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Nastassia Patin

@microbesatsea.bsky.social
438 followers 153 following 56 posts

Bioinformatician, marine scientist, eDNA enthusiast, microbe lover. CalCOFI. SIO / SCCWRP / NOAA. West Coast OBON co-leader.

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Reposted by Nastassia Patin
Carl T. Bergstrom @carlbergstrom.com · 28/04/2026
More details on the firing of the National Science Board. The NSF now has no director, deputy director, or board. They have issued almost no new awards in 2026. The plan appears to be to completely destroyed the agency. The details are horrifying and have Russ Vought written all over them.
insidehighered.com
Board Ouster Raises Further Concerns About NSF’s Future
The White House axed all members of the board overseeing the National Science Foundation Friday, leaving the agency with no board, director or deputy director. It finally provided a reason Monday afte...
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Nastassia Patin @microbesatsea.bsky.social · 27/04/2026
We (CalCOFI) are hiring a seagoing eDNA technician to help us operationalize autonomous sampling. Please share widely! employment.ucsd.edu/marine-edna-...
employment.ucsd.edu
Marine eDNA Seagoing Technician - 139086
Marine eDNA Seagoing Technician - 139086 | Careers at UC San Diego
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Nastassia Patin @microbesatsea.bsky.social · 21/04/2026
Interested in passive eDNA methods? We have a fun new paper out looking at SCUBA diver visual surveys and their little pucks: onlinelibrary.wiley.com/doi/10.1002/...
onlinelibrary.wiley.com
Evaluating the Potential for Citizen Science Divers to Monitor Fish Biodiversity Through Passive eDNA Collection
Passive capture of eDNA can be used as a tool for citizen scientist SCUBA divers to supplement visual surveys for marine species detection and is particularly useful for species that are rare or visu...
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Reposted by Nastassia Patin
Anthony Edwards @edwardsanthonyb.bsky.social · 07/04/2026
A century of records completely rewritten nearly every day for the past month at the Scripps Pier in La Jolla (San Diego).
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Josh Marshall @joshtpm.bsky.social · 04/04/2026
This is very very big. Like a big deal and massive cuts. These can’t even be seen as budgetary since you don’t get much savings in the context of trillions budget. They want the US out of R&D out of science research.
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Scripps Institution of Oceanography @scrippsocean.bsky.social · 26/03/2026
​​🌊The ocean off California has transformed dramatically over the past decade, from marine heatwaves to harmful algal blooms to shifting ecosystems. Join us May 27–28 for the CalCOFi Conference 2026: A Decade of Remarkable Change. Register and submit an abstract here: calcofi.org/conference/c...
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Nastassia Patin @microbesatsea.bsky.social · 26/03/2026
If you have ever struggled to interpret fish eDNA taxonomy assignments, you are not alone! This was a fun paper that hopefully provides important context and practical advice for working with metabarcoding data targeting fishes: mbmg.pensoft.net/article/1744...
mbmg.pensoft.net
Guidance and best practices for species identification using eDNA metabarcoding – When do you call a cod a cod?
With the rapid uptake of environmental DNA (eDNA) metabarcoding for a wide range of conservation and management uses, there is a growing need for guidance and best practices for species identification...
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Jennifer Ouellette @jenlucpiquant.bsky.social · 03/03/2026
Meet three scientists who said no to Epstein. The warning signs included a web search, a mother’s doubts, and inklings of a “sexist attitude” www.science.org/content/arti...
science.org
Meet three scientists who said no to Epstein
The warning signs included a web search, a mother’s doubts, and inklings of a “sexist attitude”
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Max Kozlov @maxkozlov.bsky.social · 27/02/2026
Congress rejected massive cuts to US science budgets for 2026, but much of the money still isn’t flowing to researchers. The culprit? The White House Office of Management and Budget (OMB) is quietly slow-walking the release of funds. 🧵👇
nature.com
White House stalls release of approved US science budgets
The US Congress rejected sweeping cuts to science agencies. But the NIH, the NSF and NASA have had their spending slowed.
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Philipp Bayer @philippbayer.bsky.social · 26/02/2026
We (PYC Therapeutics) are hiring two biostatisticians, one senior, one junior www.seek.com.au/job/90561321... and www.seek.com.au/job/90560959... We need people who can give us confidence in rare disease diagnostics with small n! #biostatistics
seek.com.au
Technical Lead Biostatistics Job in Nedlands, Perth WA - SEEK
Life-changing science is our focus; we start there, and everything else follows
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Nastassia Patin @microbesatsea.bsky.social · 24/02/2026
I'm looking for a postdoc to apply quantitative molecular techniques to marine environmental DNA! We are interested in maximizing the biodiversity data we can get from low biomass and degraded samples. Please see the West Coast OBON website or DM me for info. evsatt.github.io/WC-OBON_Webs...
evsatt.github.io
Opportunities – West Coast OBON
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𝙽𝚊𝚜𝚑 𝙸𝚜 𝙷𝚎𝚛𝚎 𝙵𝚘𝚛 𝙸𝚝 @nashishereforit.bsky.social · 17/02/2026
Wow.
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Christina Stallings @stallingslab.bsky.social · 08/01/2026
We are hiring new faculty!! Come join our amazing community in the Department of Molecular Microbiology at Washington University School of Medicine! The deadline for applications is 2/21, but applications will be reviewed on a rolling basis. facultyopportunities.wustl.edu/Posting/Deta...
facultyopportunities.wustl.edu
Opportunity Details - Faculty Opportunities
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Nastassia Patin @microbesatsea.bsky.social · 01/01/2026
This flew under the radar for me but in 2025 California banned cat declawing! Happy New Year to all the 🐱
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Nastassia Patin @microbesatsea.bsky.social · 17/12/2025
In 2023 I participated in a hackathon run by NCAR and NVIDIA. Everyone else was working on climate and weather models, we were the only bioinformatics team but it was an incredible opportunity to learn about the utility of GPU-based computing for science. 1/2
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Gretchen Goldman, PhD @gretchentg.bsky.social · 17/12/2025
And whether or not you are at #AGU25, you can join us in speaking out against moves by the Trump administration to dismantle @ncar-ucar.bsky.social, the premier weather and climate research center for the nation. secure.ucs.org/a/2025-prote...
secure.ucs.org
Protect the National Center on Atmospheric Research
Write today and urge your members of Congress to oppose the Trump administration's plans to dismantle the National Center for Atmospheric Research (NCAR.) Your message to Congress will help protect NC...
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Ilhan Omar @ilhanmn.bsky.social · 10/12/2025
Trump’s obsession with me is beyond weird. He needs serious help. Since he has no economic policies to tout, he’s resorting to regurgitating bigoted lies instead. He continues to be a national embarrassment.
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Raven Onthill @ravenonthill.bsky.social · 06/12/2025
@hcrichardson.bsky.social like anti vax for renewable energy.
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Petra Pjevac @ppjevac.bsky.social · 28/11/2025
This nice summary by @michiwagner4.bsky.social makes it easy to fit my post in a few characters. Amplicon sequencing is still an affordable and quick way to get good insights into who lives in your samples. Our new primers make sure your vision is 20/20. Try em, and contact me if you have questions!
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Prof Alessandro Tagliabue @altagliabue.bsky.social · 29/10/2025
Seeking a three year postdoc in the field of ocean biogeochemistry and productivity using mechanistic models and synthesis of observations. Note the short fuse for applications. Please help distribute. All nationalities welcome to apply! 🌊 www.jobs.ac.uk/job/DPG117/p...
jobs.ac.uk
Postdoctoral Research Associate at University of Liverpool
Looking for a new job opportunity in academia? Check out this job opening for a Postdoctoral Research Associate on jobs.ac.uk!
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David Ho @davidho.bsky.social · 27/10/2025
Russia has kidnapped a 70-year-old Ukrainian marine biologist, Leonid Pshenichnov, for backing a curb on Antarctic krill fishing, saying that it would harm the economic interests of Russia.
theguardian.com
Russia arrests Ukrainian biologist for backing curbs on Antarctic krill fishing
‘Trumped-up’ charges spark diplomatic row as scientists express fears for health of 70-year-old Leonid Pshenichnov
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Jeremy Hsu @jeremyhsu.bsky.social · 26/10/2025
NOAA hurricane hunters flying aboard a P-3 Orion aircraft ("Kermit") are monitoring Hurricane Melissa as most aircraft steer clear. The storm poses a catastrophic threat to Jamaica and Haiti. The crew are among the many federal workers working without pay during the US government shutdown.
A map image from the Flight Radar 24 service shows the flight track of a NOAA P-3 Orion aircraft flying over the Caribbean Sea, where Hurricane Melissa threatens to bring catastrophic rain and flooding to Jamaica and Haiti. Most other aircraft appear to be steering clear of the area.
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Nastassia Patin @microbesatsea.bsky.social · 21/10/2025
10/10 background slide for the CA state agency lightning talks today at the West Coast Marine Research Workshop
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Nastassia Patin @microbesatsea.bsky.social · 15/10/2025
My PhD advisor explaining how devastating proposed cuts are / will be (insider tip: he hates diving in cold water and must have thought it was a really important cause to do it here!): www.nbcnews.com/now/video/fe... @scrippsocean.bsky.social
nbcnews.com
Federal funding cuts impact scientific research in the ocean
A team of researchers from the Scripps Institution of Oceanography at the University of California, San Diego, are working to explore the bottom of the ocean in an effort to discover scientific breakt...
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Nastassia Patin @microbesatsea.bsky.social · 10/10/2025
@ucsandiego.bsky.social @uofcalifornia.bsky.social please take note, this is how you can show courage and integrity.
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David Ho @davidho.bsky.social · 29/09/2025
The Department of Energy has added these terms to its growing “list of words to avoid” because words are dangerous: climate change green decarbonization emissions energy transition sustainability sustainable clean energy dirty energy carbon footprint CO₂ footprint tax breaks tax credits subsidies
politico.com
Energy Dept. adds ‘climate change’ and ‘emissions’ to banned words list
It is the latest in a series of Trump administration efforts to dispute, silence or downplay climate change.
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Mike Dettinger @mdettinger.bsky.social · 20/09/2025
EPA has ordered scientists in its Office of Water to immediately pause almost all research & stop publishing studies. Researchers were told that, unless scientific journals had already returned proofs, studies will be subject to an additional EPA review. www.washingtonpost.com/climate-envi...
washingtonpost.com
EPA tells scientists to stop publishing studies, employees say
Staff from the EPA’s Office of Water were summoned to a town hall meeting this week and told to pause the publication of most research, pending a review.
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Karen Attiah @karenattiah.bsky.social · 15/09/2025
Some personal news: I've been fired from the Washington Post in the aftermath of the Charlie Kirk shooting. Thread incoming. substack.com/@karenattiah...
substack.com
The Washington Post Fired Me — But My Voice Will Not Be Silenced.
I spoke out against hatred and violence in America — and it cost me my job.
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Scripps Institution of Oceanography @scrippsocean.bsky.social · 11/09/2025
Congress is considering a budget request that proposes slashing the federal science agencies by up to 50%. These cuts would devastate @UCSanDiego & Scripps Oceanography by cutting off funding for critical research and innovation. Tell Congress to invest in science! #SpeakUp4Science
universityofcalifornia.quorum.us
Speak Up for Science
U.S. innovation and global leadership is at risk.
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lukethompsonphd.bsky.social @lukethompsonphd.bsky.social · 08/09/2025
My group at NOAA/Miami is hiring a postdoc to lead a marine eDNA biodiversity effort (Bio-GO-SHIP). You'll develop and deploy high-throughput metabarcoding assays for ocean DNA. Help make foundational contributions to global marine biodiversity monitoring! t.co/p53s7E0YiL
t.co
https://explore.msujobs.msstate.edu/cw/en-us/job/509519
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Nastassia Patin @microbesatsea.bsky.social · 04/09/2025
How are we not talking more about his history of abusing women to the point where his former wife committed suicide? Everyone should read “Ask Not: The Kennedy Men and the Women they Destroyed” to learn more.
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Raider @iwillnotbesilenced.bsky.social · 28/08/2025
National Guard doing landscaping in McPherson Square. Washington, DC
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Nastassia Patin @microbesatsea.bsky.social · 28/08/2025
In this increasingly dark time, find some empathy with the permanent dwellers of the deep, beautifully portrayed in this @npr.org comic with the help of my wonderful @noaa.gov colleague Noelle Bowlin! www.npr.org/2025/07/21/g...
npr.org
COMIC: Exploring the ocean's wonderous, mysterious depths
Scientists are far from knowing all of the complexities of Earth's ocean. With this comic, we explore some of what scientists do know, like its role as one of the world's largest carbon sinks and how ...
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Mark Zaid, Esq @markzaidesq.bsky.social · 28/08/2025
Abbe Lowell and I represent CDC Director #SusanMonarez. Contrary to govt statements, Dr. Monarez has neither resigned nor yet been fired. She will not resign. We have issued the following statement:
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Jordan Meier @doc-jlmeier.bsky.social · 27/08/2025
This piece by @clauswilke.com on LLMs as the graduate student from hell is one of the funniest (and truest) things I've read this year. substack.com/home/post/p-...
substack.com
PhD-level intelligence or the graduate student from hell
AI companies love to tout that their models are approaching—or have reached—PhD-level intelligence. This is blatant nonsensical marketing geared towards an audience that deeply misunderstands what a P...
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Joey Bernhardt @joeybernhardt.bsky.social · 14/08/2025
Please help us spread the word! Please amplify! We are searching for an associate or full professor (Canada Excellence Research Chair) in Biodiversity Genomics at the University of Guelph! 🐟🌿🦠🐜🐸🐝 Applications are due October 6 2025. careers.uoguelph.ca/job/Guelph-C... #AcademicJobs #EvoBio
careers.uoguelph.ca
Canada Excellence Research Chair in Biodiversity Genomics
Canada Excellence Research Chair in Biodiversity Genomics
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Will Ratcliff @wcratcliff.bsky.social · 12/08/2025
Not sure how many scientists here have tried Claude Code or similar command line coding assistants. I had a complicated family property tax problem that was best solved by a brute force Monte Carlo simulation approach, so I spent a few days coding up and analyzing a model with Claude Code.
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Matt Lemay @littorina.bsky.social · 07/08/2025
New Paper: We linked DNA in sediment cores with historical accounts from Indigenous community members to reconstruct ecosystem changes that occurred following a landslide event in the 1940s. onlinelibrary.wiley.com/doi/full/10....
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Nastassia Patin @microbesatsea.bsky.social · 29/07/2025
Proud to be part of this paper discussing the all the benefits of oceangoing vessels for advancing research, not only in oceanography but biology, climate science, and so many other fields! doi.org/10.1002/lno....
doi.org
The essential role of large research vessels in marine ecosystem observations and ocean sustainability
Our understanding of marine ecosystems and ability to manage them sustainably has come from multidisciplinary observations made repeatedly over long periods of time. These long-term ecosystem observa...
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Natalie Wright, Ph.D. @coereba.bsky.social · 25/07/2025
Kenyon is hiring a TT microbiologist! Please share widely. I’m the search chair & am happy to answer any questions. careers.pageuppeople.com/695/cw/en-us...
careers.pageuppeople.com
Kenyon College - Details - Assistant Professor of Biology (Tenure-Track)
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Woods Hole Oceanographic Institution @whoi.edu · 22/07/2025
🤔How does defunding #oceanscience jeopardize US ntl security? Hear from #WHOI's @pdemenocal.bsky.social, @scrippsocean.bsky.social Dir. Margaret Leinen + Ret. Admiral John Richardson in @washingtonpost.com: go.whoi.edu/ocean-science-national-security #TogetherforScience @savensf.bsky.social
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Nandita Garud @nanditagarud.bsky.social · 22/07/2025
I am seeking a postdoc for my group at UCLA. We work at the intersection of population genetics x microbiome (garud.eeb.ucla.edu). If interested, please message me!
garud.eeb.ucla.edu
Garud Lab
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Nastassia Patin @microbesatsea.bsky.social · 17/07/2025
Excited to share my new study comparing shotgun metagenomes with metabarcoding for detecting eukaryotes in the ocean! Out today in @mbmg.pensoft.net mbmg.pensoft.net/article/1449...
mbmg.pensoft.net
Markers or metagenomes: sequencing marine eukaryotic DNA for better biodiversity surveys
Marker gene sequencing (“metabarcoding”) is the primary sequencing approach currently used for molecular biodiversity surveys, but this approach is taxonomically limited and hampered by amplification ...
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Laura Poppick @laurapoppick.bsky.social · 11/07/2025
"Numbers released in May by the National Science Foundation (NSF) indicate that...the number of early-career researchers it supports could fall by 78%...'It’s a nightmare,' Simon says. 'I really fear for the future of science.'" @science.org www.science.org/content/arti...
science.org
‘It’s a nightmare.’ U.S. funding cuts threaten academic science jobs at all levels
“There is a lot of pressure to essentially leave the country or not pursue research,” one Ph.D. student says
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NRDC @nrdc.org · 01/07/2025
Senate Republicans just passed the worst environmental law in U.S. history. Oil CEOs will start cracking open the champagne on their yachts. The rest of us will have higher prices, fewer jobs, more heat waves, and worse climate disasters. Here are the details ➡️
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ProPublica @propublica.org · 01/07/2025
The total loss of NOAA’s office of Oceanic and Atmospheric Research —a nerve center of global climate science, data collection and modeling — represents a setback for climate preparedness that experts warn the nation may never recover from. (Published April)
propublica.org
Trump’s NOAA Budget Cuts Could Gut Critical Climate Modeling
Potential funding cuts for NOAA and its research partners threaten irreparable harm not only to climate research but to American safety, competitiveness, and national security.
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David Ho @davidho.bsky.social · 23/06/2025
I was having lunch with an NSF program manager when her cell phone lit up, all with messages about the overhead rate. We won! The United States District Court for the District of Massachusetts said NSF can't reduce the overhead rate to 15% for universities! 🥳 cases.justia.com/federal/dist...
2. The National Science Foundation's 15% Indirect Cost Rate and the Policy Notice:
Implementation of Standard 15% Indirect Cost Rate, NSF 25-034 are VACATED.
3. The court DECLARES that the National Science Foundation's 15% Indirect Cost
Rate and the Policy Notice: Implementation of Standard 15% Indirect Cost Rate, NSF 25-034 are invalid, arbitrary and capricious, and contrary to law.
IT IS SO ORDERED.
June 20, 2025
/s/Indira Talwani
United States District Judge
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Britt Lundgren @brittlundgren.bsky.social · 29/05/2025
Are you a PI of a federal grant cancelled by the Trump administration? Please share your info with the Democratic Staff of the House Committee on Science, Space, and Technology, who launched this portal yesterday to track funding cancellations 🔭🧪 forms.office.com/pages/respon...
Grant Cancellation Web Form

WAS YOUR GRANT CANCELED BY PRESIDENT TRUMP?

The Committee on Science, Space, and Technology, Democratic Staff, is surveying the impact of the Trump Administration’s cancelation of federal research awards. If your award was terminated since January 20, 2025, please fill out this brief survey. If you had multiple awards terminated, please fill out a separate form for each award. While anonymous submissions will be helpful to the Committee’s efforts, we encourage you to leave your contact information if you are open to having a confidential conversation with Committee staff. Please find our confidentiality policies at the following link – any information you share will be treated with these protections, regardless of your current affiliation with any current or former funding agency: https://democrats-science.house.gov/contact/whistleblower
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Nastassia Patin @microbesatsea.bsky.social · 11/05/2025
Brutally accurate description of the destruction NOAA, and what it means for US science and the environment . www.theguardian.com/us-news/2025...
theguardian.com
Trump administration has set Noaa on ‘non-science trajectory’, workers warn
Researchers left at US climate agency say drastic cuts could leave air ‘not breathable’ and water ‘not drinkable’
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Jacquelyn Gill @jacquelyngill.bsky.social · 09/05/2025
This is an absolute disaster. If we don't stop this, they will turn NSF into a pawn of the Trump administration. There will be no research on climate, biodiversity, or anything that isn't eugenics or AI or how to more efficiently destroy the planet for profit. This cannot be allowed to happen.
science.org
Exclusive: NSF faces radical shake-up as officials abolish its 37 divisions
Changes seen as a response to presidential directives on what research to fund
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