Sign in

Reindert Nijland

@reindertn.bsky.social
612 followers 318 following 16 posts

Associate professor Molecular Marine Ecology at Wageningen University. I sequence anything, anywhere, to understand changing marine ecosystems. Main focus on the North Sea.

PostsRepliesMedia
Reposted by Reindert Nijland
David Shiffman, Ph.D. 🦈 @whysharksmatter.bsky.social · 30/10/2025
Reindert Nijland at #EEA2025 Offshore wind farms have a variety of ecosystem impacts. More hard habitat= more invertebrates at the base of the food chain. Seafloor cables transport electricity to shore- this can affect electrosensitive sharks and rays. 🧪🦑🌎🦈🐠
sciencedirect.com
Elasmobranchs in offshore wind farms
The development of offshore wind farms (OWFs) in coastal seas presents both risks and opportunities for threatened elasmobranch populations, but their…
1194
Reposted by Reindert Nijland
Chris Seymour @iiseymour.bsky.social · 21/05/2025
Dorado is 1.0! 🎉 LC25 release adds v5.2 DNA/RNA models with a new suite of mod models that are higher accuracy, lower FP rates, and significantly faster. - Introducing dorado variant 👀 - HAC error rate is down over 25%. - New 2’Ome mod models - Hopper & Blackwell SUP speed ups #Nanoporeconf
0188
Reposted by Reindert Nijland
Gerome Breen @psychgenomics.bsky.social · 21/05/2025
Now clear how much extra information from @nanoporetech.com data - especially full transcripts #nanoporeconf
123
Reposted by Reindert Nijland
Oxford Nanopore @nanoporetech.com · 21/05/2025
At London Calling, Rosemary Sinclair Dokos and Lakmal Jayasinghe shared how we’re doubling down on what matters: delivering a future-ready platform with proven performance across DNA, RNA, and now proteins. Click here to discover what’s new – and why it matters: nanoporetech.com/news/london-...
056
Reposted by Reindert Nijland
Auriel Sumner-Hempel @aurielesumner.bsky.social · 15/05/2025
Our previously published paper was picked up in local Dutch news as well as here, very exciting to see the media take notice of this work 🦈 @reindertn.bsky.social @w-u-r.bsky.social #eDNA #Sharks #Rays #OWFs oceanographicmagazine.com/news/are-off....
oceanographicmagazine.com
Are offshore wind farms the next safe spaces for sharks and rays? - Oceanographic
New eDNA evidence has confirmed the presence of active shark and rays around Dutch offshore wind farms, posing an exciting new question.
042
Reindert Nijland @reindertn.bsky.social · 10/04/2025
Two papers I contributed to, published online on the same day! Both on large charismatic fish from the North Sea: Sharks and Sturgeons! 🦈🦈 Sharks and rays: www.sciencedirect.com/science/arti... Sturgeons: link.springer.com/article/10.1...
Two young European sturgeons in a white bucket, about to be re-introduced in the wildWind turbines in the North Sea
020
Reindert Nijland @reindertn.bsky.social · 10/04/2025
Just out: Our paper on the historical occurrence of sea sturgeons (Acipenser sturio and A. oxyrinchus) in European waters, and consequences for reintroduction! link.springer.com/article/10.1...
link.springer.com
Towards an optimised strategy for reintroducing sea sturgeons (Acipenser sturio and A. oxyrinchus) to Europe - Biodiversity and Conservation
The aim of this paper is to identify an optimised strategy for the reintroduction of two anadromous sturgeon species to Europe: the critically endangered European sturgeon (Acipenser sturio) and the v...
010
Reposted by Reindert Nijland
Auriel Sumner-Hempel @aurielesumner.bsky.social · 10/04/2025
📣Excited to share that our new #paper is out! Using #eDNA #metabarcoding to detect #elasmobranchs in #OWFs in the North Sea🦈🦈 www.sciencedirect.com/science/arti... @reindertn.bsky.social @nanoporetech.com
096
Reposted by Reindert Nijland
Dr.Kat Stewart @ecoevoedna.bsky.social · 20/03/2025
Great windfarm - elasmobrach #eDNA research by Auriel Summer-Hempel @reindertn.bsky.social @aquaecomics.mastodon.social.ap.brid.gy
183
Reindert Nijland @reindertn.bsky.social · 11/02/2025
Super happy our paper on #eDNA #metabarcoding of North Sea fish using @nanoporetech.com sequencing is finally published in Molecular Ecology Resources: onlinelibrary.wiley.com/doi/10.1111/...
onlinelibrary.wiley.com
The Long and the Short of It: Nanopore‐Based eDNA Metabarcoding of Marine Vertebrates Works; Sensitivity and Species‐Level Assignment Depend on Amplicon Lengths
To monitor the effect of nature restoration projects in North Sea ecosystems, accurate and intensive biodiversity assessments are vital. DNA-based techniques and especially environmental (e)DNA metab....
1168
Reposted by Reindert Nijland
Chris Kent @chris.primalscheme.com · 23/12/2024
Fancy some light Christmas reading? I’m happy to share our new preprint, covering the impact and cutting edge improvements to PrimalScheme! Preprint: www.biorxiv.org/content/10.1...
biorxiv.org
PrimalScheme: open-source community resources for low-cost viral genome sequencing
Viral genome sequencing using the ARTIC protocol has been a vital tool for understanding the spread of epidemics including Ebola, Zika, COVID-19 and Mpox and has seen widespread adoption due to its lo...
1157
Reposted by Reindert Nijland
Cameron Thrash @jcamthrash.bsky.social · 12/12/2024
Bacterial clustering amplifies the reshaping of eutrophic plumes around marine particles: A hybrid data-driven model journals.plos.org/ploscompbiol... #jcampubs
journals.plos.org
Bacterial clustering amplifies the reshaping of eutrophic plumes around marine particles: A hybrid data-driven model
Author summary Recent lines of evidence highlight the pronounced impact of slow-moving particles on the oceanic carbon cycle and associated ecosystem functions (e.g., CO2 removal, oxygenation, acidifi...
084
Reindert Nijland @reindertn.bsky.social · 03/12/2024
I sequenced and assembled the full mitochondrial DNA of the angular crab (Goneplax rhomboides) using the @nanoporetech.com #MinION #Mk1D, so #nanopore only. The raw read quality really is amazing, and the assembly looks perfect! www.ncbi.nlm.nih.gov/nuccore/PQ64...
Angular crab on a beachAlignment of raw nanopore read to create a consensus seqeunce, showing very litte errors in the raw read dataAnnotated overview of the mitogenome assembly from Goneplax rhomboides
1162
Reposted by Reindert Nijland
Nathalie Steins @nathaliesteins.bsky.social · 03/12/2024
Made starter pack of marine scientists working @w-u-r.bsky.social. Anyone missing? Let me know. @jimvanbelzen.bsky.social @martinbaptist.bsky.social @annetpauwelussen.bsky.social @reindertn.bsky.social @rolfgroeneveld.bsky.social @hansverdaat.bsky.social @evertdefroe.bsky.social go.bsky.app/Nz4Qtjx
072
Reindert Nijland @reindertn.bsky.social · 30/11/2024
My baby Small-spotted catsharks are still happy, and so much fun to watch!
020
Reindert Nijland @reindertn.bsky.social · 21/11/2024
Today I got some new guests in my home aquarium! #babyshark #doo-doo-doo
110
Reposted by Reindert Nijland
Lachlan Fetterplace @fiskeforbrains.bsky.social · 21/11/2024
The Marine & Freshwater Research Institute in Iceland seeks a PhD student (funded 4 yr position) to research bycatch of #marinemammals & #seabirds in Icelandic fisheries (with some cross over with us here at SLU on EU projects on bycatch of sensitive species). 🐟🧪🦑🌎 www.hafogvatn.is/en/about/new...
hafogvatn.is
We are seeking a PhD student in marine biology
The Marine and Freshwater Research Institute (MFRI) in Iceland is seeking a PhD student in Marine Biology for a funded full-time position for 4 years with
15251
Reindert Nijland @reindertn.bsky.social · 19/11/2024
I contributed to this article in Pioneering Tech Magazine by TU Delft on the Ecological Impact of offshore wind in the North Sea, including North Sea underwater pictures: www.tudelft.nl/en/innovatio...
tudelft.nl
Offshore wind: how to balance growth and nature?
As you depart from Schiphol and look out over the North Sea, you’ll see 'islands' of slender, white wind turbines looming below. It’s a serene, futuristic landscape that stands in stark contrast to th...
001
Reindert Nijland @reindertn.bsky.social · 27/04/2024
Out now: Review and update on the spread of lionfish in the Mediterranean, led by WUR PhD student @BottaciniD neobiota.pensoft.net/article/1104...
neobiota.pensoft.net
Lionfish (Pterois miles) in the Mediterranean Sea: a review of the available knowledge with an update on the invasion front
Invasive species often severely impact ecosystems and human activities in the areas that they invade. The lionfishes Pterois miles and P. volitans are regarded as the most successful invasive fishes i...
010
Reindert Nijland @reindertn.bsky.social · 04/04/2024
At Marine Animal Ecology (WUR) we are developing a Biodiversity Sensing box, which combines imaging (both fish and microscopic plankton), acoustics and environmental DNA (eDNA) for marine biodiversity monitoring. More information in the article below
resource-online.nl
Automatic sampling underwater - Resource online
Measuring biodiversity without divers.
040
Reindert Nijland @reindertn.bsky.social · 22/01/2024
We recently published a forum article in Trends in Ecology & Evolution on "Edge computing in wildlife behavior and ecology". One of the presented cases is our biodiversity/fish sensing box: doi.org/10.1016/j.tr...
000
Reposted by Reindert Nijland
Thijs J. G. Ettema 🦠🔬🇳🇱🇸🇪🇪🇺 @ettema.bsky.social · 21/12/2023
Ten days remaining to apply to this exciting PhD position - join us in our quest to explore novel archaeal lineages!
01017
Reindert Nijland @reindertn.bsky.social · 19/12/2023
Great manuscript by Wageningen University PhD-student Annemiek Hermans on the "Effect of electromagnetic fields from subsea power cables on elasmobranch behaviour" now available at @biorxivpreprint.bsky.social www.biorxiv.org/content/10.1...
Windpark in the North Sea, with some terns flying the foreground.
000
Reposted by Reindert Nijland
Jan-Willem Veening @veeninglab.com · 19/12/2023
We are recruiting a new tenure track assistant professor! Join our wonderful department. The topic is microbial interactions, in its broadest sense, as long as it connects well with the NCCR Microbiomes. Application deadline Jan 30. More info here: career5.successfactors.eu/career?compa...
0921