iiinova — where your digital self keeps evolving

Reposted by Ingrid Bunholi

Marcela M. Alvarenga @marcelaalvarenga.bsky.social · 19/09/2025

🚨 New paper in Molecular Ecology Resources! We compiled the most applied rapid DNA/eDNA-based ID tools & primers for #sharks and #rays 🦈 A practical guide to help scientists, managers & enforcement choose the right method for conservation action. Read here: doi.org/10.1111/1755... #OpenScience #eDNA

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Ingrid Bunholi @ingridbunholi.bsky.social · 05/09/2025

I would not miss this opportunity!

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Ingrid Bunholi @ingridbunholi.bsky.social · 07/01/2025

Elacatinus randalli (Bohlke & Robins, 1968) Main traits: Max 4.6cm; snout yellow/brown with short narrow yellow bar; narrow yellow stripe along upper body (from top eye to tail fin base) Distribution: SE Caribbean

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Ingrid Bunholi @ingridbunholi.bsky.social · 06/01/2025

Epinephelus striatus (Block, 1792) Nassau grouper (Serranidae) Main traits: Max 122cm; tan + irregular dark bars; black saddle (mark) tail base; tan stripe Y shape through eyes. Distribution: Bermuda to Guyana 📷 Mark Betts (STRI website)

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Ingrid Bunholi @ingridbunholi.bsky.social · 05/01/2025

Acanthemblemaria aspera (Longley, 1927) Roughhead blenny (family Chaenopsidae) Main traits: max 4cm; small pointed spines on snout; colors changeable (male colorless to dark - females yellowish) Distribution: The Bahamas to the South Caribbean 📷 CABRA lab

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Ingrid Bunholi @ingridbunholi.bsky.social · 05/01/2025

One of this year’s goals: get better at identifying fish species 🐠 I’ll be sharing one species a day to keep me on track - hopefully it lasts 😆 If you’re not a fan of fish... well, you’ve been warned.

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Marine eDNA Dude @marinednadude.bsky.social · 30/12/2024

Check out our latest paper on #eDNA and metabarcoding data reporting standards 🤓🧬🧪 These minimum reporting guidelines for metabarcoding workflows extend from the physical layout of laboratories through to data archiving enhance trust and reliability in data mbmg.pensoft.net/article/1286...

mbmg.pensoft.net

The MIEM guidelines: Minimum information for reporting of environmental metabarcoding data

Environmental DNA (eDNA) and RNA (eRNA) metabarcoding has become a popular tool for assessing biodiversity from environmental samples, but inconsistent documentation of methods, data and metadata make...

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Ingrid Bunholi @ingridbunholi.bsky.social · 13/12/2024

Thank you @ednacollab.bsky.social for the opportunity to attend this course! It was intense, but an immensely valuable experience 🧬

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Ingrid Bunholi @ingridbunholi.bsky.social · 13/12/2024

Such a fun evening with the 2nd CABRA lab cookie competition 🍪and of course @chemingson.bsky.social won as the most decorative! Who wants to guess which fish species he’s representing? 🐠🤣

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Kristy Deiner @alpineedna.bsky.social · 27/11/2024

Are you curious how #eDNA is degraded by photochemistry in the environment? I teamed up with Environmental Chemist's @krismcneill.bsky.social and Eliane Ballmer to see if we could map out what is known and how to move forward --> pubs.acs.org/doi/10.1021/...

pubs.acs.org

Potential Role of Photochemistry in Environmental DNA Degradation

Given the severe loss of species richness across diverse ecosystems, there is an urgent need to assess and monitor biodiversity on a global scale. The analysis of environmental DNA (eDNA), referring t...

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Ingrid Bunholi @ingridbunholi.bsky.social · 22/11/2024

1st CABRA Lab CryptoVison Fish-ID contest it was definitely one of the best lab meetings of the semester 🐠🐠🐠

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Jordan Casey @jordancasey.bsky.social · 22/02/2024

New publication led by 🌟 undergrad Ariel Wang: doi.org/10.1007/s003... We investigate Risor ruber, the tusked goby, a tiny sponge-dwelling fish. Across the Caribbean, we find seven distinct genetic lineages within Risor and discover that two Risor lineages specialize on a single sponge host!

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Dr.Kat Stewart @ecoevoedna.bsky.social · 17/11/2024

I started an #eDNA starter pack as one didn’t exist yet. Feel free to message me to get your name added. Open to all! go.bsky.app/U2vgV5Q

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Ingrid Bunholi @ingridbunholi.bsky.social · 08/05/2024

Just had a wonderful week in Mexico with the Risor ruber team for our writing (and fun) retreat! It’s been amazing to learn and work with y’all! So excited to what’s to come! #gobyteam 🐠🧬 @TheresaRueger @jordancasey.bsky.social @gobyone.bsky.social

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Ingrid Bunholi @ingridbunholi.bsky.social · 29/04/2024

Starting the week with great news! I'm so happy to have been awarded the 2024 @ICRSCoralReefs Graduate Fellowship to conduct part of my doctoral research exploring the connectivity between Brazilian and Caribbean reef fishes! 🐠🧬

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Ingrid Bunholi @ingridbunholi.bsky.social · 15/04/2024

Thrilled to share my PhD preliminary findings at the 52nd Benthic Ecology Meeting! I’m so excited to continue unveiling the world of this little cryptobenthic fish! Stay tuned for updates on their pop gen, microbiome and ecological specialization 🧬🐠 #BEM2024

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Marcela M. Alvarenga @marcelaalvarenga.bsky.social · 19/03/2024

Our paper in the Brazilian press! "Eight out of ten species of sharks and rays in national trade are threatened with extinction" abori.com.br/oceanografia... @ingridbunholi.bsky.social

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Christopher R. Hemingson @chemingson.bsky.social · 19/03/2024

Excited to finally have this paper out after multiple years in the making. "Analysing biological colour patterns from digital images: An introduction to the current toolbox" onlinelibrary.wiley.com/doi/10.1002/...

onlinelibrary.wiley.com

Analysing biological colour patterns from digital images: An introduction to the current toolbox

Ecology & Evolution is a broad open access journal welcoming research in ecology, evolution, and conservation science, and providing a forum for evidence-based views.

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Ingrid Bunholi @ingridbunholi.bsky.social · 18/03/2024

🧬🦈🌊 New study reveals the urgency of regulating the trade of sharks and rays in Brazil. A Meta-Analysis of all studies using DNA based methods to track trade of elasmobranchs identified 64 species being commercialized, being 83% threatened ones (IUCN). Check the key highlights:

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Ingrid Bunholi @ingridbunholi.bsky.social · 29/02/2024

So happy to have been awarded the Clark Hubbs Scholarship from @TCAFS for my eDNA/eRNA chapter on the southern flounder! 🧬 And even happier to celebrate this feeling with @scubamelman.bsky.social - which is doing an incredible work on Texas blennies 🐠 @amfisheriessoc.bsky.social

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Texas SWMS @txswms.bsky.social · 16/02/2024

SAVE THE DATE - Sat, Feb 24th 11am-4pm TX SWMS is participating in UT STEM Girl Day hosted by UT WiSTEM Stop by to learn about corals, careers in marine science, and the work TX SWMS is doing across the state of Texas! 🔗https://girlday.utexas.edu #UTGirlDay

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Texas SWMS @txswms.bsky.social · 08/02/2024

TXSWMS's inaugural meet was as big as the Lone Star State! Huge thanks to everyone who joined - this wouldn't be possible without y'all. Want to stay in the loop and join upcoming events? 🐠🪸🌊 Check out our website: texasswms.wixsite.com/texas-swm #TXSWMS #STEM #WomenInSTEM

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Texas SWMS @txswms.bsky.social · 06/02/2024

Our first meeting is today! Come hang out on zoom at 5:30pm to learn about everything going on with Texas SWMS. DM or email us for a zoom link!

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Leonardo Feitosa 🦈 @manirfeitosa.bsky.social · 12/01/2024

New #OA research just published today in Science! We show that despite increases in regulations governing #shark fisheries, shark mortality has actually increased from 76 million in 2012 to 80 million in 2019, 25 million of these comprising threatened species doi.org/10.1126/scie...

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Matthew A. Barnes @drbarnes.org · 28/11/2023

Interesting, thoughtful perspective on #eDNA from Elaine Shen link.springer.com/article/10.1...

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Ingrid Bunholi @ingridbunholi.bsky.social · 16/11/2023

One more month of eDNA sampling in our backyard! 🧬🐠 #eDNA @JPiplectrus @thecaseylab.bsky.social Texas winter has all my heart (so far 😂)

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Ingrid Bunholi @ingridbunholi.bsky.social · 03/11/2023

Such a challenging week but I definitely feel more prepared to dive into my sequences! 🧬🐠 Special thanks to the wonderful team of instructors! @naiarare.bsky.social @TerezaManousaki @NataliaDA10

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🧬Jacob L Steenwyk @jlsteenwyk.bsky.social · 02/11/2023

#R Package Update: There are ~2x as many colorblind-friendly color palettes🎨 in ggpubfigs, which can help make your #figures📊 accessible to as many people as possible Link to GitHub: github.com/JLSteenwyk/g... Link to Publication: journals.asm.org/doi/10.1128/...

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Ingrid Bunholi @ingridbunholi.bsky.social · 01/11/2023

It’s been a very intense week of coding around here in the RADseq Physalia course 🧠🔥 Can’t wait to analyze my own data 🧬

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Alex Good, M.Sc. @sciencegalal.bsky.social · 01/11/2023

It was a 2023 goal to finish my website, I’m so excited to finally share it with y’all 🤗🪸🦪 alexxgood.wixsite.com/sciencegalal

alexxgood.wixsite.com

Home | Sciencegalal

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David Shiffman, Ph.D. 🦈 @whysharksmatter.bsky.social · 30/10/2023

Happy International Ghost Shark Day! Learn more about these amazing animals and the threats they face: onlinelibrary.wiley.com/doi/abs/10.1... 🧪🦑🌎🐡🦈

International ghost shark day graphic with drawings of different species

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Ingrid Hyrycena @ingridhyrycena.bsky.social · 23/10/2023

Hello everyone, my name is Ingrid (she/her)! I’m a Master’s degree student at the Federal University of São Paulo. I work on the ecology, fisheries and conservation of cartilaginous fishes (sharks, rays, and chimaeras) in Brazil 🇧🇷🦈.

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Ingrid Bunholi @ingridbunholi.bsky.social · 19/10/2023

Had such a great day today working at our local elementary school for the Science in Residence program from @UTMSI! It was really fun to teach young minds (4th and 5th grades) about the importance of DNA tools for marine conservation! 🦈🧬

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Jordan Casey @jordancasey.bsky.social · 19/10/2023

Whale shark, the Maldive anemonefish, and a hawksbill sea turtle. The Maldives are spectacular!

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Simon J. Brandl @gobyone.bsky.social · 18/10/2023

We've received a slice of NOAA's actionable science fund. If you need me over the next 5 yrs or so, I'll be busy studying oyster reefs.. 🦪🐟🧪 Lots of scope for student training & collabs, so reach out! W @keishabahr.bsky.social, @jordancasey.bsky.social, @drelasmo.bsky.social & more! l1nq.com/qYKA6

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Casey Lab @thecaseylab.bsky.social · 05/10/2023

How do fish get their "daily vitamins" on nutrient-poor coral reefs? One way is by eating poop! 💩 🐟 Several recent studies involving Casey Lab members highlight the important, yet previously underappreciated role of fish poop as a nutrient source for reef critters! #VitaminSea A thread...

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Casey Lab @thecaseylab.bsky.social · 10/10/2023

How do invasive species impact coral reef food webs? A 2023 study led by Juan Pablo Lozano-Peña reveals that invasive #lionfishes have broader diets than native Caribbean mesopredator fishes. 🦁🐠 Link to publication: www.sciencedirect.com/science/arti... #isotopes #ecology #coralreef

A lionfish stares at the camera flaring its venomous spines

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Casey Lab @thecaseylab.bsky.social · 09/10/2023

Meet Ingrid! @ingridbunholi.bsky.social is a Casey Lab PhD student using #eDNA and #eRNA to investigate the effects of environmental and ecological variables on diverse aspects of coral reef fish diversity and distribution, from organismal to communities levels! 🧬🐠

Scientist Ingrid Bunholi uses an eDNA backpack to filter seawater for analysis in one photo, and is smiling in front of the ocean in a second photo.

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Ingrid Bunholi @ingridbunholi.bsky.social · 06/10/2023

Wrapping up my last day in Newcastle with this beautiful result of an intense week of work! The first ddRAD library pool of our little goby samples is ready for sequencing! 🧬🐠 I can't express how relieved I am...

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Ingrid Bunholi @ingridbunholi.bsky.social · 03/10/2023

Doing a PhD is such a comic (and bipolar) process… One day, you’re praying for it to end, and the next you’re taking a photo like that to register success in 1/5 steps of your lab protocol 😂 #phdlife

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Casey Lab @thecaseylab.bsky.social · 30/09/2023

We’re the Casey Lab at the University of Texas Marine Science Institute! Our lab investigates ecological processes shaping biodiversity patterns & trophic interactions in coastal marine ecosystems! We use the clues left behind in the form of DNA to understand the who, what, when, where & why! 🧬🐟

A photo of the Casey Lab team on the Texas coast

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Casey Lab @thecaseylab.bsky.social · 30/09/2023

Congrats to Casey Lab PhD Student @ingridbunholi.bsky.social on her publication synthesizing research methods across 300 eDNA and eRNA studies in aquatic community ecology! Check out the Open Access publication: onlinelibrary.wiley.com/doi/10.1002/... @jordancasey.bsky.social @txacsci.bsky.social

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Matthew A. Barnes @drbarnes.org · 29/09/2023

💔 Sad to hear of the passing of Louis Bernatchez this morning. Huge professional loss for the eDNA community, and huge personal loss for his many friends and colleagues 🧪🌎

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David Shiffman, Ph.D. 🦈 @whysharksmatter.bsky.social · 29/09/2023

Hello from the NYC museum of natural history subway stop! Did you know that more people are bitten by other people on the NYC subway every year than are bitten by sharks in the whole world? Sink your teeth into more shark facts with my book! www.press.jhu.edu/books/title/... 🧪🦑🦈😂

Me in front of a shark mural at the nyc subway

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Ingrid Bunholi @ingridbunholi.bsky.social · 29/09/2023

Hi! I’m Ingrid! I’m a PhD student at the University of Texas Marine Science Institute based in Port Aransas, Texas. I study levels of diversity within coral reef and coastal fish communities using a broad set of molecular tools, including eDNA, eRNA, pop genomics, and microbiome! 🧬🐠🦠

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Ingrid Bunholi @ingridbunholi.bsky.social · 29/09/2023

The first post here couldn't be more exciting... My first PhD paper is out in Environmental DNA! 🧬💧 It provides an accessible way to visualize methodological aspects and understand the current applications of eDNA/eRNA in community ecology! doi.org/10.1002/edn3... @jordancasey.bsky.social

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