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Jialin Liu

@jialinliu.bsky.social

PostDoc @schierlab.bsky.social, @biozentrum.unibas.ch Single cell genomics, Deep learning, Gene Regulation, Embryonic Development

Posts Replies Media

Reposted by Jialin Liu

Yinan Wan @yinanwan.bsky.social · 02/06/2026

Excited to share that I will start my lab at the Center for Integrative Genomics in Lausanne @unil.bsky.social in Jan 2027! I’m looking for PhD students fascinated by how cells build tissues and excited about developing new technologies to study development across scales. www.wanlab.bio/pages/9397

wanlab.bio

Yinan Wan Lab | UNIL CIG - Join us!

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Reposted by Jialin Liu

MC Gambetta @mcgambetta.bsky.social · 04/05/2026

Hello all, our lab is recruiting a PhD candidate to study how 3D genome folding impacts gene regulation in development. We're located at the Center for Integrative Genomics department of the University of Lausanne, Switzerland. Please email me if interested. #PhDPosition, #PhDOpportunity

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Reposted by Jialin Liu

MwahahahahahadScientist @mads100tist.bsky.social · 08/04/2026

If cell diversity and developmental biology are your thing, my talk will extremely be your jam. Come for the whole-mount spatial transcriptomics and 14Tb light-sheet videos, stay for the humble RNA in situs. Everyone loves in situs 🧪🐟🧅

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Jialin Liu @jialinliu.bsky.social · 02/04/2026

From fate to form: the journey to whole-embryo spatial transcriptomics! congratulations @yinanwan.bsky.social , so well deserved!!!

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Jialin Liu @jialinliu.bsky.social · 03/12/2025

very cool method to detect positive selection on regulatory sequences!

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Reposted by Jialin Liu

Jain_Akanksha_ @akanksha-jain.bsky.social · 07/10/2025

🧠 Join us @uzh-ch.bsky.social ! We are a new lab looking for PhDs, Postdocs & Master’s students interested in studying how human neural systems emerge & go awry using brain organoids, light-sheet imaging & genomics. 🚀 Deadline for LSZGS 1st Nov! www.lifescience-graduateschool.uzh.ch/en.html.

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Reposted by Jialin Liu

Taro Kitazawa @kitazawa-taro.bsky.social · 16/08/2025

Please RP. We are thrilled to announce that our lab’s first preprint is out! ”Whole-genome single-cell multimodal history tracing to reveal cell identity transition” We report HisTrac-seq, a multiomic single-cell molecular recording platform. www.biorxiv.org/content/10.1...

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Reposted by Jialin Liu

James Gagnon @james-gagnon.bsky.social · 02/06/2025

To dissect the gene regulatory networks used to build organisms, we need Perturb-seq-like tools that work in whole animals. For this purpose, we developed MIC-Drop-seq, a tool that couples high-throughput CRISPR in zebrafish embryos with single-cell RNAseq. www.biorxiv.org/content/10.1...

biorxiv.org

MIC-Drop-seq: Scalable single-cell phenotyping of mutant vertebrate embryos

Pooled perturbation screens can reveal cellular regulatory networks, yet scaling these techniques for large-scale screens in animals remains challenging. To address this, we developed MIC-Drop-seq, wh...

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Reposted by Jialin Liu

Biozentrum, University of Basel @biozentrum.unibas.ch · 27/02/2025

Using a newly developed AI model, the research group @schierlab.bsky.social @biozentrum.unibas.ch @unibasel.ch has discovered in #zebrafish that certain sections of #mRNA control the extent of protein synthesis during early embryonic development. ow.ly/4zyU50V7v1c @cellpress.bsky.social

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Reposted by Jialin Liu

Stephen Turner @stephenturner.us · 12/02/2025

The Genomic Code: the genome instantiates a generative model of the organism www.cell.com/trends/genetics/fullte…

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Reposted by Jialin Liu

Tschopp Lab @tschopplab.bsky.social · 03/12/2024

Please spread the word: we have @snf-ch.bsky.social -funded #Postdoc and #PhD positions in our lab, to investigate the gene regulatory dynamics during vertebrate skeletogenesis in a comparative setting (see doi.org/10.1101/2024... doi.org/10.1101/2024... ) apply by 31.12.24, start date by 1.2.25!

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Reposted by Jialin Liu

Jeff Farrell @jeffreyafarrell.bsky.social · 26/11/2024

Out now in Dev Cell! scRNAseq trajectories describe the cascade of gene expression as cells differentiate, but turning them into a clear understanding of the underlying biology of a cell type's development remains challenging. authors.elsevier.com/c/1k9qj5Sx5g... (1/)

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