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Kamil Hupało

@kamilhupalo.bsky.social
195 followers 230 following 12 posts

Postdoctoral researcher @ University of Duisburg-Essen | #eDNA #parasites #freshwater @impact-parasites.bsky.social | Studying biodiversity & ecology with #DNA

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Reposted by Kamil Hupało
Jonathan Tonkin @jdtonkin.bsky.social · 29/05/2025
If you think the seasons are feeling… different, you may be right. Our new review in Science (@science.org) shows that Earth’s changing rhythms could have major and underestimated consequences for life on Earth. 🌍🧵 www.science.org/doi/10.1126/...
science.org
Ecological and evolutionary consequences of changing seasonality
Climate change and other anthropogenic drivers alter seasonal regimes across freshwater, terrestrial, and marine biomes. Seasonal patterns affect ecological and evolutionary processes at different eco...
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Kamil Hupało @kamilhupalo.bsky.social · 20/05/2025
🚨 Thrilled and honoured to lead the chapter on using #eDNA for studying aquatic #parasites - a part of just-published book on #openaccess Aquatic Parasitology led by @berndsures.bsky.social & @nicojsmit.bsky.social with top parasitologists contributing! link.springer.com/book/10.1007... More ⬇️🧵
link.springer.com
Aquatic Parasitology: Ecological and Environmental Concepts and Implications of Marine and Freshwater Parasites
A unique open access collection on ecological and environmental parasitology in marine and freshwater. Covers climate change and parasite conservation.
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Reposted by Kamil Hupało
Rudolf Meier @rudolf-meier.bsky.social · 14/03/2025
🚨 EntoSieve is now published in Molecular Ecology Resources: Fast and accurate size-sorting of bulk insect samples! Perfect for boosting DNA megabarcoding & metabarcoding projects. 🧬🔬 DIY low-cost device, gentle on specimens and yet efficient 🦋🐞 here: onlinelibrary.wiley.com/doi/full/10....
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Reposted by Kamil Hupało
Juan A. Balbuena @jabalbuena.bsky.social · 06/05/2025
Considering a scientific career in Spain? Grants to Encourage the Incorporation of Established Talent 'ATRAE Program' 2025 www.aei.gob.es/en/announcem...
aei.gob.es
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Allan McDevitt @shrewgod.bsky.social · 05/05/2025
A very up-to-date review led by the brilliant @hollybroadhurst.bsky.social on the applications of #eDNA and iDNA for monitoring terrestrial and semi-aquatic mammals! The beginnings, the milestones, where we're heading. Water, soil, air, the inverts, all here! onlinelibrary.wiley.com/doi/abs/10.1...
onlinelibrary.wiley.com
From Water to Land: A Review on the Applications of Environmental DNA and Invertebrate‐Derived DNA for Monitoring Terrestrial and Semi‐Aquatic Mammals
This review explores global applications of environmental DNA (eDNA) and invertebrate-derived DNA (iDNA) for surveying terrestrial and semi-aquatic mammals. By providing a comprehensive overview of t...
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Reposted by Kamil Hupało
Jonathan Tonkin @jdtonkin.bsky.social · 29/04/2025
What I wish I knew: 33 thoughts for early career researchers Reflections I wish someone had shared with me early in my research career. predirections.substack.com/p/what-i-wis...
predirections.substack.com
What I wish I knew: 33 thoughts for early career researchers
Thirty three reflections I wish someone had shared with me early in my research career.
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Reposted by Kamil Hupało
Bettina Thalinger @bettinathal.bsky.social · 29/04/2025
#eDNA #eRNA #omics people: would you support the formation of a European Society for Environmental Omics #ESEO? Please share your thoughts in the questionnaire & spread this message! 🙏 Thank you, the ESEO core team! docs.google.com/forms/d/e/1F...
docs.google.com
European Society for Environmental Omics (ESEO)
Dear Environmental Omics enthusiasts! At the AquaEcOmics meeting in Evian (March, 2025), an international group of 35 experts discussed the future of regular European meetings and collaborative effor...
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Reposted by Kamil Hupało
Bettina Thalinger @bettinathal.bsky.social · 19/03/2025
Lake Geneva #eDNA sample taken! 🥳 Including a demo of @alpineedna.bsky.social‘s new sampling kit! @florianaltermatt.bsky.social @kamilhupalo.bsky.social @leeselab.bsky.social @grace-kotnik.bsky.social @tiinalaamanen.bsky.social @francoiskeck.bsky.social @aquaecomics.mastodon.social.ap.brid.gy
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Kamil Hupało @kamilhupalo.bsky.social · 18/03/2025
Very happy to be at @aquaecomics.mastodon.social.ap.brid.gy conference! So many great studies showcasing innovations in DNA-based biodiversity studies! Great to be among innovators & presenting our (e)DNA-based approach for fish parasites @impact-parasites.bsky.social including the fish smoothies!
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Kamil Hupało @kamilhupalo.bsky.social · 17/03/2025
My first contribution to aquatic parasitology! 🤓🙌 We propose a new method using fish smoothies for DNA-based ID & detection of fish parasites 🤯🐟🦠 still room for improvement, but the method is highly comparable with morphological ID; 🔜 #metabarcoding ➡️Check out the preprint: doi.org/10.21203/rs....
doi.org
A new method for rapid detection and identification of fish parasites through whole-fish homogenization
Background: The global biodiversity crisis, driven by anthropogenic activities, signals the onset of the sixth mass extinction in Earth’s history. The biodiversity decline is particularly evident in f...
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Reposted by Kamil Hupało
Dr Angel Borja @drangelborja.bsky.social · 17/02/2025
What are the best #artificialintelligence tools for #research? Nature’s guide www.nature.com/articles/d41...
nature.com
What are the best AI tools for research? Nature’s guide
There are many large language models to choose from; some excel at coding, whereas others are better for synthesizing information.
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Reposted by Kamil Hupało
Daniel Hering @danielheringude.bsky.social · 13/02/2025
Another position in @crc-resist.bsky.social, a postdoc position based in Senckenberg (Gelnhausen). If you are interested in large-scale data analysis, this position will boost your career. You will work in a very successful lab that publishes many high-ranking papers every year.
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Reposted by Kamil Hupało
Reindert Nijland @reindertn.bsky.social · 11/02/2025
Super happy our paper on #eDNA #metabarcoding of North Sea fish using @nanoporetech.com sequencing is finally published in Molecular Ecology Resources: onlinelibrary.wiley.com/doi/10.1111/...
onlinelibrary.wiley.com
The Long and the Short of It: Nanopore‐Based eDNA Metabarcoding of Marine Vertebrates Works; Sensitivity and Species‐Level Assignment Depend on Amplicon Lengths
To monitor the effect of nature restoration projects in North Sea ecosystems, accurate and intensive biodiversity assessments are vital. DNA-based techniques and especially environmental (e)DNA metab....
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Reposted by Kamil Hupało
Dominik Buchner @dominikbuchner.bsky.social · 06/01/2023
Just released version 1.6.0 of the APSCALE pipeline. This update includes improved log writing and added failsafe features for better handling of invalid settings. Check it out on GitHub:#apscale #metabarcoding #pipeline github.com/DominikBuchner…
github.com
GitHub - DominikBuchner/apscale: Advanced Pipeline for Simple yet Comprehensive AnaLysEs of DNA metabarcoding data
Advanced Pipeline for Simple yet Comprehensive AnaLysEs of DNA metabarcoding data - DominikBuchner/apscale
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Reposted by Kamil Hupało
Catherine Grueber @cegrueber.bsky.social · 29/01/2025
Out now in @nature.com! Our comprehensive meta-analysis of global terrestrial and marine genetic diversity demonstrates rapid loss of genetic diversity and identifies conservation interventions that could mitigate this process www.nature.com/articles/s41... 🧪🌍🦤🧬 #consgen #PopGen
nature.com
Global meta-analysis shows action is needed to halt genetic diversity loss - Nature
A comprehensive meta-analysis of global terrestrial and marine genetic diversity covering more than three decades of research demonstrates rapid loss of genetic diversity and identifies conservation i...
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Reposted by Kamil Hupało
Florian Leese @leeselab.bsky.social · 24/11/2024
Save the date: 📅 Am 6.12.2024 findet ab 18:00 der diesjährige #ScienceSlam des Studiengangs MSc #Biodiversität statt. 🎤🔬🧑‍🔬 Im Audimax R14 der der #UDE in Essen @unidue.bsky.social Unterstützt vom #ZWU Eintritt frei; Gäste herzlich willkommen. 🎉 #Biologie #Studium #Scicomm #Universität
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James Orr @jamesaorr.bsky.social · 02/12/2024
New paper that may be of interest to ecologists studying global change, disturbances, biodiversity, ecosystem functioning, or response diversity: doi.org/10.1038/s414...
doi.org
Variability of functional and biodiversity responses to perturbations is predictable and informative - Nature Communications
Measures of biodiversity and ecosystem functioning show variable responses to perturbations, complicating the prediction of responses to global change. This study shows that the variability of communi...
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Reposted by Kamil Hupało
Rachel Paterson @rachelpatersonnz.bsky.social · 03/12/2024
Do you want to know how the Biodiversa+ IMPACT project is helping to integrate parasites into biodiversity monitoring? Check out www.nina.no/english/IMPACT @biodiversaplus.bsky.social
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