you are OK. If you are OK and you liked our microbiome-fever paper revisions at all, any chance you can send a quick note to the editor? 🦠🧫
080
Reposted by Prof. Ruth Ley FRS
Sarah McAnulty, Ph.D. @sarahmackattack.bsky.social · 24/03/2026
Ya know a while back a senior microbiologist I was talking with was saying how we absolutely have got to stop saying gut flora because people are gonna think it’s plants and I was like “ha yeah” while thinking “nah come on people know starfish aren’t fish” and ope! he was right.
1032368
Reposted by Prof. Ruth Ley FRS
Andreas Bäumler @abaumler.bsky.social · 19/03/2026
Here we show that buildup of uremic toxins during CKD generates nitrate in the colon. Nitrate supports expansion of Enterobacteriaceae, turning them into a major source of uremic toxins. Inhibiting nitrate production (iNOS inhibition) mitigates disease progression. www.science.org/eprint/YGNMK...
275
Prof. Ruth Ley FRS @microbiome.bsky.social · 18/03/2026
So why do MDs get way more money than PhDs for the same job?
110
Prof. Ruth Ley FRS @microbiome.bsky.social · 18/03/2026
Congratulations Lisa!
010
Prof. Ruth Ley FRS @microbiome.bsky.social · 18/03/2026
Yes. But it also levels the playing field (down, admittedly) for people whose English isn’t their first language. I use it all the time in German and am super super grateful for it. I hope Germans don’t immediately delete what I send them 🤔
140
Prof. Ruth Ley FRS @microbiome.bsky.social · 18/03/2026
How about you??
221