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Sebastian Lequime

@lequimelab.eu
202 followers 174 following 14 posts

Associate prof @gelifes.bsky.social @rug.nl | virus ecology and evolution | arboviruses | arthropods | epidemiology 🇫🇷 in 🇳🇱 Data editor at the Journal of Evolutionary Biology lequimelab.eu

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Reposted by Sebastian Lequime
Katy Brown @thekatybrown.bsky.social · 07/08/2026
Me, @emma-harding.bsky.social, @rtarlinton.bsky.social and @royalsociety.org are organising a meeting on endogenous viral elements! 8-9 Feb 2027, Birmingham UK. 2 whole days of EVEs! Many amazing researchers already agreed to speak. Invites: shorturl.at/jp9sh Provisional schedule: shorturl.at/8O5KV
royalsociety.org
Endogenous viral elements | Royal Society
Theo Murphy meeting organised by Dr Katy Brown, Dr Emma Harding and Professor Rachael Tarlinton
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Reposted by Sebastian Lequime
The Lambrechts Lab @lambrechtslab.bsky.social · 23/04/2026
🚨 We're hiring! A #postdoc position is available @lambrechtslab.bsky.social @pasteur.fr ➡️ Come join our team to investigate the #genomic variations underlying the adaptive potential and vectorial capacity of Aedes aegypti #mosquitoes 🦟 More details at this link: research.pasteur.fr/b/1Cov
research.pasteur.fr
Postdoctoral position in mosquito population genomics at Institut Pasteur in Paris - Research
The Insect-Virus Interactions Unit is looking for a postdoctoral researcher to investigate the genomic variations underlying a mosquito’s capacity to transmit human arboviruses. Description Our resear...
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Reposted by Sebastian Lequime
Gytis Dudas @evogytis.bsky.social · 22/04/2026
Please share! My lab has an open fully-funded PhD position at Vilnius University's Life Sciences Center in Lithuania. The PhD project will involve identifying missing orthomyxovirus segments from public sequence data. Applicants must hold an MSc by June & have bioinformatics experience. 1/2
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The Lambrechts Lab @lambrechtslab.bsky.social · 15/04/2026
🚨 A #postdoc position is available @lambrechtslab.bsky.social @pasteur.fr ➡️ Come join our team to investigate the #genomic variations underlying the adaptive potential and vectorial capacity of Aedes aegypti #mosquitoes 🦟 More details at this link: research.pasteur.fr/b/1Cov
research.pasteur.fr
Postdoctoral position in mosquito population genomics at Institut Pasteur in Paris - Research
The Insect-Virus Interactions Unit is looking for a postdoctoral researcher to investigate the genomic variations underlying a mosquito’s capacity to transmit human arboviruses. Description Our resear...
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Reposted by Sebastian Lequime
Ella Sieradzki @sieravirus.bsky.social · 09/04/2026
Deadline is April 20th! Let’s get those viruses
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Reposted by Sebastian Lequime
Joel Pick @joelpick.bsky.social · 19/03/2026
I'm excited to announce that the @sortee.bsky.social Guidelines for Data and Code Quality Control in Ecology and Evolutionary Biology are now published in Peer Community Journal peercommunityjournal.org/articles/10....
peercommunityjournal.org
The SORTEE guidelines for data and code quality control in ecology and evolutionary biology
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Reposted by Sebastian Lequime
Journal of Evolutionary Biology @jevbio.bsky.social · 23/10/2025
Have you recently read about a particular field in depth? Perhaps you have just finished your PhD thesis? @jevbio.bsky.social is seeking Review Articles! Find out more about Reviews and Target Reviews at JEB here: academic.oup.com/jeb/pages/re...
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E. Yağmur Erten @yagmurerten.bsky.social · 23/10/2025
Applications for the MEME programme (www.evobio.eu ) are now open! MEME is a research- and mobility-oriented master’s in evolutionary biology (& I’m a proud alumna!), jointly run by the Unis of Groningen, Uppsala, Montpellier, and LMU Munich, with Harvard and Lausanne as partners. Spread the word!
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Ben Longdon @blongdon.bsky.social · 25/09/2025
2 job adverts on a NERC project w myself + @darrenobbard.bsky.social on “What determines the virome: ecology and the environment, evolution, or species history?” early 2026 in @uniexecec.bsky.social - Postdoc: jobs.exeter.ac.uk/hrpr_webrecr... - RA: jobs.exeter.ac.uk/hrpr_webrecr... Pls share!
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Chantal Vogels @chantalvogels.bsky.social · 19/09/2025
📢New preprint on the impact of dengue virus genetic diversity on inhibition by Wolbachia 🦟🦠🧬 Project led by Afeez Sodeinde, @emiliefinch.bsky.social, and @keli5734.bsky.social! ✨ Key findings in thread below 👇 www.biorxiv.org/content/10.1...
biorxiv.org
Heterogeneity in inhibition of genetically diverse dengue virus strains by Wolbachia
The release of Aedes aegypti mosquitoes transinfected with the virus-inhibiting Wolbachia bacterium has the potential to reduce the burden caused by dengue virus (DENV). However, the robustness of thi...
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Joel Pick @joelpick.bsky.social · 15/08/2025
🚨Introducing the @sortee.bsky.social Guidelines for Data and Code Quality Control in Ecology and Evolutionary Biology🚨 doi.org/10.32942/X24... Increasingly E&E journals are recruiting data editors. We provide standardised guidelines for journals with data editors and those wanting to recruit them 🧵
doi.org
The SORTEE Guidelines for Data and Code Quality Control in Ecology and Evolutionary Biology
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Reposted by Sebastian Lequime
Cassandra Koh 🦟🔬🧪 @cassandrakoh.bsky.social · 28/07/2025
📣 I'm recruiting a postdoc researcher to join my team for a project on mosquito-specific viruses and host interactions. Peep the job description & how to apply below. Perfect for soon-to-be or recent PhD graduates in mosquito vector biology 🦟 or arbovirology 🦠 🗓️ Application deadline 31 August 2025
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Sebastian Lequime @lequimelab.eu · 19/06/2025
Very happy to have had time to sit with Gemma Venhuizen from NRC to chat about viruses! (if you are a Dutch speaker) www.nrc.nl/nieuws/2025/...
nrc.nl
Virussen zijn geniaal, maar er zitten natuurlijk ook bad guys tussen
Sebastian Lequime | viroloog: Sommige virussen besmetten mensen na een beet van een mug of een teek. „Jezelf repliceren in een mug én een mens? Dat is, als je erover nadenkt, mindblowing.”
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Reposted by Sebastian Lequime
Katy Brown @thekatybrown.bsky.social · 27/05/2025
I'm thinking of organising a meeting on endogenous viral elements (RNA, DNA and retroviral) - if you'd potentially be interested, please fill out the form here - forms.gle/wrCiWMw4yXZe... - so I can gauge interest. Please RT or share with anyone maybe interested! 🧪🧬🖥️🦠 #virology #bioinformatics
forms.gle
EVE Meeting Expression of Interest
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Sebastian Lequime @lequimelab.eu · 20/05/2025
It all starts with an ‘how it should be easy enough right’ on a Friday evening drink with colleagues. About two years later we finally have a genome, but it wasn’t as easy as thought (it never is, right?). Happy to see the preprint out!
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Marion Koopmans @marionkoopmans.bsky.social · 04/04/2025
Please share with people interested in arbovirology. We are looking for an enthusiastic colleague to strengthen our team please share if you know of scientists interested in arbovirology, ready to make a move to Rotterdam! www.academictransfer.com/en/jobs/3508...
academictransfer.com
Assistant professor Arbovirology
We are looking for a passionate researcher interested in basic arbovirology to join our team!
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Gytis Dudas @evogytis.bsky.social · 03/04/2025
We're looking for a PhD student to join us at Vilnius University in Lithuania. We work on RNA virus evolution computationally but we'd like to generate more mosquito RNA virus sequence data. Official ad: www.gmc.vu.lt/en/doctoral-.... Please share & continue reading if interested.
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Simon Dellicour @sdellicour.bsky.social · 28/03/2025
Check out our latest study "Comparative performance of novel viral landscape phylogeography approaches", which is now available as a preprint on bioRxiv: www.biorxiv.org/content/10.1.... @ulbruxelles.bsky.social @ulbrecherche.bsky.social - 1/8
biorxiv.org
Comparative performance of novel viral landscape phylogeography approaches
The fast rate of evolution in RNA viruses implies that their evolutionary and ecological processes occur on the same time scale. Genome sequences of these pathogens can therefore contain information a...
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Sebastian Lequime @lequimelab.eu · 12/02/2025
Very happy to see our Endogenous Viral Element workflow detectEVE published today in Molecular Ecology Resources. Open for all to read, and use of course! Led by @nbrait.bsky.social doi.org/10.1111/1755...
doi.org
detectEVE: Fast, Sensitive and Precise Detection of Endogenous Viral Elements in Genomic Data
Endogenous viral elements (EVEs) are fragments of viral genomic material embedded within the host genome. Retroviruses contribute to the majority of EVEs because of their genomic integration during t....
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Reposted by Sebastian Lequime
Lucie Etienne @lucievirevolte.bsky.social · 07/02/2025
We are looking for a #postdoc to discover cell-autonomous innate immune antiviral factors in mammals, based on newly-identified defense of prokaryotes! #EvoCure #comparativeImmunology #virology Please share @inserm.fr @ciri-lyon.bsky.social @cnrsbiologie.bsky.social ciri.ens-lyon.fr/teams/lp2l/j...
ciri.ens-lyon.fr
Postdoc position in comparative immunology and virology — Centre International de Recherche en Infectiologie
A 1-year renewable postdoctoral researcher position is available in our lab (PI: Lucie ETIENNE, CIRI, ENS-Lyon) to discover new antiviral cell-autonomous innate immune factors in mammals, based on new...
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Jayna Raghwani @jraghwani.bsky.social · 31/01/2025
Just over week until the deadline👇
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Entomological Society of America @entsocamerica.bsky.social · 24/01/2025
A new research review examines how carrying dengue virus affects Aedes aegypti mosquitoes' life cycle and behavior and whether the virus manipulates its mosquito host—or if changes are byproducts of other factors.
entomologytoday.org
Dengue Virus Effects on Aedes aegypti Mosquitoes: Genetic Manipulation or Byproduct?
A new research review examines how carrying dengue virus affects Aedes aegypti mosquitoes' life cycle and behavior and whether the virus manipulates its mosquito host—or if changes are byproducts of…
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Reposted by Sebastian Lequime
E. Yağmur Erten @yagmurerten.bsky.social · 09/01/2025
Applications for MEME are open! It's a research- and mobility-oriented Evolutionary Biology Master's Programme, where students have the opportunity to visit 4(+2) different universities in two years. Please spread the word! www.evobio.eu #EvoBio
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fischerlab.bsky.social @fischerlab.bsky.social · 09/12/2024
Looking for a postdoc in environmental virology? Fascinated by giant viruses and their glycobiology? We have a position available at the MPI for Marine Microbiology! @mpimarinemicrobio.bsky.social @maxplanck.de career.mpi-bremen.de/jobposting/8...
career.mpi-bremen.de
Post-Doc Protist Viruses
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Sebastian Lequime @lequimelab.eu · 19/12/2024
Happy to see @nbrait.bsky.social and Muriel Ritsch-led paper on data accessibility and availability of endogenous viral elements (EVEs) published in Virus Evolution doi.org/10.1093/ve/v... I really think this is holding back EVE research at the moment: is it easy to solve?
doi.org
Endogenous viral elements: insights into data availability and accessibility
Abstract. Endogenous viral elements (EVEs) are remnants of viral genetic material endogenized into the host genome. They have, in the last decades, attract
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Reposted by Sebastian Lequime
Max Reuter @maxreuter.bsky.social · 16/12/2024
We are looking for new editors at @jevbio.bsky.social! If you would like to get involved in publishing and support your society and its journal, then please apply. The deadline is January 20. We will aim for a quick turn-around for a start in early 2025. Further information via the post below:
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sarah-c-hill.bsky.social @sarah-c-hill.bsky.social · 18/12/2024
🦠 We are recruiting two 2-year postdocs to work at the intersection of virus genomics and infectious disease. jobs.rvc.ac.uk/vacancy.aspx... Please share widely!
An image with text describing the jobs, and the logo of the Royal Veterinary College. The text says:

Title: Hiring two postdoctoral researchers. 

What? Improve identification and response to emerging and endemic virus threats.
Where? Royal Veterinary College.
How? Genomics, metagenomics, phylogenetics.
Who: Working with Prof Oliver Pybus, Dr Sarah Hill, Dr Jayna Rahgwani, and GAP DC. 
When? Apply by 27th January 2025. 

Underneath this, there are two boxes describing the two roles:
Role 1: Phylodynamics: Introduction, emergence and spread of viruses in farmed and wild animals. 
Role 2: Detect and understand threats to/from wildlife and their environments.
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Pedro Vale @pfvale.bsky.social · 11/12/2024
"What makes a super-spreader? Unravelling the genetics of host infectiousness" Funded #PhD position in my lab exploring the drivers of host heterogeneity in pathogen transmission. Get in touch if interested. Deadline 17 Jan 2025. #HostPathogen #DiseaseEcology www.findaphd.com/phds/project...
findaphd.com
EastBio: What makes a super-spreader? Unravelling the genetics of host infectiousness. at University of Edinburgh on FindAPhD.com
PhD Project - EastBio: What makes a super-spreader? Unravelling the genetics of host infectiousness. at University of Edinburgh, listed on FindAPhD.com
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Journal of Evolutionary Biology @jevbio.bsky.social · 10/12/2024
Opportunity! We are looking for new editors - application deadline is Monday 20th January. Positions available: Associate Editors Handling Editor Commissioning Editor Details here: jevbio.net/call-for-edi...
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Sebastian Lequime @lequimelab.eu · 19/11/2024
Guess it's finally time to move on; here I am! Some Endogenous viral elements/RNA virus evolution/ecology in arthropods are to come (hopefully) soon! 🦠
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