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Francesca Ciccarelli

@ciccarellilab.bsky.social
596 followers 394 following 52 posts

We study the drivers of cancer evolution from initiation to response to therapy. We are part of the Centre for Cancer Evolution at Barts Cancer Institute and the Francis Crick Institute in London, UK. Posts from Francesca

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Francesca Ciccarelli @ciccarellilab.bsky.social · 17/12/2025
Happy season break from our lab! ♥️ @ameachasag.bsky.social @pedrandrei.bsky.social @emmataggart.bsky.social
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Francesca Ciccarelli @ciccarellilab.bsky.social · 05/12/2025
A stunning view of Turin and the Alps #bellaitalia
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Francesca Ciccarelli @ciccarellilab.bsky.social · 13/11/2025
Enjoying my time @theaacr.bsky.social KCA joint conference on Cancer Precision Medicine in beautiful Busan, Korea
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Francesca Ciccarelli @ciccarellilab.bsky.social · 08/10/2025
First time I give a talk literally in a football stadium 😎⚽️
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Francesca Ciccarelli @ciccarellilab.bsky.social · 07/10/2025
Beautiful Bilbao
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Francesca Ciccarelli @ciccarellilab.bsky.social · 01/10/2025
Our first Centre for Cancer Evolution PI retreat! A wonderful day at Goodenough House discussing science, strategy and forging new collaborations @qmbci.bsky.social
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Francesca Ciccarelli @ciccarellilab.bsky.social · 01/10/2025
Great science and good fun at the faculty retreat of the Centre for Cancer Evolution @qmbci.bsky.social. Here @stuartmcdonald.bsky.social explaining his big question!
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Francesca Ciccarelli @ciccarellilab.bsky.social · 15/08/2025
Peaceful early morning
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Francesca Ciccarelli @ciccarellilab.bsky.social · 03/07/2025
Midsummer night 🌟🌙
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Francesca Ciccarelli @ciccarellilab.bsky.social · 14/06/2025
This is an important milestone: mutagenic drugs can increase TMB and induce a dMMR-like genetic profile, but do not improve response to immunotherapy in pMMR CRC patients. Some evidence of TIME remodelling, but likely not in the direction needed fro response... www.sciencedirect.com/science/arti...
sciencedirect.com
Induction of a mismatch repair deficient genotype by tailored chemical mutagenesis in experimental models of cancer
Mismatch repair deficient (MMRd) tumors harbor thousands of somatic mutations enriched for insertion–deletion (indels) conferring high sensitivity to …
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Francesca Ciccarelli @ciccarellilab.bsky.social · 28/05/2025
Great meeting and great questions! Thanks for inviting me!
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Francesca Ciccarelli @ciccarellilab.bsky.social · 27/05/2025
Our very own @mirjana-efremova.bsky.social (very small compared to the very huge screen) speaking about her beautiful data on cell plasticity in cancer mets at the #Beatson International Cancer Conference. @qmbci.bsky.social @cruk-mi.bsky.social
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Francesca Ciccarelli @ciccarellilab.bsky.social · 22/05/2025
La Caixa panel dinners are always a treat! View of Barcelona from the museum of Catalan art
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Francesca Ciccarelli @ciccarellilab.bsky.social · 15/05/2025
I spent two days meeting students and faculty & delivering the keynote speech at the London Health Research Day @westernu.bsky.social. I truly enjoyed the enthusiasm and genuine engagements of the young generation of cancer researchers! Thanks @ggloor.bsky.social & colleagues for inviting me!
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Francesca Ciccarelli @ciccarellilab.bsky.social · 14/05/2025
Street crossing in London, ON 🦆🦆🦆
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Francesca Ciccarelli @ciccarellilab.bsky.social · 11/05/2025
Gorgeous day in NYC
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Francesca Ciccarelli @ciccarellilab.bsky.social · 07/03/2025
Familiar faces in Belfast! Enjoyable time at the meeting of the Irish Association for Cancer Research! @qmbci.bsky.social
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Francesca Ciccarelli @ciccarellilab.bsky.social · 05/03/2025
Next Thu 13th March Ilaria Malanchi @ila07.bsky.social and I will host the next "Medicine at the Crick" event focusing on how tissues evolve over time and why this may initiate disease. Free in person/virtual registration @crick.ac.uk: www.eventbrite.co.uk/e/medicine-a...
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Reposted by Francesca Ciccarelli
Donald Tusk @donald-tusk.bsky.social · 28/02/2025
Dear Volodymyr Zelenskyy, dear Ukrainian friends, you are not alone.
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Francesca Ciccarelli @ciccarellilab.bsky.social · 19/02/2025
We have two open positions for #computationalbiologists to work on: 1. Early cancer initiation following our work in #NatureCancer (Ref 5028) 2. Response to cancer immunotherapy following our work in #CancerCell (Ref 5073) To apply use the provided reference numbers: www.qmul.ac.uk/jobs/vacanci...
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Francesca Ciccarelli @ciccarellilab.bsky.social · 11/02/2025
Beautiful cover 😍 from an idea of our own @pedrandrei.bsky.social! Credits to Joe Brock from @crick.ac.uk
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Francesca Ciccarelli @ciccarellilab.bsky.social · 04/02/2025
Very timely publication on World Cancer Day and spot on title considering the times we live in. I am very proud of all wonderful colleagues that dedicate their talent to understand, treat and eventually cure cancer @qmbci.bsky.social 💪💪💪
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Reposted by Francesca Ciccarelli
Alastair Lamb @lambalastair.bsky.social · 29/01/2025
Really enjoyed @mirjana-efremova.bsky.social talk on phenotypic plasticity in #ColorectalCancer Super clear explanation of role of key genes ( #LRIG1 etc) in cell switch @qmbci.bsky.social @ciccarellilab.bsky.social @drtanyasoliman.bsky.social @mcclellandlab.bsky.social @sibucz.bsky.social
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Reposted by Francesca Ciccarelli
Alastair Lamb @lambalastair.bsky.social · 29/01/2025
Cool to be at #FoG2025 @fogenomics.bsky.social A bit more #SpatialGenomics content this year which is great! Surprise visit from #Darth & #Chewbacca! @ciccarellilab.bsky.social @mirjana-efremova.bsky.social @karlsmithbyrne.bsky.social @qmbci.bsky.social @omaiques.bsky.social
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Francesca Ciccarelli @ciccarellilab.bsky.social · 28/01/2025
Great talk from Hrvoje Misetic on the context dependent role of Cdkn2a in cancer evolution @qmbci.bsky.social @cruk-cityoflondon.bsk.social. Well done 👏💪👌
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Francesca Ciccarelli @ciccarellilab.bsky.social · 28/01/2025
Nathaniel MonPere from @benjaminwerner.bsky.social lab in the Centre for Cancer Evolution @qmbci.bsky.social modelling #clonalhaematopoiesis in ageig at the Annual Symposium of @cruk-cityoflondon.bsky.social
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Francesca Ciccarelli @ciccarellilab.bsky.social · 25/01/2025
With Ilaria Malanchi @ila07.bsky.social we will host the #MedicineattheCrick event (13th March at the Crick @crick.ac.uk.) Join world experts to discuss how early mutant cells interact with surrounding niche to maintain homeostasis or start cancer. Free registration! Details in the poster 👇
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Francesca Ciccarelli @ciccarellilab.bsky.social · 24/01/2025
Strong Barts representation at the Cancer Research Nottingham Annual Symposium! @francesbalkwill.bsky.social @qmbci.bsky.social @uniofnottingham.bsky.social
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Reposted by Francesca Ciccarelli
Christian Frezza @frezzalab.bsky.social · 23/01/2025
Hi all, our lab will soon recruit a PhD student working within a very exciting MSCA Horizon Doctoral network working on ageing, UNION, which gathers some fantastic scientists. Please apply if your profile fits our project (see attached advert). Looking forward to working with you!
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Francesca Ciccarelli @ciccarellilab.bsky.social · 16/01/2025
New paper from our lab just out in @cp-cancercell.bsky.social! Integrating spatial omics, cell co-cultures and staining of clinical trial samples, we show that CD74 marks the right local microenvironment for #immunotherapy response. Excitingly, this may increase the number of treatable patients!
sciencedirect.com
A constitutive interferon-high immunophenotype defines response to immunotherapy in colorectal cancer
Fewer than 50% of metastatic deficient mismatch repair (dMMR) colorectal cancer (CRC) patients respond to immune checkpoint inhibition (ICI). Identify…
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Francesca Ciccarelli @ciccarellilab.bsky.social · 14/01/2025
Sunrise in Islington
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Francesca Ciccarelli @ciccarellilab.bsky.social · 09/01/2025
Nature Research Briefing asked us to explain our recent discovery (rdcu.be/d5pty) to a wider readership. The piece includes a comment from an external expert (thanks #StephenMeltzer, at #JohnHopkins!) and some "behind the paper" curiosities... www.nature.com/articles/s43...
nature.com
Effects of CDKN2A loss on evolution of esophageal adenocarcinoma depend on context and time - Nature Cancer
Loss of CDKN2A is known to drive the progression of several cancers, including esophageal adenocarcinoma (EAC). Genetic analyses of samples of Barrett’s esophagus (EAC precursor condition) show that e...
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Francesca Ciccarelli @ciccarellilab.bsky.social · 06/01/2025
Welcome @lambalastair.bsky.social to our Centre for Cancer Evolution @qmbci.bsky.social! Looking forward to delivering great science for the benefit of prostate cancer patients! 💪💪💪
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Francesca Ciccarelli @ciccarellilab.bsky.social · 05/01/2025
A solved physics mystery that @barrallab.bsky.social will love! 😂😂😂 arxiv.org/pdf/2501.00536
arxiv.org
Phase behavior of Cacio and Pepe sauce
"Pasta alla Cacio e pepe" is a traditional Italian dish made with pasta, pecorino cheese, and pepper. Despite its simple ingredient list, achieving the perfect texture and creaminess of the sauce can ...
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Francesca Ciccarelli @ciccarellilab.bsky.social · 04/01/2025
Much awaited reunion with @francicapon.bsky.social who recently moved her lab to Vancouver. @ffrancafrat.bsky.social
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Francesca Ciccarelli @ciccarellilab.bsky.social · 03/01/2025
Best start of 2025: our study on the dual role of CDKN2A in cancer evolution (rdcu.be/d5pty) is out in @naturecancer.bsky.social! Big thanks to Piyali Ganguli who led it, all coauthors and @cancerresearchuk.org archuk.org @crick.ac.uk @qmbci.bsky.social bci.bsky.social for support! Summary below
rdcu.be
Context-dependent effects of CDKN2A and other 9p21 gene losses during the evolution of esophageal cancer
Nature Cancer - Ganguli et al. show that CDKN2A loss in Barrett’s esophagus prevents esophageal adenocarcinoma initiation by counterselecting subsequent TP53 loss and report context-dependent...
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Francesca Ciccarelli @ciccarellilab.bsky.social · 03/12/2024
Great talk @kamatlab.bsky.social and welcome to 🦋! #ICSB2024
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Francesca Ciccarelli @ciccarellilab.bsky.social · 02/12/2024
Who said computational biology is boring? Traditional Indian dance at #icsb2024
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Francesca Ciccarelli @ciccarellilab.bsky.social · 02/12/2024
@stemcellsystems.bsky.social showing the effort of her lab in unifying and integrating macrophage gene expression data to produce an atlas of human myeloid compartment. Stemformatics.org #icsb2024 #iitbombay
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Francesca Ciccarelli @ciccarellilab.bsky.social · 01/12/2024
First day just ended with a glorious reception dinner! Excellent organisation and very lively scientific discussion! #icsb2024 #iitbombay
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Reposted by Francesca Ciccarelli
Chris Wells @stemcellsystems.bsky.social · 01/12/2024
5/5 @ciccarellilab.bsky.social shows that tumour suppressor genes such as CDKN2A can select against P53 loss. Context of loss of CDKN2A determines cancer evolution and prognosis @biorxivpreprint.bsky.social www.biorxiv.org/content/10.1... #ICSB2024 #SystemsOncology
biorxiv.org
Context-dependent effects of CDKN2A and other 9p21 gene losses during the evolution of oesophageal cancer
CDKN2A is a tumour suppressor located in chromosome 9p21 and frequently lost in Barrett’s oesophagus (BO) and oesophageal adenocarcinoma (OAC). How CDKN2A and other 9p21 gene co-deletions affect OAC e...
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Reposted by Francesca Ciccarelli
Chris Wells @stemcellsystems.bsky.social · 01/12/2024
3/5 @ciccarellilab.bsky.social is interested in the transition between driver mutation in a somatic cell, and probabilistic transition to cancer. genomemedicine.biomedcentral.com/articles/10.... #ICSB2024 #SystemsOncology
genomemedicine.biomedcentral.com
Mechanistic insights into the interactions between cancer drivers and the tumour immune microenvironment - Genome Medicine
Background The crosstalk between cancer and the tumour immune microenvironment (TIME) has attracted significant interest in the latest years because of its impact on cancer evolution and response to t...
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Reposted by Francesca Ciccarelli
Chris Wells @stemcellsystems.bsky.social · 01/12/2024
@ciccarellilab.bsky.social gives the Plenary for the #ICSB2024 cancer system’s biology session. She introduces the cancer evolution model, with a compendium of cancer driver mutations genomebiology.biomedcentral.com/articles/10.... 1/5
genomebiology.biomedcentral.com
Comparative assessment of genes driving cancer and somatic evolution in non-cancer tissues: an update of the Network of Cancer Genes (NCG) resource - Genome Biology
Background Genetic alterations of somatic cells can drive non-malignant clone formation and promote cancer initiation. However, the link between these processes remains unclear and hampers our underst...
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Reposted by Francesca Ciccarelli
Barral Lab @barrallab.bsky.social · 24/11/2024
Our first 🦋 post! Very happy to share our latest paper just out in Cell Reports, exploring the crosstalk between immune and epithelial cells in the gut. Check it out! @vivianlilab.bsky.social @kingscollegelondon.bsky.social www.cell.com/cell-reports...
cell.com
IFN-γ-dependent regulation of intestinal epithelial homeostasis by NKT cells
The crosstalk between immune and epithelial cells is vital to maintain intestinal homeostasis. Lebrusant-Fernandez et al. identify NKT cells in the small intestine as key regulators of epithelial biol...
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Francesca Ciccarelli @ciccarellilab.bsky.social · 01/12/2024
This is my first post written in the blu sky! What a better start than from IIT in Mumbai where i am attending the 23rd International Conference of Systems Biology that just started today! Looking forward for a week of great science!
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