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Emily Wong

@em6wong.bsky.social
551 followers 28 following 6 posts
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Reposted by Emily Wong
Dr Monique Ryan @mon4kooyong.bsky.social · 09/03/2026
More than 60% of Australian medical researchers left active research roles between 2019 & 2024 because they could not make ends meet - while my costings from the PBO suggest the govt could more than double annual spending from the MRFF without any effect on its base level of funding.
abc.net.au
Up to $1.4 billion in medical research remains unused under government cap
Researchers say securing funding has become increasingly tough, with many left with no choice but to spend a disproportionate amount of time applying for grants.
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Reposted by Emily Wong
Žiga Avsec @avsecz.bsky.social · 28/01/2026
AlphaGenome is out in @nature.com today along with model weights! 🧬 📄 Paper: www.nature.com/articles/s41... 💻 Weights: github.com/google-deepm... Getting here wasn’t a straight path. We discussed the story behind the model, paper & API in the following roundtable: youtu.be/V8lhUqKqzUc
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Reposted by Emily Wong
Kaessmann Lab @kaessmannlab.bsky.social · 29/01/2026
We are thrilled that our study on the evolution of gene regulation in mammalian cerebellum development – led by @ioansarr.bsky.social, @marisepp.bsky.social and @tyamadat.bsky.social, in collaboration with @steinaerts.bsky.social – is now out in @ScienceMagazine! www.science.org/doi/10.1126/...
science.org
The evolution of gene regulation in mammalian cerebellum development
Gene regulatory changes are considered major drivers of evolutionary innovations, including the cerebellum’s expansion during human evolution, yet they remain largely unexplored. In this study, we com...
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Reposted by Emily Wong
Stephen Turner @stephenturner.us · 14/01/2026
The Age of Academic Slop is Upon Us hegemon.substack.com/p/the-age-of...
hegemon.substack.com
The Age of Academic Slop is Upon Us
what happens when AI automates "normal science"?
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Reposted by Emily Wong
Jill Moore @moorejille.bsky.social · 07/01/2026
Our paper on the newest version of the Registry of candidate cis-Regulatory Elements (cCREs) is out 🧬 Huge thanks to the many collaborators, experimentalists, analysts and software developers who made this work possible — truly a team effort! A "meme-torial" of the science is coming soon 👀
nature.com
An expanded registry of candidate cis-regulatory elements - Nature
The existing ENCODE registry of candidate human and mouse cis-regulatory elements is expanded with the addition of new ENCODE data, integrating new functional data as well as new cell and tissue types...
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Emily Wong @em6wong.bsky.social · 20/12/2025
Latest from our lab: dx.plos.org/10.1371/jour... Congratulations to Veronika for leading this work to model cis-regulatory dynamics in F1s using single-cell allelic data
dx.plos.org
ASPEN: Robust detection of allelic dynamics in single cell RNA-seq
Author summary One powerful way to study regulation is to examine hybrids between two inbred species, where each gene has two distinct parental copies, or alleles. Measuring how much each allele is ex...
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Emily Wong @em6wong.bsky.social · 25/11/2025
New work from our lab: a simple motif-based model can distinguish between distal cell type specific regulatory elements with extremely high accuracy - in all metazoans including plants. www.nature.com/articles/s41...
nature.com
Motif-based models accurately predict cell type-specific distal regulatory elements - Nature Communications
Decoding cell identity from DNA alone is a challenge. Here, the authors demonstrate that counting transcription factor motifs in regulatory DNA can forecast cell-type specificity outperforming deep-le...
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Reposted by Emily Wong
Alex Stark @alex-stark.bsky.social · 18/11/2025
Major new direction in the lab: hacking human cell biology with pathogen effectors (eORFs) - amazing collaboration with @miketilapia.bsky.social lab. Huge congrats to first authors Tomas & He & all co-authors! Check out the pre-print on @biorxivpreprint.bsky.social www.biorxiv.org/content/10.1...
biorxiv.org
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Reposted by Emily Wong
Nir Eynon @nireynon.bsky.social · 03/09/2025
The power of Preprints. Our preprint "DNA Methylation Ageing Atlas Across 17 Human Tissues' www.researchsquare.com/article/rs-7... is a subject of a news piece in @nature.com How ageing changes our genes — huge epigenetic atlas gives clearest picture yet nature.com/articles/d41...
nature.com
How ageing changes our genes — huge epigenetic atlas gives clearest picture yet
A map of DNA methylation changes in human organs could help researchers to discover more targets for anti-ageing therapies.
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Reposted by Emily Wong
Mel Eckersley-Maslin @meleckmas.bsky.social · 16/11/2025
The Medical Research Future Fund (MRFF) funds medical research in Australia. Only half the funds have been released. If you're an Australian and able to vote please use the form below to email your local MP to release the full amount of the MRFF aamri.org.au/mrff/
aamri.org.au
Half the Funding. Half the Future. - AAMRI
The Medical Research Future Fund (MRFF) was designed to deliver $1 billion each year in new, lifesaving funding for medical research. We know through financial modelling that the full amount can be re...
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Reposted by Emily Wong
Hannah Long @hannahlong.bsky.social · 10/11/2025
📣 Paper alert! I am delighted that our paper exploring the impact of Neanderthal-derived variants on the activity of a disease-associated craniofacial enhancer has been published in Development today! journals.biologists.com/dev/article/...
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Reposted by Emily Wong
Magdalena Skipper @magdalenaskipper.bsky.social · 30/10/2025
In praise of fundamental research Our editorial this week argues that I n these financially straitened times, funders must recognize that great discoveries often arise from work that was looking for something completely different 🧪 @nature.com www.nature.com/articles/d41...
nature.com
From MRI to Ozempic: breakthroughs that show why fundamental research must be protected
In these financially straitened times, funders must recognize that great discoveries often arise from work that was looking for something completely different.
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Reposted by Emily Wong
dandergassen.bsky.social @dandergassen.bsky.social · 24/10/2025
Cracking the code of the non-coding genome via allele-specific genomics? Can we link non-coding elements—like lncRNAs and enhancers—to their protein-coding target genes, and in doing so, connect overlapping non-coding disease variants to their protein-coding counterparts?
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Reposted by Emily Wong
Rob Klose @robklose.bsky.social · 17/10/2025
Come join us in Geneva for everything epigenetics and gene regulation. It will be a great meeting! Please repost! www.keystonesymposia.org/conferences/...
keystonesymposia.org
Epigenetics and Gene Regulation in Health and Disease: Linking Basic Mechanisms with Therapeutic Opportunities | Keystone Symposia
Join us at the Keystone Symposia on Epigenetics and Gene Regulation in Health and Disease: Linking Basic Mechanisms with Therapeutic Opportunities, March 2026, in Geneva, with field leaders!
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Reposted by Emily Wong
The Francis Crick Institute @crick.ac.uk · 09/10/2025
We're now recruiting early career group leaders at the Crick to lead ambitious research programmes and explore bold scientific questions. Hear our Director, Edith Heard, explain why the Crick is a unique place for curiosity-driven research. Apply now ➡️ www.crick.ac.uk/careers-stud...
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Reposted by Emily Wong
Denis Duboule @denisduboule.bsky.social · 03/10/2025
Vertebrate Genome Evolution. Annual Symposium of the @louisjeantetfdn.bsky.social Foundation in Geneva. Free access on site and on line. Great speakers for a super interesting topic. #SvantePaabo #HenrikKaessmann organisers 🙏 See you there! @biology-unige.bsky.social @genevunige.bsky.social
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Reposted by Emily Wong
ralucagordan.bsky.social @ralucagordan.bsky.social · 03/10/2025
I'm very pleased to announce the official publication of our lab's paper "DNA mutagenesis driven by transcription factor competition with mismatch repair" in today's issue of Cell! www.cell.com/cell/abstrac...
cell.com
DNA mutagenesis driven by transcription factor competition with mismatch repair
Competition between transcription factors and mismatch repair machinery drives localized hypermutation at regulatory elements, with implications for cancer and genome evolution.
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Reposted by Emily Wong
Denis Jabaudon @djabaudon.bsky.social · 19/09/2025
Ever wondered how robust cellular identity is to external perturbations? Here we disrupt cellular environmnent in vivo and in vitro, and find cell population specific sensitivities. Environment sculpts development yes, but not all cells are made of the same wood. www.science.org/doi/10.1126/...
science.org
Cell-extrinsic controls over neocortical neuron fate and diversity
Cell-extrinsic cues are key for neocortical cell identity and diversity.
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Reposted by Emily Wong
Daniel Medina-Cano @danielmedinacano.bsky.social · 27/08/2025
I'm really happy to announce that my two main postdoctoral works have been published in the same issue of Developmental Cell! First, the final form of the mouse cortical organoid protocol (tinyurl.com/bddfmx8n), which I recently presented at Development presents (tinyurl.com/36udcpme) and…
tinyurl.com
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Emily Wong @em6wong.bsky.social · 28/08/2025
Congrats to Tommy and team, especially to PhD student Veronika Petrova who led the work on our end. Great to see it out! @victorchang.edu.au
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Reposted by Emily Wong
Axel Visel @axelvisel.bsky.social · 18/06/2025
Textbooks: “Enhancers are just a bunch of TFBSs” But how do they REALLY work? New paper with many contributors here @berkeleylab.lbl.gov, @anshulkundaje.bsky.social, @anusri.bsky.social A 🧵 (1/n) Free access link: rdcu.be/erD22
A meme-style comic panel with three parts. Left: A stylized enhancer with a mutation, surrounded by colored blocks representing functional motifs, a neural network diagram, chromatin accessibility signal traces, and a sequence motif. Two cartoon mouse embryos below show different LacZ reporter activity patterns. Top right: A hand hovers anxiously between two red buttons labeled “Experiments” and “AI,” with the caption “HOW DO ENHANCERS REALLY WORK?” Bottom right: A sweating superhero wipes his forehead, looking stressed about the difficult choice.
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Reposted by Emily Wong
Richard Sever @richardsever.bsky.social · 23/05/2025
Non-profit journals are on the critical list. The cause: academics obsession with the Nature brand, coupled with the APC $ model. Some will argue it doesn’t matter (“all as bad as each other”). But the fact is undeniable and it’s good guys who put money back into science like COB who are losing..
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Reposted by Emily Wong
Ben Hogan @benjhogan.bsky.social · 21/03/2025
A group leader position is open at Peter Mac in Melbourne, Australia! Join us! Applications until May 5. 👇👇 www.nature.com/naturecareer...
nature.com
Group Leader - Melbourne (Suburb), Greater Melbourne (Inner) (AU) job with Peter MacCallum Cancer Centre | 12837590
Peter Mac is recruiting a Group Leader to increase the capacity and efficiency of our “discovery to translation” cancer research pipeline.
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