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CesarFortesLima

@cesarforteslima.bsky.social
312 followers 630 following 27 posts

Instructor at Johns Hopkins University (USA), Associate Researcher at Uppsala University (Sweden), and Editorial Board Member at Communications Biology (UK).

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CesarFortesLima @cesarforteslima.bsky.social · 16/09/2026
New paper out in @cp-iscience.bsky.social about an enigmatic minority social group from the Iberian Peninsula. A great collaboration with Alicia Portela, Antonio González-Martín, and team. "Genome-wide evidence for the local ancestry of the Agotes from Navarra, Spain" www.cell.com/iscience/ful...
cell.com
Genome-wide evidence for the local ancestry of the Agotes from Navarra, Spain
Genomics; Human genetics; Evolutionary biology; Human geography
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Alondra Nelson @alondra.bsky.social · 10/09/2026
Researchers across the country are turning to side hustles to fund their work. Behind the cuts sits a bigger shift: whether American science can still sustain durable research capacity. @lindseydcameron.bsky.social and I examine the stakes in a new piece @science.org: www.science.org/doi/10.1126/...
science.org
The wrong platform for science
Daniel Blumstein recently sat in a Colorado meadow waiting for yellow-bellied marmots to appear, as the ecologist and evolutionary biologist had done many times before, the New York Times reported. Bu...
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Graham Coop @gcbias.bsky.social · 10/09/2026
I’m looking to hire an NIH funded postdoc to join our lab here at Davis (please RT). Ongoing areas of interest include: 1) polygenic signals of selection from time series, ARGs, GWAS, etc 2) The interpretation of GWAS, polygenic scores, & sources of confounding
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alex ioannidis @alexgioannidis.bsky.social · 01/09/2026
Gnomix is published! www.nature.com/articles/s41... Still the most accurate & fastest local ancestry inference (LAI) method, bests Flare and others (RecombMix & Orchestra) released since our preprint. Easy to use, github.com/AI-sandbox/g... Use it with our toolkit, snputils.org
nature.com
Scalable high resolution ancestry deconvolution for genomic data - Nature Communications
The authors present Gnomix, a local ancestry framework that delivers leading accuracy across diverse admixed datasets on both whole-genome and array data with high efficiency, together with Gnofix, it...
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CesarFortesLima @cesarforteslima.bsky.social · 07/08/2026
Adam Phillippy ( @johnshopkinssph.bsky.social): "Filling the holes in whole genomes: A vision for personalized genomics from telomere to telomere" This week in @cellpress.bsky.social www.cell.com/cell/fulltex...
cell.com
Filling the holes in whole genomes: A vision for personalized genomics from telomere to telomere
Two decades after the Human Genome Project, we finally have the ability to read the complete genome of any human and (nearly) any species. These sequences provide the ideal foundation for training pre...
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Dr Lucy H. Timbrell @lucytimbrell96.bsky.social · 23/07/2026
Our preprint on modelling MIS 5 waterscapes in North Africa, led by the wonderful Solene Boisard @soleneboisard.bsky.social 😊 www.biorxiv.org/content/10.6...
biorxiv.org
Reconstructing Prehistoric Waterscapes and Human Mobility during MIS 5 in North Africa
The spatial organization of early Homo sapiens populations in North Africa during Marine Isotope Stage 5 (MIS 5) remains a key question for understanding past demographic and cultural dynamics. Climat...
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CesarFortesLima @cesarforteslima.bsky.social · 19/07/2026
"Tracing the origins of St Helena’s liberated Africans" using isotope data, ancient DNA, and historical records. Xueye Wang, Judy Watson, et al, Hannes Schroeder. July 2026, 𝘚𝘤𝘪𝘦𝘯𝘤𝘦 393(6808). doi: 10.1126/science.aeb3661 Link --> www.science.org/doi/10.1126/...
science.org
Tracing the origins of St Helena’s liberated Africans
In the mid-19th century, St Helena became a key receiving point for Africans “liberated” from illegal slave ships by the British Royal Navy. Of the ~27,000 landed, ~8000 died soon after arrival and we...
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schlebuschgroup.bsky.social @schlebuschgroup.bsky.social · 29/06/2026
Great talk by Andrea Soler i Núñez at #SMBE2026 on AMY1 CNVs and starch adaptation, highlighting the importance of controlling for demography in adaptation associations. Paper available on BioRxiv! doi.org/10.64898/202...
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CesarFortesLima @cesarforteslima.bsky.social · 18/06/2026
I'm so thrilled to be one of the Guest Editors of the new Nature Portfolio Collection on "𝙃𝙪𝙢𝙖𝙣 𝘼𝙙𝙢𝙞𝙭𝙩𝙪𝙧𝙚 𝙖𝙣𝙙 𝙈𝙞𝙜𝙧𝙖𝙩𝙞𝙤𝙣". This cross-journal collection involves publications in 𝘕𝘢𝘵𝘶𝘳𝘦 𝘎𝘦𝘯𝘦𝘵𝘪𝘤𝘴, 𝘕𝘢𝘵𝘶𝘳𝘦 𝘊𝘰𝘮𝘮𝘶𝘯𝘪𝘤𝘢𝘵𝘪𝘰𝘯𝘴, 𝘊𝘰𝘮𝘮𝘶𝘯𝘪𝘤𝘢𝘵𝘪𝘰𝘯𝘴 𝘉𝘪𝘰𝘭𝘰𝘨𝘺, and 𝘚𝘤𝘪 𝘙𝘦𝘱. Submit here: www.nature.com/collections/...
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CesarFortesLima @cesarforteslima.bsky.social · 25/06/2026
The first molecular data from 𝘏𝘰𝘮𝘰 𝘯𝘢𝘭𝘦𝘥𝘪. Protein data from the Rising Star cave system show the known sample of this species is 𝗲𝗻𝘁𝗶𝗿𝗲𝗹𝘆 𝗳𝗲𝗺𝗮𝗹𝗲. John Hawks Blog --> www.johnhawks.net/p/the-first-...
johnhawks.net
The first molecular data from Homo naledi
Protein data from the Rising Star cave system show the known sample of this species is entirely female.
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Mateja Hajdinjak @matejahajdi.bsky.social · 23/06/2026
Ancient human DNA from the cave walls! 🤯 Wonderful new paper led by Alba Bossoms Mesa and a great team of people that made this work possible.
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Jeff Spence @jeffspence.github.io · 22/06/2026
Excited to see @jonj-udd.bsky.social's fantastic work out @genetics-gsa.bsky.social. Selection in _heterozygotes_ is the primary force shaping allele frequencies of loss-of-function mutations in humans, even in genes only associated with purely recessive diseases. 🧪🧬 doi.org/10.1093/gene...
doi.org
Allele Frequencies at Recessive Disease Genes are Mainly Determined by Pleiotropic Effects in Heterozygotes
Abstract. The classic theory of mutation-selection balance predicts the equilibrium frequency of genetic variation under negative selection. The model pred
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Dr Sam Neil @drsamneil.bsky.social · 05/06/2026
Nature journals invite submissions for #DNA papers on Human Admixture and Migration. Deadline: 28 February 2027 www.nature.com/collections/...
nature.com
Human Admixture and Migration
This collection invites submissions that leverage ancient or modern genetic data to understand human population shifts or health. Topics of interest include, ...
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Communications Biology @commsbio.nature.com · 02/06/2026
Guest editors are our excellent Editorial Board members Dr Pavel Flegontov and Dr Cesar Fortes-Lima!
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CesarFortesLima @cesarforteslima.bsky.social · 18/06/2026
I'm so thrilled to be one of the Guest Editors of the new Nature Portfolio Collection on "𝙃𝙪𝙢𝙖𝙣 𝘼𝙙𝙢𝙞𝙭𝙩𝙪𝙧𝙚 𝙖𝙣𝙙 𝙈𝙞𝙜𝙧𝙖𝙩𝙞𝙤𝙣". This cross-journal collection involves publications in 𝘕𝘢𝘵𝘶𝘳𝘦 𝘎𝘦𝘯𝘦𝘵𝘪𝘤𝘴, 𝘕𝘢𝘵𝘶𝘳𝘦 𝘊𝘰𝘮𝘮𝘶𝘯𝘪𝘤𝘢𝘵𝘪𝘰𝘯𝘴, 𝘊𝘰𝘮𝘮𝘶𝘯𝘪𝘤𝘢𝘵𝘪𝘰𝘯𝘴 𝘉𝘪𝘰𝘭𝘰𝘨𝘺, and 𝘚𝘤𝘪 𝘙𝘦𝘱. Submit here: www.nature.com/collections/...
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CesarFortesLima @cesarforteslima.bsky.social · 17/06/2026
Postdoctoral Research Fellow position in Population Genomics at the Sydney Brenner Institute for Molecular Bioscience (SBIMB), U of the Witwatersrand (South Africa). If you are passionate about genomics, data-driven discovery, and advancing equitable global health research, I encourage you to apply.
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CesarFortesLima @cesarforteslima.bsky.social · 16/06/2026
New PhD student position in Population Genomics at the Günther Lab within the Human Evolution Program within the Department of Organismal Biology (Uppsala University, Sweden). Last application date:7 August 2026 www.uu.se/en/about-uu/...
uu.se
PhD student position in Population Genomics - Uppsala University
PhD student position in Population Genomics , Department of Organismal Biology, Uppsala University
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Serena Tucci @serenat82.bsky.social · 12/06/2026
news.yale.edu
Genomes from Oceania offer new clues to human evolution
A Yale-led study of genomes from Near Oceania reveals a complex population history and evidence that DNA inherited from extinct hominins continues to influence human biology today.
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Yun Deng @yundeng.bsky.social · 09/06/2026
#PEQG26 folks! I will be presenting my postdoc project with @jkpritch.bsky.social and @jeffspence.github.io about inferring population structure dynamics over time with tensor decomposition on ARG. The talk will be at the James Crow Talk session on Wednesday. Look forward to seeing everyone there!
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ERGA - European Reference Genome Atlas @ergabiodiv.bsky.social · 08/06/2026
Great to see so many ERGA Members organising sessions & giving presentations @official-smbe.bsky.social conference -- hard to choose which session! But during the breaks make sure to pop by the ERGA booth to say hello & find out more! www.erga-biodiversity.eu
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CesarFortesLima @cesarforteslima.bsky.social · 09/06/2026
Limited selection on Neanderthal DNA in 30,780 recently admixed genomes with African-like ancestry Aaron Pfennig and Joseph Lachance, Molecular Biology and Evolution, 2026, doi.org/10.1093/molb...
doi.org
Limited selection on Neanderthal DNA in 30,780 recently admixed genomes with African-like ancestry
Abstract. Following introgression, Neanderthal DNA was initially purged from non-African genomes, but the evolutionary fate of remaining introgressed DNA i
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CesarFortesLima @cesarforteslima.bsky.social · 05/06/2026
I'm so thrilled to be one of the Guest Editors of the new Nature Portfolio Collection on "𝙃𝙪𝙢𝙖𝙣 𝘼𝙙𝙢𝙞𝙭𝙩𝙪𝙧𝙚 𝙖𝙣𝙙 𝙈𝙞𝙜𝙧𝙖𝙩𝙞𝙤𝙣". This cross-journal collection involves publications in 𝘕𝘢𝘵𝘶𝘳𝘦 𝘎𝘦𝘯𝘦𝘵𝘪𝘤𝘴, 𝘕𝘢𝘵𝘶𝘳𝘦 𝘊𝘰𝘮𝘮𝘶𝘯𝘪𝘤𝘢𝘵𝘪𝘰𝘯𝘴, 𝘊𝘰𝘮𝘮𝘶𝘯𝘪𝘤𝘢𝘵𝘪𝘰𝘯𝘴 𝘉𝘪𝘰𝘭𝘰𝘨𝘺, and 𝘚𝘤𝘪 𝘙𝘦𝘱. communities.springernature.com/posts/call-f...
communities.springernature.com
Call for papers: Human Admixture and Migration
This Collection invites submissions that use ancient or modern genetic data to explore human population history, admixture, and health. Submissions are encouraged by 28 February 2027.
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Shoumita Dasgupta, PhD @profdasgupta.bsky.social · 26/05/2026
Applications are now open for the @geneticssociety.bsky.social Human Genetics Scholar Initiative (HGSI)! www.ashg.org/membership/a... HGSI supports trainees and early-career researchers through structured mentorship, leadership and career development programming...
ashg.org
Human Genetics Scholars Initiative
HGSI supports and prepares early-career individuals for professional success and creates a community of researchers committed to achieving ASHG’s vision.
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AaRC @aarc-community.bsky.social · 07/05/2026
Here's the amazing lineup of speakers for our upcoming virtual conference. There’s still time to register and join us online. We look forward to seeing you there! forms.gle/Kse1kPYnpsVg...
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Carina Schlebusch @cschlebu.bsky.social · 04/05/2026
Thanks to KAW @kawresearch.bsky.social for their support and this very nice feature on our research!
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ICP2026 Stockholm @palaeogenomics.bsky.social · 02/05/2026
Only ONE WEEK left to register for #ICP2026sthlm 👀 Deadline: 8th May Join us for an amazing week full of talks and networking on all things ancient DNA! Check the FULL conference program 👉 icp2026.palaeogenomics.org/wp-content/u... Register here 👉 icp2026.palaeogenomics.org/registration/
Panoramic view of Stockholm
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CesarFortesLima @cesarforteslima.bsky.social · 29/04/2026
The 11th International Conference on Bantu Languages will take place from August 18 to 21, 2026, on-campus and online. These are the Keynote speakers. Early-bird rates are available until May 1. You can register here: event.ugent.be/registration... +Info: bantugent.ugent.be/bantu11
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CesarFortesLima @cesarforteslima.bsky.social · 09/04/2026
@elpais.com - Ciencia: "Un cementerio musulmán muestra el mestizaje en tiempos de Al-Andalus. El análisis genético de los enterrados en una maqbara de Ibiza desvela que la mayoría tenían ancestros tanto europeos como norteafricanos." elpais.com/ciencia/2026...
elpais.com
Un cementerio musulmán muestra el mestizaje en tiempos de Al-Andalus
El análisis genético de los enterrados en una maqbara de Ibiza desvela que la mayoría tenían ancestros tanto europeos como norteafricanos
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Communications Biology @commsbio.nature.com · 02/04/2026
Genomic analysis of Peruvians populations reveals how admixture and recent migrations shaped genetic diversity, fine-scale structure, and sex-biased ancestry in the context of urban areas. @vicbp1.bsky.social @genomescience.bsky.social www.nature.com/articles/s42...
nature.com
Unraveling the genetic landscape and admixture dynamics of urban populations across Peru - Communications Biology
Genomic analysis of Peruvians populations reveals how admixture and recent migrations shaped genetic diversity, fine-scale structure, and sex-biased ancestry in the context of urban areas.
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PaleoAnthropology @qafzeh.bsky.social · 02/04/2026
Did humans cause the Quaternary megafauna extinction? @hannahritchie.bsky.social ourworldindata.org/quaternary-m...
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Monica H Green @monicamedhist.bsky.social · 29/03/2026
#GlobalMiddleAges #MedievalSky #aDNA Paleogenomic study on Islamic Ibiza. 2 individuals suggest Sub-Saharan origins (Senegambia & southern Chad), "providing direct evidence of trans-Saharan connections via military & slave networks." #OpenAccess www.nature.com/articles/s41...
nature.com
Analysis of medieval burials from Ibiza reveals genetic and pathogenic diversity during the Islamic period - Nature Communications
Ibiza, an island in present-day Spain, was under Islamic rule between the 10th and 13th centuries CE. Here, the authors analyse the remains of thirteen individuals from medieval Islamic burials in Ibi...
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CesarFortesLima @cesarforteslima.bsky.social · 30/03/2026
"The Cemetery at the Edge of the Islamic World" www.youtube.com/watch?v=OX1u... Evolutionary Insights by Anthropology net Podcast
youtube.com
The Cemetery at the Edge of the Islamic World
YouTube video by Kambiz Kamrani
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Centre for Palaeogenetics @cpgsthlm.bsky.social · 27/03/2026
Their results also reveal direct genetic links to Senegambia and southern Chad, showing that medieval Ibiza was connected to wider trans-Saharan networks. These data match historical sources describing Almoravid movements, military recruitment, and slave and trade networks across the Sahara.
Plan of the excavation. The analysed burials are shown in red.Aerial view of the cemetery, which was discovered by chance during construction works.
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PaleoAnthropology @qafzeh.bsky.social · 27/03/2026
Study shows the hominid population of Sima de los Huesos had a varied diet phys.org/news/2026-01...
phys.org
Study shows the hominid population of Sima de los Huesos had a varied diet
Researchers at the Centro Nacional de Investigación sobre la Evolución Humana (CENIEH) have led a study, recently published in the Journal of Human Evolution, on the diet of individuals at the Sima de...
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Centre for Palaeogenetics @cpgsthlm.bsky.social · 27/03/2026
New paper alert 🚨 Researchers at #CPGStlhm have analyzed ancient genomes from an Islamic cemetery in Ibiza (950–1150 CE) 🏖️ They found a highly diverse community with ancestry from Europe and North Africa! The paper was published in @natcomms.nature.com OA link www.nature.com/articles/s41...
Map of the Mediterranean during the Middle Ages, showing the Islamic areas of influence and Ibiza.Ricardo, lead author of the article, processing one of the samples in the lab.
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PaleoAnthropology @qafzeh.bsky.social · 27/03/2026
The Denisovan Mosaic: Hybridizations, Superarchaic Ancestors, and Echoes in Today's Humans – Nutcracker Man @robertosaezm.bsky.social nutcrackerman.com/2025/11/04/e...
nutcrackerman.com
El mosaico denisovano: hibridaciones, ancestros superarcaicos y ecos en los humanos actuales
Nota: Este artículo se basa en dos preprints pendientes de revisión por pares. Se actualizará con las versiones que sean publicadas. Un trabajo de Peyrégne y colaboradores presenta el genoma de alt…
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Torsten Günther @trstngnthr.bsky.social · 26/03/2026
Looking forward to this!
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CesarFortesLima @cesarforteslima.bsky.social · 26/03/2026
📢 Our aDNA study has been published today in @natcomms.nature.com! A great collaboration with Ricardo Rodríguez, Anders Götherström, Carina Schlebusch & team. 𝘈𝘯𝘢𝘭𝘺𝘴𝘪𝘴 𝘰𝘧 𝘮𝘦𝘥𝘪𝘦𝘷𝘢𝘭 𝘣𝘶𝘳𝘪𝘢𝘭𝘴 𝘧𝘳𝘰𝘮 𝘐𝘣𝘪𝘻𝘢 𝘳𝘦𝘷𝘦𝘢𝘭𝘴 𝘨𝘦𝘯𝘦𝘵𝘪𝘤 𝘢𝘯𝘥 𝘱𝘢𝘵𝘩𝘰𝘨𝘦𝘯𝘪𝘤 𝘥𝘪𝘷𝘦𝘳𝘴𝘪𝘵𝘺 𝘥𝘶𝘳𝘪𝘯𝘨 𝘵𝘩𝘦 𝘐𝘴𝘭𝘢𝘮𝘪𝘤 𝘱𝘦𝘳𝘪𝘰𝘥. www.nature.com/articles/s41...
nature.com
Analysis of medieval burials from Ibiza reveals genetic and pathogenic diversity during the Islamic period - Nature Communications
Ibiza, an island in present-day Spain, was under Islamic rule between the 10th and 13th centuries CE. Here, the authors analyse the remains of thirteen individuals from medieval Islamic burials in Ibi...
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PaleoAnthropology @qafzeh.bsky.social · 25/03/2026
Earliest evidence of smoke-dried mummification: More than 10,000 years ago in southern China and Southeast Asia | PNAS www.pnas.org/doi/full/10....
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Carina Schlebusch @cschlebu.bsky.social · 25/03/2026
Great to work with Michael Thame on this ScienceVega issue highlighting women in STEM! edition.pagesuite-professional.co.uk/html5/reader...
edition.pagesuite-professional.co.uk
ScienceVega
ScienceVega - March 2026
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Chiara Barbieri @chiarabarbieri.bsky.social · 20/03/2026
We are very excited to host a SMBE satellite meeting about gene-culture co-evolution in Cagliari, Sardinia, Sept 2026! Abstract submission is OPEN! stay tuned for more info and help us spread the news! 🦩 🏖️ 🧬 😎
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CesarFortesLima @cesarforteslima.bsky.social · 20/03/2026
I'm so pleased and honoured to be one of the Keynote speakers at the 11𝙩𝙝 𝙄𝙣𝙩𝙚𝙧𝙣𝙖𝙩𝙞𝙤𝙣𝙖𝙡 𝘾𝙤𝙣𝙛𝙚𝙧𝙚𝙣𝙘𝙚 𝙤𝙣 𝘽𝙖𝙣𝙩𝙪 𝙇𝙖𝙣𝙜𝙪𝙖𝙜𝙚𝙨 (𝘽𝙖𝙣𝙩𝙪11). This event will be hosted at Ghent University in Belgium this August. + Info: www.bantugent.ugent.be/bantu11
bantugent.ugent.be
Bantu 11 Conference – BantUGent – UGent Centre for Bantu Studies
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Sandra Oliveira @sandra-oliveira.bsky.social · 20/03/2026
Genetics and culture are deeply intertwined. Does your field have something to say about this vast topic? Wanna learn more about the latest research on this? Join us for this SMBE satellite meeting in Sardinia! Travel grants are available! More info here: sites.google.com/view/gene-cu...
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CesarFortesLima @cesarforteslima.bsky.social · 10/03/2026
My next Webinar is in just one week! Title: 𝙄𝙣𝙨𝙞𝙜𝙝𝙩𝙨 𝙞𝙣𝙩𝙤 𝙝𝙪𝙢𝙖𝙣 𝙙𝙚𝙢𝙤𝙜𝙧𝙖𝙥𝙝𝙞𝙘 𝙝𝙞𝙨𝙩𝙤𝙧𝙮 𝙞𝙣 𝘼𝙛𝙧𝙞𝙘𝙖 𝙛𝙧𝙤𝙢 𝙖 𝙥𝙤𝙥𝙪𝙡𝙖𝙩𝙞𝙤𝙣 𝙜𝙚𝙣𝙤𝙢𝙞𝙘𝙨 𝙥𝙚𝙧𝙨𝙥𝙚𝙘𝙩𝙞𝙫𝙚 Organised by the Human Palaeosystems at the Max Planck Institute of Geoanthropology. Free Zoom Registration --> www.gea.mpg.de/201476/cross...
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PaleoAnthropology @qafzeh.bsky.social · 03/03/2026
Recent Fossil Discoveries at Drimolen Cave, South Africa - David Strait @brianapobiner.bsky.social youtu.be/IXeJRKsaUtk?...
youtu.be
HOT (Human Origins Today) Topic: Recent Fossil Discoveries at Drimolen Cave, South Africa
YouTube video by Smithsonian's National Museum of Natural History
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Carina Schlebusch @cschlebu.bsky.social · 19/02/2026
New preprint! with @a-solernunez.bsky.social Rethinking a textbook example of human adaptation "AMY1 copy number evolution in light of demographic history" Once population structure is accounted for, the classic starch–agriculture narrative becomes much less clear www.biorxiv.org/content/10.6...
biorxiv.org
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PaleoAnthropology @qafzeh.bsky.social · 26/02/2026
Early hominins from Morocco basal to the Homo sapiens lineage www.nature.com/articles/s41...
nature.com
Early hominins from Morocco basal to the Homo sapiens lineage - Nature
New hominin fossils from the Grotte à Hominidés at Thomas Quarry I (ThI-GH) in Casablanca, Morocco, dated to around 773 thousand years ago are similar in age to Homo antecessor, yet are morphologicall...
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PaleoAnthropology @qafzeh.bsky.social · 08/02/2026
CARTA: Archaic Introgression Reveals Human Dispersals with Janet Kelso @janetk.bsky.social youtu.be/izOaYzMoMA4?...
youtu.be
CARTA: Archaic Introgression Reveals Human Dispersals with Janet Kelso
YouTube video by University of California Television (UCTV)
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Reposted by CesarFortesLima
Center for the Human Past (CHP) @humanpastcenter.bsky.social · 03/02/2026
New #preprint: #Ancient #tree-topologies and #gene-flow processes among #human lineages in #Africa #humanpast #genetics www.biorxiv.org/content/10.1...
biorxiv.org
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Reposted by CesarFortesLima
Dr. K. Lotterhos @drk-lo.bsky.social · 03/02/2026
Slim 5 can now simulate genomes with multiple chromosomes like autosomes, sex chromosomes, mitochondria and chloroplast dna academic.oup.com/mbe/article/...
academic.oup.com
SLiM 5: Eco-evolutionary Simulations Across Multiple Chromosomes and Full Genomes
Abstract. Evolutionary simulations of multiple chromosomes, even up to the scale of full-genome simulations, are becoming increasingly important in populat
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