Johannes Debler @jwdebler.bsky.social · 03/09/2026Great seminar by Professor Lee Hickey at the @theccdm.bsky.social today about AI supported plant breeding. More tomorrow at @cbsmwa.bsky.social 011
Reposted by Johannes DeblerCBSM WA @cbsmwa.bsky.social · 01/08/2026Not sure whether you should submit/register for CBSM 2026 ... aside from our stellar guest speakers, exceptional student presentations and fantastic traders, our catering all included in your registration fee and arranged by the UWA UniClub is reason enough! Submit and register here cbsmwa.au 011
Johannes Debler @jwdebler.bsky.social · 31/07/2026Both of those QR codes come back with "this code has been disabled for some reason" 😉 000
Reposted by Johannes DeblerCBSM WA @cbsmwa.bsky.social · 31/07/2026Need help registering? Follow the video below to register in time for our early bird registration before tonight! 011
Reposted by Johannes DeblerCBSM WA @cbsmwa.bsky.social · 22/07/2026Our Frontiers in Genetics breakout session and speakers are locked in for CBSM 2026! Take a look at our keynote and invited speakers who will be discussing topics including bacterial genetics, gene editing, epigenetics and DNA scaffolding and origami. 131
Johannes Debler @jwdebler.bsky.social · 05/07/2026🧬 CBSM WA 2026 — early bird rego & abstract submission now open! Breakout sessions spanning plant science, microbiology, cell & dev bio, genetics & biodiversity, plus a great plenary line-up and a networking sundowner to close. WA life scientists, come along 👇 cbsmwa.au 000
Johannes Debler @jwdebler.bsky.social · 25/05/2026100%, they can be terrors when you don't need it, but when you're crook that turns into instant "I'll just wait here with you" 😻 010
Johannes Debler @jwdebler.bsky.social · 20/05/2026#nanoporeconf come and check out my cat at poster #31, and while there help me figure out what I found in my sequencing data 001
Johannes Debler @jwdebler.bsky.social · 20/05/2026I recommend poster #31, it's the only one with my cat on it after all 😉 000
Johannes Debler @jwdebler.bsky.social · 20/05/2026#nanoporeconf provided umbrellas to enjoy the authentic London weather 😁 000
Johannes Debler @jwdebler.bsky.social · 20/05/2026Virologists at #nanoporeconf come visit me at poster #31 later and help me figure out what we found in our fungal plant pathogens 😊 000
Johannes Debler @jwdebler.bsky.social · 20/05/2026Last stop of this trip, #nanopore #LC2026, weather is on point 🤣 040
Johannes Debler @jwdebler.bsky.social · 18/05/2026Off to Oxford today to visit @elithynne.bsky.social and talk some more about my circular DNA element 🧬 161
Johannes Debler @jwdebler.bsky.social · 18/05/2026We built this for a Mad Max themed festival in Western Australia, ready for whatever comes 🤣🤘 010
Reposted by Johannes DeblerKC👨🔬🌾🍄🇦🇺 @karchuntan.bsky.social · 18/05/2026Check out the @theccdm.bsky.social spotlight article on our recent @plantdisease publication on the impact of fungal co-infection in breaking down disease resistance in wheat! 021
Johannes Debler @jwdebler.bsky.social · 16/04/2026We're hard at work to bring you another excellent #CBSMWA in 2026. 000
Johannes Debler @jwdebler.bsky.social · 25/03/2026Out doing something different at Science Meets Parliament in Canberra this week. #SMP2026 090
Johannes Debler @jwdebler.bsky.social · 15/03/2026Shiny! www.instagram.com/reel/DV6Js56... #Firefly 011
Johannes Debler @jwdebler.bsky.social · 21/01/2026This whole situation has been handled terribly so far. 110
Johannes Debler @jwdebler.bsky.social · 15/01/2026Too many superfluous robots in too many shots... 010
Reposted by Johannes DeblerThe Tattooed Professor @schwessinger.bsky.social · 08/01/2026#plantscience #plantbiology #science 035
Johannes Debler @jwdebler.bsky.social · 29/12/2025I remember when I uploaded some old pacbio data about 5 years ago it got flagged for containing 'pacbio control DNA', and was removed automatically. Which is why I was surprised so many assemblies if the ONT one made it through and got named as plasmids. 011
Johannes Debler @jwdebler.bsky.social · 29/12/2025This stuff is polluting the databases because many technicians just add it because it's in the library prep protocol. That's why I bin it as soon as I receive a new kit. Are NCBI and ENA screening for this yet? If not, they certainly should! Also, do both institutions not have accounts here?!? 220
Johannes Debler @jwdebler.bsky.social · 29/12/2025I just recalled some older Nanopore data and started fixing the assembly when I came across a 'weird' contig. Blasting it generated a lot of almost perfect hits to 'plasmids' all across the tree of life. Turns out it was the spike in control DNA that comes with the ONT library prep kit... 142
Johannes Debler @jwdebler.bsky.social · 18/12/2025Found another instance of my plasmid/virus, this time in sequencing data of Leptographium pseudotsugae, a fungal pathogen isolated from Oregon pine (Douglas fir). We're up to 11 fungal species carrying it. Still no clue what it is 🤷♂️ 040
Johannes Debler @jwdebler.bsky.social · 27/11/2025Had a lot of fun presenting our accidental finding of a circular DNA element in isolates of at least 10 different plant pathogenic fungal species at #strompath2025 050
Reposted by Johannes DeblerPeter Solomon @plantpathpete.bsky.social · 30/10/2025Registrations for the Stromlo Plant Pathogen Conference #StromPath25 are rolling in fast and the program is now full! Exciting lineup from Japan, Korea, USA, UK, NZ + strong local crew. Join us in Canberra — rego open until Nov 13. Program available here tinyurl.com/3e3tx9j2tinyurl.com10th Stromlo Plant Pathology Conference | wheatbiosecurity 185
Reposted by Johannes DeblerDaniel Croll @danielcroll.bsky.social · 29/10/2025@tobybarilbio.bsky.social and I are very excited to release MycoMobilome! A very extensive effort to discover, QC and annotate TEs across the fungal kingdom. 👉 Ready-to-use for your own genome with a simple tutorial! 👉 Metadata about TEs discovered in your genome! 👉 Contribute and get recognition! 04315
Johannes Debler @jwdebler.bsky.social · 24/09/2025You spelled "Wil" wrong, as in @wilwheaton.net who also happens to have something interesting to share 😎 I'm excited! 040
Johannes Debler @jwdebler.bsky.social · 23/09/2025Well hello there "entity" in yet another species 😎 020
Johannes Debler @jwdebler.bsky.social · 19/09/2025@mcdonaldmeganc.bsky.social Meagon! I hear congratulations are in order! All the best 😊 010
Reposted by Johannes DeblerCBSM WA @cbsmwa.bsky.social · 19/09/2025Incredible session from Professor Peter Solomon. Engaging and highly relevant to Australia’s wheat and plant pathogen landscape. #CBSMWA #CBSMWA2025 042
Johannes Debler @jwdebler.bsky.social · 19/09/2025Dr. @jamespblloyd.bsky.social and @theccdm.bsky.social Dr. Liz Czislowski wrapping up the Biodiversity session at @cbsmwa.bsky.social with synthetic gene circuits for plants in space and novel nucleic acid based nanoparticle fungicides 032
Johannes Debler @jwdebler.bsky.social · 19/09/2025Having fun at @cbsmwa.bsky.social presenting work on "The Entity", a circular genetic element we keep finding in unrelated fungal plant pathogens. #cbsmwa @theccdm.bsky.social 092
Johannes Debler @jwdebler.bsky.social · 16/09/2025Come see Peter at #CBSMWA on Friday and at @theccdm.bsky.social on Thursday :-) 041
Reposted by Johannes DeblerPeter Solomon @plantpathpete.bsky.social · 20/08/2025Registrations are rolling in for the 2025 Stromlo Plant Pathology meeting in Canberra (Nov 27–28)! Secure your spot! Speakers: @yasukadota.bsky.social, Cecille Segonzac, @thamlab.bsky.social, @yichangsung.bsky.social, Tek Tay & @danielsyu.bsky.social. Register at tinyurl.com/3e3tx9j2 #strompath25tinyurl.com10th Stromlo Plant Pathology Conference | wheatbiosecurity 01613
Reposted by Johannes DeblerCBSM WA @cbsmwa.bsky.social · 19/08/2025Join us in our CBSM WA 2025 Biodiversity session with invited speaker Dr James PB Lloyd. His talk will focus on the threat of climate change to our global food security and the potential for programmable genetic systems as a solution. 031
Reposted by Johannes DeblerCBSM WA @cbsmwa.bsky.social · 28/07/2025At CBSM WA in 2024 we heard from renowned parasitologist Prof Shookofeh Shamsi. Her presentation explored how overlooking parasites can lead to incomplete conclusions about biodiversity. Prof. Shamsi's vision is to create a world where professionals and public are well-informed about parasites. 011
Reposted by Johannes DeblerCBSM WA @cbsmwa.bsky.social · 28/07/2025The CBSM 2024 trade exhibit provided students and researchers the opportunity to create meaningful connections with industry and to discuss the latest and greatest technology available! Make sure to check out the trade exhibit at the 2025 meeting! 011
Johannes Debler @jwdebler.bsky.social · 23/07/2025Unless by RNA seq they mean cDNA, then you probably could do it. If it's a good idea though is a different question altogether 😊 010
Johannes Debler @jwdebler.bsky.social · 27/06/2025There is no such thing as too many Star Trek memes in any presentation 😎🖖 010
Reposted by Johannes DeblerMarc Somssich @somssich.bsky.social · 10/06/2025#PlantScience colleagues, please think twice before working with the new Springer Nature Discover branded journals. And then don't. 02210
Reposted by Johannes DeblerMary Pezzulo @marypezzulo.bsky.social · 23/05/2025I've never seen it so well put before. 77109172930
Johannes Debler @jwdebler.bsky.social · 21/05/2025Slaps roof of PromethION "this bad boy can sequence sooo many genomes!" #nanoporeconf 061