Sign in

Christian Loyo

@christianloyo.bsky.social
578 followers 253 following 21 posts

Postdoc at Fred Hutch | MIT Biology PhD 🦫 | UW-Madison Alum 🧀 | Interested in all things microbes! | Chicano 🇺🇸🇲🇽 | He/Him

PostsRepliesMedia
Reposted by Christian Loyo
Saria McKeithen-Mead, PhD @sciria.bsky.social · 05/10/2026
Pleased to share my first preprint from my postdoc, where I ask what drives mobile DNA movement between bacterial cells in complex communities like the gut microbiome. To answer this, we built a way to capture mobile DNA in the act of moving between cells, using short-read metagenomics. 🧵
doi.org
23517
Christian Loyo @christianloyo.bsky.social · 02/10/2026
"most [young scientists] have never experienced a payline above 12% or tasted a chloroform-isoamyl alcohol mixture, and I genuinely do not know which of those losses is more devastating." Easily the best thing I've read this week inpreparation.substack.com/p/opinion-re...
inpreparation.substack.com
Opinion: I Miss When The NIH Payline Was 40% And We All Mouth-Pipetted Phenol
By Dr. Douglas R. Waverly, Professor Emeritus of Biochemistry, Yale University
0143
Reposted by Christian Loyo
Richard Sever @richardsever.bsky.social · 31/01/2026
Nature and Science journalists denied entry to event featuring NIH Director
4345154
Christian Loyo @christianloyo.bsky.social · 02/01/2026
Excited to share more about the SpbK anti-phage defense system, with experiments that shed light on the mechanism by which SpbK exhibits NADase activity in response to phage infection. Grateful to have been a part of this collaboration led by Biswa Mishra and Thomas Ve! rdcu.be/eXlod
rdcu.be
Molecular characterisation of the Bacillus subtilis SpbK antiphage defence system
Nature Communications - SpbK protects Bacillus subtilis from phage infection by depleting NAD⁺. In this study, the authors uncover the molecular mechanisms underlying SpbK’s self...
050
Reposted by Christian Loyo
bioRxiv Microbiology @biorxiv-microbiol.bsky.social · 18/12/2025
Metaplasia Enables Stomach Colonization by Fusobacterium animalis www.biorxiv.org/content/10.64898/20…
033
Reposted by Christian Loyo
Fred Hutch Basic Sciences Division @basicsci.fredhutch.org · 10/10/2025
Friday Afternoon Seminars are back! Kicking things off are @pravrutharaman.bsky.social from the @harmitmalik.bsky.social Lab and @christianloyo.bsky.social from Human Biology’s Salama Lab. Can’t wait to see everyone today at 4:00 pm in Pelton for two great talks!
Friday Afternoon Seminars (FAS), this Friday 10/10 at 4pm in Pelton.
 
Pravrutha Raman, Malik Lab
Beyond histone mimicry: evolution of EZHIP, an inhibitor of the Polycomb Repressive Complex 2 in mammals
 
Christian Loyo, Salama Lab
Adaptive benefits of mobile genetic elements in bacteria
131
Reposted by Christian Loyo
Wiep Klaas Smits (ExpBac/CMAT) @smitslab.bsky.social · 09/09/2025
Widespread purine bias in bacterial genes driven by runaway transcription - www.biorxiv.org/content/10.1...
biorxiv.org
Widespread purine bias in bacterial genes driven by runaway transcription
Genes in many bacteria are rich in purine nucleotides and poor in pyrimidines. We show that this purine preference is critical for gene expression because it prevents premature transcription terminati...
042
Reposted by Christian Loyo
Nature Ecology & Evolution @natecoevo.nature.com · 27/08/2025
Combination of large-scale phylogenomic analysis, mouse lethality experiments and bacterial growth assays shows sheds light on how a pandemic clone of Vibrio parahaemolyticus was able to spread worldwide www.nature.com/articles/s41...
nature.com
Wave succession in the pandemic clone of Vibrio parahaemolyticus driven by gene loss - Nature Ecology & Evolution
A combination of large-scale phylogenomic analysis, mouse lethality experiments and bacterial growth assays shows that gene loss in the putrescine utilization pathway has enhanced biofilm formation an...
01810
Christian Loyo @christianloyo.bsky.social · 16/05/2025
When I started my postdoc a little over a month ago, I expressed worry to my PI about the loss of funding opportunities from the federal government to which she countered saying that "maybe the private fellowships will invest more deeply." Seems that won't be the case.
061
Christian Loyo @christianloyo.bsky.social · 18/04/2025
I will miss working with B. subtilis, but I adore observing Helicobacter pylori squiggle under the microscope and see their distinct helical shape. I could just sit here all day and watch them!
020
Christian Loyo @christianloyo.bsky.social · 16/04/2025
Love seeing science tattoos and showing off my own 😁 my first was a DNA helix, because it’s my favorite molecule, and second was a microscope/sun, an homage to my first microscope that used sunlight as a light source and helped fuel my curiosity for biology.
Tattoos of a DNA helix and a Sun/Microscope on an arm
240
Reposted by Christian Loyo
Carolyn Bertozzi @carolynbertozzi.bskyverified.social · 04/04/2025
This article does a great job describing the lives of young American scientists: “You roll up your sleeves, try to make or discover something useful and then let the scientific community try to punch holes in your work to make sure that it’s sound”
18934
Christian Loyo @christianloyo.bsky.social · 03/04/2025
Excited to share that my first first author paper from grad school is up now at PLOS Genetics @plos.org! dx.plos.org/10.1371/jour...
dx.plos.org
A phage-encoded counter-defense inhibits an NAD-degrading anti-phage defense system
Author summary Bacterial viruses (bacteriophages or phages) are widespread and abundant across the planet. Bacteria have a variety of immune systems, often found on mobile genetic elements, to combat ...
2115
Reposted by Christian Loyo
Krystal Tsosie @kstsosie.bsky.social · 28/03/2025
By age 24, I patented a cancer device, interned at top medical centers, was accepted to a university known for Nobel Laureates. Yet, being Navajo, I felt the disconnect of being a scientist vs an object of study. I am not a product of DEI. I persevered despite science ictnews.org/news/databac...
ictnews.org
‘DataBack’: The fight for genomic data sovereignty
Arizona scientist wants more transparency and equity from researchers in the handling of Indigenous DNA
48016
Reposted by Christian Loyo
José R Penadés @jrpenades.bsky.social · 27/03/2025
If you are interested in phage satellites, we hope you'll enjoy this. Fun collaboration with the Rocha, Seed, Bikard, and Chen labs! rdcu.be/efkvG
rdcu.be
Genetics, ecology and evolution of phage satellites
Nature Reviews Microbiology - In this Review, Penadés et al. explore the genetics, potential origins and life cycle of phage satellites, and they discuss the impact of these elements on the...
05319
Reposted by Christian Loyo
bioRxiv Microbiology @biorxiv-microbiol.bsky.social · 20/02/2025
An antisense RNA regulates production of DnaA and affects sporulation in Bacillus subtilis www.biorxiv.org/content/10.1101/202…
034
Reposted by Christian Loyo
Dr. Kat Napaaqtuk❄️ @napaaqtuk.bsky.social · 02/02/2025
@asm.org this better not be anticipatory obedience. I have 5 lab members planning on going to ASM microbe this year. I will absolutely pivot to another meeting if ASM gives in to anti-DEI efforts.
14508126
Reposted by Christian Loyo
Cecilia Noecker @cecilianoecker.bsky.social · 02/02/2025
ASM website screenshots from the wayback machine in December '24 (web.archive.org/web/20241211...) vs today. Pretty disappointing!! 🧪
Screenshot from an archived web page, reads: "
Guiding Principles

Our guiding principles provide unwavering guidance for equity and inclusion efforts and serve to communicate core values:

    Diversity Is an Asset—A diverse ASM enhances the microbial sciences, increases innovation, strengthens the community and sustains the profession.
    Diverse Leadership—ASM empowers individuals with diverse perspectives in decision-making processes.
    Transparency—ASM ensures equitable access and accountability through transparent procedures and communication.
    Community Building—ASM attracts, supports and develops the community, ensuring that all are empowered and engaged in the work of the organization.
"Screenshot from current ASM IDEAA web page, reads: "Under Review

The page you have tried to access is currently under review as we evaluate the new Executive Orders."
64626
Reposted by Christian Loyo
bioRxiv Microbiology @biorxiv-microbiol.bsky.social · 29/01/2025
Identification of insertion sites for the integrative and conjugative element Tn916 in the Bacillus subtilis chromosome www.biorxiv.org/content/10.1101/202…
033
Reposted by Christian Loyo
Saria McKeithen-Mead, PhD @sciria.bsky.social · 26/01/2025
I'm excited to share that my third first-author publication from grad school has been published in JBAC: doi.org/10.1128/jb.0...
journals.asm.org
Activation and modulation of the host response to DNA damage by an integrative and conjugative element | Journal of Bacteriology
Bacterial genomes typically contain mobile genetic elements, including bacteriophages (viruses) and integrative and conjugative elements, that affect host physiology. ICEs can excise from the chromoso...
1162
Reposted by Christian Loyo
bioRxiv Microbiology @biorxiv-microbiol.bsky.social · 09/01/2025
DefensePredictor: A Machine Learning Model to Discover Novel Prokaryotic Immune Systems www.biorxiv.org/content/10.1101/202…
077
Christian Loyo @christianloyo.bsky.social · 23/12/2024
Excited to share that my graduate work is up on bioRxiv! I found that some SPβ-like phages of B. subtilis have a counter-defense system that inhibits NADase activity from the SpbK anti-phage defense during phage infection and activation of SpbK.
1104
Christian Loyo @christianloyo.bsky.social · 22/12/2024
Finally #PhDone! So grateful for my research mentors and all the amazing people I met at MIT that helped me be a better scientist.
Image of myself and my PhD Advisor in front of a sign saying “Congratulations Dr. Loyo”
1140
Christian Loyo @christianloyo.bsky.social · 02/12/2024
Thesis submitted to my committee! 🎉🥳 I’m still in disbelief that my thesis defense is only two weeks away
040
Reposted by Christian Loyo
Ákos T Kovács @evolvedbiofilm.bsky.social · 19/11/2024
Bacillus on the Blue place, starting small, but hopefully extending to keep the conversation active [it was also gorwing slow on Twitter] go.bsky.app/BfusVyD
63218
Christian Loyo @christianloyo.bsky.social · 11/11/2024
The last couple days I’ve had a number of new followers and folks from Twitter find me here, so I think it’s time I (re)introduce myself. My name is Christian and I’m finishing my PhD in Alan Grossman’s lab at MIT studying antiphage defense and counter-defense in B. subtilis
Image of myself in front of a sign at the SACNAS national diversity in STEM conferenceImage of myself with Tim the Beaver, the MIT mascotImage of phage lysis of bacteria in the shape of a smiley face on a petri dish
140
Reposted by Christian Loyo
bioRxiv Microbiology @biorxiv-microbiol.bsky.social · 06/09/2024
Transcription termination and antitermination are critical for the fitness and function of the integrative and conjugative element Tn916 www.biorxiv.org/content/10.1101/202…
biorxiv.org
Transcription termination and antitermination are critical for the fitness and function of the integrative and conjugative element Tn916 https://www.biorxiv.org/content/10.1101/2024.09.05.611371v1
Premature expression of genes in mobile genetic elements can be detrimental to their bacterial hosts
011
Christian Loyo @christianloyo.bsky.social · 25/03/2024
Anti-viral defense in Archaea! I saw this work presented at the SACNAS Conference a couple months ago and had the pleasure to meet Luis and chat MGEs with him. Really excited to see Luis' work out on BioRxiv now!
131
Reposted by Christian Loyo
bioRxiv Microbiology @biorxiv-microbiol.bsky.social · 21/03/2024
Analysis and culturing of the prototypic crAssphage reveals a phage-plasmid lifestyle www.biorxiv.org/content/10.1101/202…
biorxiv.org
Analysis and culturing of the prototypic crAssphage reveals a phage-plasmid lifestyle https://www.biorxiv.org/content/10.1101/2024.03.20.585998v1
The prototypic crAssphage (Carjivirus communis) is one of the most abundant, prevalent, and persiste
024
Christian Loyo @christianloyo.bsky.social · 07/03/2024
I could watch the simulations of DNA getting packaged into a phage head all day. Really cool work. www.nature.com/articles/s41...
nature.com
The structure and physical properties of a packaged bacteriophage particle - Nature
Multiresolution computational simulations generate all-atom models of a complete packaged virus particle.
010
Reposted by Christian Loyo
Drew Bridges @bridgesbio.bsky.social · 06/03/2024
Our first paper from the lab! We find that upon exposure to lytic phages, the pathogen V. cholerae rapidly lyses, but then recovers, with surviving cells exhibiting robust biofilm formation. www.nature.com/articles/s41... (1/4)
0169
Reposted by Christian Loyo
Aaron Whiteley @aaronwhiteley.bsky.social · 01/03/2024
Our review comparing bacterial and eukaryotic immune systems is out now. Check out Hannah’s thread for the highlights! www.nature.com/articles/s41...
nature.com
Conservation and similarity of bacterial and eukaryotic innate immunity - Nature Reviews Microbiology
In this Review, Ledvina and Whiteley highlight the key similarities between eukaryotic and bacterial innate immune systems, exploring conserved immune components and signalling strategies, as well as ...
14121
Reposted by Christian Loyo
Peter Chien @chienlab.bsky.social · 01/03/2024
The 2024 GRC Microbial Stress meeting program is live and we have some blazin' folks - should be a little bit of something for everyone. The conference is usually oversubscribed, so please register early! Hit me up with any ?s! www.grc.org/microbial-st... #MicroSky
222
Christian Loyo @christianloyo.bsky.social · 23/02/2024
A phage encodes a defense system that defends against itself and others but encodes a counter-defense too, so it can still propagate while blocking other phage from doing so. Really cool stuff! www.nature.com/articles/s41...
020
Reposted by Christian Loyo
Eduardo Rocha @epcrocha.bsky.social · 21/02/2024
Our latest on phage-plasmids(PP) is out! Two main findings. PP recombine more with (other) plasmids and phages than the latter, thereby connecting them. PP can become just phages or plasmids, which may then transition to be conjugative. All the world’s an MGE! www.nature.com/articles/s41...
03132
Christian Loyo @christianloyo.bsky.social · 08/02/2024
Hi BlueSky! This is my first post since making the switch over. Naturally I thought I'd make it a phage post showing off my agar art skills(?) and a clear plaque mutant I isolated from a temperate phage I'm working with.
0152