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Julia Kreiner

@jmkreiner.bsky.social
1.7K followers 661 following 55 posts

Assistant prof at UChicago EEB. The genomics of plant adaptation in rapidly changing environments. kreinerlab.com Opinions expressed are my own, and do not necessarily represent those of my employer.

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Reposted by Julia Kreiner
Andrew Hipp @andrewlhipp.bsky.social · 28/08/2026
new position at @morrisarboretum.bsky.social, endowed Molecular Ecologist. check it out: wd1.myworkdaysite.com/en-US/recrui...
wd1.myworkdaysite.com
John Otto Haas Molecular Ecologist; Morris Arboretum & Gardens
University Overview The University of Pennsylvania, the largest private employer in Philadelphia, is a world-renowned leader in education, research, and innovation. This historic, Ivy League school co...
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Reposted by Julia Kreiner
Henry North @henrylnorth.bsky.social · 24/08/2026
Congrats to @cd-williams.bsky.social on his first first-author paper! We developed a sequential SDM approach to quantitatively incorporate information about local adaptation into range forecasts for invasive species. Feedback welcome! www.biorxiv.org/content/10.6...
biorxiv.org
Genetically informed distribution models refine predictions for the overwintering range of Helicoverpa armigera in North America
The ecological and economic threat posed by invasive pests demands proactive mitigation. Species distribution models (SDMs) are widely used in efforts to predict where invasive species might spread af...
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Reposted by Julia Kreiner
Yun Deng @yundeng.bsky.social · 26/08/2026
This is one of the best ARG talks I’ve ever heard and there are lots of good tips for best practice in empirical studies. If you are interested in using ARG-based methods to your system, I highly recommend that you check this out.
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Jeffrey Ross-Ibarra @jrossibarra.bsky.social · 24/08/2026
Congrats to @reginafairbanks.bsky.social for successfully exiting their PhD (we have exit seminars not defenses)! From ARGs to archaeology Regina has been fantastic and fun to work with. They are off next month to start a pdoc with @jmkreiner.bsky.social!
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Reposted by Julia Kreiner
Jae Young Choi @jychoi.bsky.social · 10/08/2026
Excited to share a study led by my postdoc Naseem Samo. If you evolve an "unusual" telomere DNA does your telomerase also coevolve to maintain interaction with that strange telomere? Answer we find is YES! www.biorxiv.org/content/10.6...
biorxiv.org
Rapid evolution and functional divergence of the monkeyflower Mimulus lewisii telomerase
Telomeres are nucleoprotein structures that protect chromosome ends and are maintained by the Telomerase Reverse Transcriptase (TERT) protein that uses a noncoding Telomerase RNA (TR) as a template. I...
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Reposted by Julia Kreiner
Jenn Coughlan @jenncoughlan.bsky.social · 02/08/2026
So proud of this manuscript- lead by the fantastic @henryarenas.bsky.social with two undergraduates (Cage Cochran and Quinn Evans) each doing a Herculean effort during their honors theses, and Hongfei Chen helping out tremendously with lab work. www.biorxiv.org/content/10.6...
biorxiv.org
Maintenance of phenotypic divergence in two sympatric monkeyflowers with weak reproductive isolation
Sympatric species often exhibit permeable reproductive barriers, yet many of them coexist as phenotypically distinct entities. One way to account for this apparent paradox is that selection on loci th...
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Julia Kreiner @jmkreiner.bsky.social · 31/07/2026
uchicago.wd5.myworkdayjobs.com/External/job... The Kreiner and Carley Lab groups are hiring a shared Research Analyst to help lead wet lab protocol development and management. We're a fun group and would love to hear from you :) Get in touch with questions!
uchicago.wd5.myworkdayjobs.com
Research, Analyst
Department BSD E&E Carley Lab About the Department The Kreiner Lab (kreinerlab.com) and Carley Lab (carleylab.uchicago.edu) in the Department of Ecology & Evolution at The University of Chicag...
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Reposted by Julia Kreiner
Ben Hopkins @brhopkins92.bsky.social · 29/06/2026
I’m at #SMBE2026 this week. My lab is looking to hire a postdoc to study the genetic and developmental mechanisms underlying the evolution of organs and cell types. Please reach out if you’re interested!
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Julia Kreiner @jmkreiner.bsky.social · 15/06/2026
Thank you @genetics-gsa.bsky.social for an awesome #PEQG26 meeting! The Kreiner lab had a stellar time sharing our work and catching up with folks on the latest. Till next time!
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Joana L. Rocha @joanocha.bsky.social · 08/06/2026
We are excited to share our pan-pangenome paper! This is a long time coming work of my postdoc with the incredible @psudmant.bsky.social, and a stellar group of people! I hope you enjoy reading it! And I am excited to talk more more about it this week at #PEQG26!! www.biorxiv.org/content/10.6...
biorxiv.org
A Pan-pangenome illuminates complex structural variation and selection in humans, chimpanzees, and bonobos
Complete, haplotype-resolved genome assemblies have provided unprecedented insight into the evolution of structurally complex, rapidly evolving regions of human genomes; however, population-scale pang...
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Julia Kreiner @jmkreiner.bsky.social · 27/05/2026
Abstract deadline for Midwest Pop Gen 2026 extended to June 12th! Aug 21-22 at UChicago — free, trainee-oriented meeting with talks, posters + Friday BBQ at Promontory Point. Chicago in August doesn't get better than this... jkreinz.github.io/mwpg2026
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Jae Young Choi @jychoi.bsky.social · 30/04/2026
I'm looking to hire a postdoc. Please share if you can!
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Dan Schrider @samurscicop.bsky.social · 28/04/2026
Please circulate: I will have a postdoc opening soon, ideally with a start date sometime this summer or fall. If you're interested in empirical population genetics, computational methods development, and/or evolutionary modeling via simulation, don't hesitate to reach out. For more info on the lab:
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Marco Todesco @mtodesco.bsky.social · 16/04/2026
We are looking for a postdoc to help with a project on eelgrass genomics, in collaboration with the O'Connor and Rieseberg labs at UBC - see ad here tinyurl.com/2yd487p4! Come and join us in beautiful Vancouver 🌊🌾🏔️
tinyurl.com
Postdoc Position Eelgrass Population Genomics_UBC_2026.pdf
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PlantEvolution 🌱🌾 @plantevolution.bsky.social · 14/03/2026
1/11 🔥 New preprint alert 🔥 We wanted to know what plants in the wild really care about. So we asked them 🎤. Here is what we learned: “Biotic-response networks are an important organizer of the transcriptome in wild Arabidopsis thaliana populations” www.biorxiv.org/content/10.6...
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Julia Kreiner @jmkreiner.bsky.social · 23/03/2026
Building a pop genomics lab around selective sweeps in the DGRP dataset, but can't track down a VCF online. Federal funding casualty? Anyone know where to find a working link?
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Chris Fiscus @fiscuscj.bsky.social · 02/03/2026
Excited to share our new preprint! 🍇🧬 We analyzed 639 genomes across 48 grape species to understand how hybridization drives adaptation. • ~14% of average Vitis genome is introgressed • Most parallel adaptations are shared via gene flow • Two "hybrid species" are actually hybrid swarms
biorxiv.org
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Jeffrey Ross-Ibarra @jrossibarra.bsky.social · 27/02/2026
Huge congrats to @reginafairbanks.bsky.social who was just awarded a Chicago Fellows postdoctoral position to go work with @jmkreiner.bsky.social on the population genetics of adaptation in Amaranthus!
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New Phytologist @newphyt.bsky.social · 18/12/2025
We are delighted to announce that the winner of the 2025 New Phytologist #TansleyMedal is @camilledelavaux.bsky.social! Read the #Editorial by Slater & Dolan 👇 📖 nph.onlinelibrary.wiley.com/doi/10.1111/... #LatestIssue #PlantScience @niooknaw.bsky.social 🧵1/2
Camille S. Delavaux
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Rachel Germain @gerlame.bsky.social · 03/11/2025
Applications are currently being accepted for UBC's ✨️ Biodiversity Postdoctoral Fellowship ✨️ (two positions!!), due Jan. 15 Please share far and wide 🚀 (See thread)
biodiversity.ubc.ca
Postdoctoral Fellowship Opportunities
Biodiversity Postdoctoral Fellowship, 2-year (2026-2028) - 2 positions OPENAt UBC, we believe that attracting and sustaining a diverse workforce is key to the successful pursuit of excellence in resea...
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José Aguilar-Rodríguez @jaguilarrod.bsky.social · 22/10/2025
One of the most exciting works of my career, years in the making. We used high-throughput precision genome editing to test the fitness effects of thousands of natural variants. Our findings challenge the long-held assumption that common variants are inconsequential. www.biorxiv.org/content/10.1...
biorxiv.org
Massively parallel interrogation of the fitness of natural variants in ancient signaling pathways reveals pervasive local adaptation
The nature of standing genetic variation remains a central debate in population genetics, with differing perspectives on whether common variants are almost always neutral as suggested by neutral and n...
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Leonie Moyle @speciationlab.bsky.social · 14/10/2025
Great new postdoc fellowship for foundational plant research. If you’re into genetics and genomics of plant reproductive evolution or adaptive convergence (incl in the cool and charismatic nightshades!) I’d be happy to talk about possible projects! www.simonsfoundation.org/grant/simons...
simonsfoundation.org
Simons Postdoctoral Fellowships in Plant Biology
Simons Postdoctoral Fellowships in Plant Biology on Simons Foundation
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Julia Kreiner @jmkreiner.bsky.social · 06/10/2025
Human-mediated land-use and climate change occur simultaneously, but how do they interact to shape adaptive dynamics? Super excited to share the first paper from the Kreiner lab, led by postdoc extraordinaire @rpineau.bsky.social
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New Phytologist @newphyt.bsky.social · 29/09/2025
Join us tomorrow (30 Sept) at 14:00 BST to hear from 2024 #TansleyMedal winner Matthew Naish! Matthew will be talking about unravelling plant centromeres in the telomere-to-telomere era. Registration is free: www.newphytologist.org/events/2025-... #PlantScience
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Andrew Hipp @andrewlhipp.bsky.social · 28/09/2025
Asters and goldenrods, Maple Grove Forest Preserve, yesterday morning. Fight for democracy, science, human decency, and the natural world, and continue celebrating what you are fighting for.
Aster shortii; Maple Grove Forest Preserve, 27 Sept 2025Zig-zag goldenrod (Solidago flexicaulis); Maple Grove Forest Preserve, 27 Sept 2025Drummond's aster (Symphyotrichum drummondii); Maple Grove Forest Preserve, 27 Sept 2025Calico aster (Symphyotrichum lateriflorum); Maple Grove Forest Preserve, 27 Sept 2025
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Kevin Bird @stairwaytokevin.bsky.social · 28/09/2025
New — with @joannarifkin.bsky.social, @jotlovell.bsky.social, @spicybotrytis.bsky.social, and many more — we created seven new high-quality genomes and explored pangenomic variation in the emerging oilseed crop pennycress (Thlaspi arvense). 1/
biorxiv.org
Structure and sequence evolution in the pennycress (Thlaspi arvense) pangenome
Summary · Eukaryotic genomes harbor many forms of variation, including nucleotide diversity and structural polymorphisms, which experience natural selection and contribute to genome evolution and biod...
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Reposted by Julia Kreiner
Jenn Coughlan @jenncoughlan.bsky.social · 24/09/2025
This was a HUGE effort, taking years of diligent work. Hongfei was a true leader, and I'm really proud of this cool piece. We'd love any feedback y'all might have. www.biorxiv.org/content/10.1...
biorxiv.org
Unique genetic bases of repeated life-history divergence associated with high altitude adaptation in Mimulus perennials
Understanding evolutionary repeatability is a central question in biology, as it informs how predictably organisms respond to similar selection pressures. However, the extent to which phenotypic repea...
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James Harvey @keepof4worlds.bsky.social · 24/09/2025
Wonderful news. A salutary reminder of the absolute benefits of scientific progress, and the absolute evil of conspiracist bollocks. Huntington's disease successfully treated for first time www.bbc.com/news/article...
bbc.com
Huntington's disease successfully treated for first time
One of the most devastating diseases finally has a treatment that could transform lives, tearful doctors tell BBC
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Julia Kreiner @jmkreiner.bsky.social · 22/09/2025
Fun to synthesize some exciting future directions for spatiotemporal genomics in this Tansley perspective. Check er out!
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Sam Yeaman @samyeaman.bsky.social · 19/09/2025
I'll start reviewing applications in a little over 3 weeks for this PhD position. You could be doing fieldwork here! (or focus only on dry lab work if that floats your boat)
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Julia Kreiner @jmkreiner.bsky.social · 19/09/2025
Would be excited to chat with folks looking for a postdoc in AI to develop models for genomic prediction... A great opportunity for funding coming up soon is the Schmidt AI in Science fellowship, due October 13th! apply.interfolio.com/173322
apply.interfolio.com
Apply - Interfolio {{$ctrl.$state.data.pageTitle}} - Apply - Interfolio
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Reposted by Julia Kreiner
Dmitri Petrov @petrovadmitri.bsky.social · 15/09/2025
Very excited to see this work in press! I think there is a reason to believe that this is a common means of stabilizing large-effect polymorphisms in general and might be an important reason for why diploidy is so common. news.stanford.edu/stories/2025...
news.stanford.edu
Classic recessive-or-dominant gene dynamics may not be so simple
New fruit fly research provides the first direct evidence of “dominance reversal,” revealing why pesticide resistance is so hard to eliminate in changing environments.
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Marianna Karageorgi @mkarag.bsky.social · 15/09/2025
How do populations maintain an evolutionary memory? I am happy to share that our work with Dmitri Petrov @petrovadmitri.bsky.social, Paul Schmidt, and colleagues on dominance reversal and stabilization of insecticide resistance in changing environments over time is now published at Nature EE.
nature.com
Beneficial reversal of dominance maintains a large-effect resistance polymorphism under fluctuating insecticide selection - Nature Ecology & Evolution
Measuring selection and dominance in fitness of the insecticide-resistant Ace alleles in Drosophila melanogaster, the authors show evidence for beneficial reversal of dominance, a mechanism that can s...
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Daniel Ortiz-Barrientos @dortizba.bsky.social · 03/09/2025
We’ve just published a paper on Senecio showing that ecological speciation and mutation-order speciation can act together rather than as an either/or. Congratulations, Maddie James and MC Melo!
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Ronan @omalley-regulome.bsky.social · 28/08/2025
Our new Nature Plants paper is out (and we’re on the cover 😁)!👉 bit.ly/4lS8sOB By combining scRNA-seq with conserved TF binding (multiDAP) we define gene regulatory networks for 65 cell types across 4 tissues in a wide range of flowering plants!
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Ethan Bass @ethanbass.bsky.social · 22/08/2025
Check out my primer in PLOS biology and the associated article by Wan and colleagues showing interesting new patterns in inducibility across multiple defense traits.
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Javier Santoyo @jsantoyo.bsky.social · 17/08/2025
Pangenome analysis of transposable element insertion polymorphisms reveals features underlying cold tolerance in rice. #TransposableElements #TE #Pangenomes #RiceGenomes @natcomms.nature.com www.nature.com/articles/s41...
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Claus Wilke @clauswilke.com · 15/08/2025
A simple design framework that will massively improve your slides and your public speaking clauswilke.substack.com/p/slides-tha...
clauswilke.substack.com
Slide designs that present themselves: The assertion–evidence template
Your slides are not your talk.
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Charikleia Karageorgiou (Clio) @evobioclio.bsky.social · 15/08/2025
Our latest preprint explores the evolution of the primate amylase locus, uncovering structural innovations, regulatory shifts and molecular convergence. www.biorxiv.org/content/10.1...
biorxiv.org
Convergent evolution through independent rearrangements in the primate amylase locus
Structurally complex regions of the genome are increasingly recognized as engines of evolutionary convergence due to their propensity to generate recurrent gene duplications that give rise to similar ...
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Henry North @henrylnorth.bsky.social · 16/08/2025
On my way to #ESEB2025 ! I’ll share some new results showing bi-directional introgression of structural variants, which cause resistance to different insecticides, between native and invasive agricultural pests 🐛 Monday 10:30am, S05 rooms 120-121
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New Phytologist @newphyt.bsky.social · 08/08/2025
#Viewpoint: Measuring #NaturalSelection on the transcriptome John R. Stinchcombe & John K. Kelly 👇 📖 nph.onlinelibrary.wiley.com/doi/full/10.... #LatestIssue
Schematic depicting the mapping from genotype to fitness.
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Sarah W. Fitzpatrick @swfitz.bsky.social · 11/08/2025
Excited to share our new paper led by @alexlewanski.bsky.social showing largely positive, multi-decadal consequences of translocations in Red-cockaded woodpeckers at Avon Park Air Force Range in central Florida: www.pnas.org/doi/10.1073/... press release: www.eurekalert.org/news-release...
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tracey depellegrin @traceydepellegrin.bsky.social · 12/08/2025
"...science loses meaning if it comes at the cost of human potential, and mentorship is, at its core, about nurturing that potential." Wise words from Brandon Gaut, whose essay is worth a read for mentors and mentees alike. We're so glad he is the recipient of our inaugural GSA Mentorship Award.
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Molly Schumer @mollyschumer.bsky.social · 10/08/2025
Our review on the last decade+ of hybrid incompatibility research is now out! www.sciencedirect.com/science/arti... Original thread here: bsky.app/profile/moll...
sciencedirect.com
The molecular evolutionary basis of species formation revisited
How do new species arise? This is among the most fundamental questions in evolutionary biology. The first genetic model for how reproductive barriers …
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Jessica Budke 🌱🥼🔬 @mossplants.bsky.social · 02/08/2025
Know an Evolutionary Genomicist looking for a faculty position? Join us in EEB @utknoxville.bsky.social Position is open for studying any organism, but personally I have some botany bias. 🌱 Apply before Sept 19 for full consideration. apply.interfolio.com/170735 Please share widely. Thanks!
apply.interfolio.com
Apply - Interfolio {{$ctrl.$state.data.pageTitle}} - Apply - Interfolio
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Marc Johnson (he/him) @evoecolab.bsky.social · 30/07/2025
My department @utoronto.ca (www.utm.utoronto.ca/biology/) is hiring a molecular biologist in any field (e.g., ecology, evolutionary biology, etc.). Please encourage any excellent finishing PhD students, postdocs or assistant professor to apply here: jobs.utoronto.ca/job/Mississa...
utm.utoronto.ca
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Margaret Evans @mekevans.bsky.social · 31/07/2025
New paper out on the dangers of using patterns across spatial climate gradients to predict what will happen with changing climate. That includes species distribution modeling. Space-for-time substitution can be misleading in sign, not just the magnitude of effects. www.nature.com/articles/s41...
nature.com
Reconsidering space-for-time substitution in climate change ecology - Nature Climate Change
Ecologists often leverage patterns observed across spatial climate gradients to predict the impacts of climate change (space-for-time substitution). We highlight evidence that this can be misleading n...
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Tiago Simões @trsimoes.bsky.social · 22/07/2025
A rare job opportunity for Invertebrate Zoology: fieldmuseum.hrmdirect.com/employment/j...
fieldmuseum.hrmdirect.com
Assistant Curator of Invertebrate Zoology, Careers At Field Museum
Position Assistant Curator of Invertebrate Zoology FLSA Status Exempt Department Negaunee Integrative Research Center Our Mission Since the 1893 World Columbian Exposition our organization has aimed...
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