iiinova — where your digital self keeps evolving

Reposted by The Matrisome Project

Naba Lab UIC @nabalabuic.bsky.social · 21/09/2026

📣 Hot off the press: our review, “Understanding and targeting the tumour matrisome,” is now published in @natrevclinonc.nature.com! 🔗 doi.org/10.1038/s415... #ExtracellularMatrix #Matrisome #Matrisomics #Matritherapies #HallmarksOfCancer #TumorMicroenvironment

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Yasset Perez-Riverol @ypriverol.bsky.social · 04/05/2026

If you are annotating SDRFs from public proteomics data or your own submission, and you have access to #Claude; #gemini #OpenAI #Codex or ClaudeCode, you can use #SDRF-skills; really simple github.com/bigbio/sdrf-...

github.com

GitHub - bigbio/sdrf-skills: Agentic plugins to annotate SDRF using Claude; Codex; Cursor; Gemini

Agentic plugins to annotate SDRF using Claude; Codex; Cursor; Gemini - bigbio/sdrf-skills

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The Matrisome Project @matrisome.bsky.social · 30/04/2026

Excited to launch #MatriSpace: a framework for mining #SpatialTranscriptomic data with a focus on matrisome genes co-developed with @valerioizzi.bsky.social 🔗 @biorxivpreprint.bsky.social: doi.org/10.64898/202... 🔗 ShinyApp: matrinet.shinyapps.io/matrispace/ #ECM #Matrisome #MatriTool #OpenAccess

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The Matrisome Project @matrisome.bsky.social · 28/04/2026

Our newly redesigned #Matrisome Portal is now live: matrisome.org. Built to meet #ADA standards, the new site improves accessibility, usability, and overall experience for all. Take a look and let us know what you think! #Accessibility #ADACompliance

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Naba Lab UIC @nabalabuic.bsky.social · 25/11/2025

📣 Publication alert: Our paper, “A guide to building the matrisome interactome: from computational predictions to experimental validation” is now published in @febsj.bsky.social! 📄 The paper is available in #OpenAccess at: doi.org/10.1111/febs... #ECM #Matrisome #Interactome #SystemsBiology

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Reposted by The Matrisome Project

Naba Lab UIC @nabalabuic.bsky.social · 15/07/2025

Data drop! We just released an updated list of anti-ECM antibodies curated from the #HumanBioMolecularAtlasProgram Organ Mapping Antibody Panels #OMAP and the 9th release of the Human Reference Atlas #HRA. Check it out: sites.google.com/uic.edu/matr...

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Reposted by The Matrisome Project

Journal of Cell Science @jcellsci.bsky.social · 16/07/2025

Rijuta Lamba, Alexandra Naba @nabalabuic.bsky.social, @valerioizzi.bsky.social and team present MatriCom, a single-cell RNA-sequencing data mining tool to infer cell–ECM interactions. Highlight: journals.biologists.com/jcs/article/... Article: journals.biologists.com/jcs/article/... #OpenAccess

Figure showing the building MatriComDB, an omnibus database of matrisome protein interactions.

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Reposted by The Matrisome Project

Martin Humphries @martinhumphries.bsky.social · 08/05/2025

Congratulations to Pat Caswell (@integrintraffic.bsky.social) & Alexandra Naba (@matrisome.bsky.social) who will be vice-chairs of the 2027 Fibronectin, Integrins & Related Molecules GRC and chairs of the 2029 meeting!

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Reposted by The Matrisome Project

Naba Lab UIC @nabalabuic.bsky.social · 17/12/2024

Our manuscript describing #MatriCom, a web application we developed in collaboration with @valerioizzi.bsky.social to infer #ECM communication systems from #scRNASeq datasets is now available on @biorxivpreprint.bsky.social!

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Reposted by The Matrisome Project

bioRxivpreprint @biorxivpreprint.bsky.social · 17/12/2024

MatriCom: a scRNA-Seq data mining tool to infer ECM-ECM and cell-ECM communication systems www.biorxiv.org/content/10.1101/202…

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