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Ching-Jung Lin

@chjlin.bsky.social
119 followers 273 following 18 posts

🏠Taiwan 🪱 Worm Doctoral Candidate, UC Davis - Plant Pathology & Biotechnology 🔬 🧬 🧠 Molecular Plant-Microbe Interactions, Nematology, Plant Biology, Biotechnology 🏡 nemaplant.org

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Ching-Jung Lin @chjlin.bsky.social · 24/03/2026
onlinelibrary.wiley.com/doi/10.1111/...
onlinelibrary.wiley.com
Plant cell surface receptors
Plant cell surface receptors have evolved to perceive peptides, proteins, glycans, lipids, and small molecules through diverse ectodomains, integrating these inputs into distinct physiological output...
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Reposted by Ching-Jung Lin
Nature Plants @natplants.nature.com · 24/03/2026
New Article: "Rice false smut fungus hijacks rice lipid signalling to manipulate floret development and immunity" rdcu.be/e9Dlf Fungus disrupts floret development and suppresses immunity by secreting the effector Sxp1, which targets a lipid transfer protein. #PlantScience
Final model in the paper.
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Ching-Jung Lin @chjlin.bsky.social · 21/03/2026
onlinelibrary.wiley.com/doi/full/10....
onlinelibrary.wiley.com
Virus‐induced gene editing of stomatal regulators in Nicotiana benthamiana enables rapid functional genomics
We present a rapid method for functional genomics using a tobacco rattle virus-based gene editing platform. This platform enables both somatic and heritable editing of stomatal regulators in Nicotian....
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Ching-Jung Lin @chjlin.bsky.social · 27/02/2026
onlinelibrary.wiley.com/doi/pdf/10.1...
onlinelibrary.wiley.com
Plant Peptides on the Rise: From Historical Insight to Future Applications
Plant peptides constitute a rapidly expanding class of signalling molecules essential to plant physiology, mediating key processes such as development, stress adaptation, and immune responses. This r....
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Reposted by Ching-Jung Lin
EMBO @embo.org · 14/11/2025
Apply now for EMBO Workshop "Evolving together: From #genomics to biological interactions" in Taipei, Taiwan, 24–27 Apr 2026. Abstract submission/Registration deadline: 20 Jan/28 Feb 2026 meetings.embo.org/event/26-bio... #EMBOEvoGenBio #GeneSky #EvoSky #EcoSky #EMBOevents 🧪
meetings.embo.org
Evolving together: from genomics to biological interactions
Genomic and evolutionary research has transformed our understanding of how biological interactions shape life’s diversity. From symbiosis and host–pathogen relationships to competition, cooperation, …
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Ching-Jung Lin @chjlin.bsky.social · 12/09/2025
www.nature.com/articles/s41...
nature.com
Conserved immunomodulation and variation in host association by Xanthomonadales commensals in Arabidopsis root microbiota - Nature Plants
The authors show that immunosuppression is highly conserved in the bacterial order Xanthomonadales. This feature, which preceded their specialization as host-adapted pathogens, probably contributes to...
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Ching-Jung Lin @chjlin.bsky.social · 08/08/2025
A meaningful moment in my plant pathology journey, fueled by my passion for nematology, bacteriology, and biotech. Grateful for support from UCD Plant Pathology, APS, industry partners, and especially the guidance and lab support from Drs. Shahid Siddique & Gitta Coaker. #PlantHealth2025 🪱🦠🌱🌺
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Ching-Jung Lin @chjlin.bsky.social · 04/08/2025
I'm deeply thankful to APS for the Travel Award and to my advisor and lab for their support. This encouragement means a lot and inspires me to keep learning and sharing with the community.
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American Phytopathological Society (APS) @plantdisease.bsky.social · 03/08/2025
Snapshots from yesterday's APS Gives Back: Native Roots Volunteer Experience field trip. Thank you volunteers! #PlantHealth2025
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Tianrun Jerry Li @jerrytli.bsky.social · 29/07/2025
It’s my great honor to be part of this project and happy to see this part of my thesis work finally out in Nature Plants!
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Reposted by Ching-Jung Lin
Buck Samuel 🪱🦠🧬🔬 @microbeminded.bsky.social · 30/06/2025
Amazing talk (and videos) in plenary 2 from Xiangyi Ding ( @danstarrucdavis.bsky.social ) about biophys constraints in cytoplasm. #Celegans cytoplasm is more like jelly than honey (human cells), plus found gene that constrains this mess particle diffusion. #worm25 www.biorxiv.org/content/10.1...
biorxiv.org
Giant KASH proteins and ribosomes synergistically establish cytoplasmic biophysical properties in vivo
Understanding how cells control their biophysical properties during development remains a fundamental challenge. While cytoplasmic macromolecular crowding affects multiple cellular processes in single...
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Reposted by Ching-Jung Lin
Buck Samuel 🪱🦠🧬🔬 @microbeminded.bsky.social · 01/07/2025
Inspirational talk from Pam Padilla highlighting ways to broaden impact of our research to broader communities. #worm25

Strategy to Broaden Impact:
> Communication research impact
> Engage with political representatives
> Advocate for higher education
> Counter misinformation
> Assign high value to teaching
› Engage with diverse communities
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Ching-Jung Lin @chjlin.bsky.social · 03/07/2025
#worm25 was such a special experience for me as a first-time attendee. I felt truly honored to speak in the parasitism sessions and grateful for the chance to meet Nobel laureates. It felt almost unreal! Loved the comedy show 😍 and I was so happy to win a worm atlas shirt 👕.
Happy to catch up with Lesilee and Laurel (my C. elegans mentors 😍 the ones who taught me how to culture worms). I also got to meet Jui-Ching, a professor at NTU Medical School (Taiwan) who graduated from Lesilee’s lab.
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Ching-Jung Lin @chjlin.bsky.social · 02/07/2025
I went to the poster yesterday at #worm25 and it's fantastic. Would love to try the method in the future. 🙏
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Baris Tursun @baristursun.bsky.social · 30/06/2025
Fantastic Nobel Moment at #worm25 with Victor Ambros and Gary Ruvkun.
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UCDavisPlants @ucdavisplants.bsky.social · 30/05/2025
🌱 From Heliyon: Multitasking proteins in Xanthomonas secretomes may play hidden roles in virulence and plant-pathogen interactions. (Renata de Almeida Barbosa Assis, Abhaya M. Dandekar) ▶️ www.cell.com/heliyon/full... #plantpathology #plantscience
cell.com
Exploring multitasking proteins in Xanthomonas secretomes: Insights into mechanisms of plant-pathogen interactions
Recent advances in large-scale functional genomic analysis have significantly increased interest in multitask proteins. The role of these proteins in Xanthomonas phytopathogens, a model for plant-path...
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Reposted by Ching-Jung Lin
Erh-Min Lai-IPMB @erhminlai.bsky.social · 13/05/2025
Happy to write this News & Views highlighting a groundbreaking study on #Agrobacterium. By combining mathematical modelling with quantitative live-cell imaging, the study uncovered a density-dependent synergistic and antagonistic effect on #AMT
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Ching-Jung Lin @chjlin.bsky.social · 09/05/2025
👀 EFR-mediated PTI restricts transient transformation and genome editing, but not T-DNA integration. This study combines floral stage targeting 🌷, immune evasion 🛡️, and Agrobacterium engineering 🔧 to boost plant genome editing efficiency. #Agrobacterium #GenomeEditing www.biorxiv.org/content/10.1...
biorxiv.org
Floral Stage Optimization and Immune Evasion Enhance Agrobacterium-Mediated Genome Editing in Arabidopsis
Agrobacterium-mediated transformation via floral inoculation (AMT-FI) enables genetic engineering without tissue culture. It is widely used in the model plant Arabidopsis thaliana, yet its efficiency ...
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Ching-Jung Lin @chjlin.bsky.social · 05/05/2025
Overcoming gene functional redundancy 👀 Cool! #CRISPR #tomato www.nature.com/articles/s41...
nature.com
Construction of multi-targeted CRISPR libraries in tomato to overcome functional redundancy at genome-scale level - Nature Communications
Genetic variance is vital for breeding programs and mutant screening, yet traditional mutagenesis methods wrestle with genetic redundancy and a lack of specificity in gene targeting. Here the authors ...
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Ching-Jung Lin @chjlin.bsky.social · 27/04/2025
Proud of Siddique Lab undergrads at the UC Davis Undergraduate Research Conference! Aarish gave a fantastic talk (rainbow effect says it all!), Emma, Lisa, and Katelin rocked their posters. Shoutout to Jonathan from Coaker Lab for his awesome damage receptor talk! Cheers to all the inspiring souls!
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Yi-Chang Sung (宋宜璋) @yichangsung.bsky.social · 25/04/2025
Our Research Briefing on the tandem kinase proteins paper is online now! Curious about the story behind our TKP paper? 📄 Research Briefing: www.nature.com/articles/s41... 📄 Research article: www.nature.com/articles/s41...
nature.com
A plant dual-kinase protein traps a pathogen effector to trigger immunity - Nature Genetics
Tandem kinase proteins (TKPs) are key regulators of plant immunity. We found that RWT4, a wheat TKP, confers resistance to the fungal pathogen Magnaporthe oryzae by directly recognizing the effector A...
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Gitta Coaker @gittacoaker.bsky.social · 24/04/2025
Story behind our recent paper on tandem kinases is out! Written by @yichangsung.bsky.social. #MPMI #PlantBiology www.nature.com/articles/s41...
nature.com
A plant dual-kinase protein traps a pathogen effector to trigger immunity - Nature Genetics
Tandem kinase proteins (TKPs) are key regulators of plant immunity. We found that RWT4, a wheat TKP, confers resistance to the fungal pathogen Magnaporthe oryzae by directly recognizing the effector A...
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Ching-Jung Lin @chjlin.bsky.social · 17/04/2025
Fantastic work👏 Plant tandem kinases are so cool 😎
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Gitta Coaker @gittacoaker.bsky.social · 15/04/2025
www.pnas.org/doi/10.1073/...
pnas.org
A plant CLE peptide and its fungal mimic promote arbuscular mycorrhizal symbiosis via CRN-mediated ROS suppression | PNAS
CLAVATA3/EMBRYO SURROUNDING REGION-related (CLE) peptides have emerged as key regulators of plant–microbe interactions, including arbuscular mycorr...
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Ching-Jung Lin @chjlin.bsky.social · 18/03/2025
This is so cool 😎 ✨first regulator of effector production in PPN✨
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Ching-Jung Lin @chjlin.bsky.social · 18/03/2025
Two exciting papers from Shirasu Lab utilizing the *juice* of my favorite biological players—Agrobacterium and nematodes—to investigate receptor profiles! 🦠 www.biorxiv.org/content/10.1... 🪱 www.biorxiv.org/content/10.1... Congrats to the authors! 🥳🤩
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Gitta Coaker @gittacoaker.bsky.social · 08/03/2025
Nice turnout for Agriculture today too!
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Ching-Jung Lin @chjlin.bsky.social · 01/03/2025
🪱🔬 Nematode Nerds Unite! 🔬🪱 Huge thanks to the Groen lab for hosting us at UCR Nematology! From exciting research discussions to sharing our love for these tiny but mighty guys with many NEMA-enthusiastics from this department, it was a truly NEMA-zing experience! 🧬🔬 #WormScience #UCD #UCR
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