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Corentin Claeys Bouuaert

@ccb-lab.bsky.social
910 followers 933 following 62 posts

Group leader at UCLouvain exploring the mechanisms of DNA double-strand break formation and recombination during meiosis. Lab website: perso.uclouvain.be/corentin.claeys

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Reposted by Corentin Claeys Bouuaert
Jesse Raab @jraab.bsky.social · 24/09/2026
Can't decide if this is hilarious or depressing substack.com/home/post/p-...
substack.com
Opinion: I Miss When The NIH Payline Was 40% And We All Mouth-Pipetted Phenol
By Dr. Douglas R. Waverly, Professor Emeritus of Biochemistry, Yale University
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Reposted by Corentin Claeys Bouuaert
André Marques @amarques.bsky.social · 16/09/2026
Out today in Nature: sex without crossovers. Rhynchospora tenuis makes pollen, fertilises and sets seed, yet 0 crossovers in 10,997 pollen nuclei. Chromosome drive and ~87% seed abortion rebuild the mother's genotype, so the offspring are clones. doi.org/10.1038/s415...
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Aurele Piazza @aurelepiazza.bsky.social · 18/09/2026
What molecular mechanisms underlie the needle-in-a-haystack search for homology required to fix a DNA break? In this preprint, we reveal multiple controls of homology search in cells: onset, coordination, reach and inactivation. www.biorxiv.org/content/10.6...
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Corentin Claeys Bouuaert @ccb-lab.bsky.social · 21/08/2026
Happy to see this paper published in Nucleic Acids Research! academic.oup.com/nar/article/...
academic.oup.com
Insights into the recruitment of the H3K4me3 reader Spp1 by the meiotic double-strand break protein Mer2
Abstract. The formation of DNA double-strand breaks (DSBs) by Spo11 is tied to the loop-axis organization of meiotic chromosomes. Before DSB formation, chr
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Reposted by Corentin Claeys Bouuaert
Hajime Murakami @alhajijoker.bsky.social · 08/07/2026
Happy to share the first preprint from our lab, led by @arrosan.bsky.social, in collaboration with @ccb-lab.bsky.social. We identify a conserved cohesin-interacting motif in Red1 required for its recruitment, DSB formation, and Mek1 activation. www.biorxiv.org/content/10.6... #meiosis #recombination
biorxiv.org
Cohesin–axis interaction via a conserved Red1 motif promotes domain-specific DSB formation and Mek1 activation
Faithful chromosome segregation during meiosis I requires tight control of interhomolog recombination. In budding yeast, the meiotic chromosome axis, built on Rec8-containing cohesin together with Red...
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Reposted by Corentin Claeys Bouuaert
Corentin Claeys Bouuaert @ccb-lab.bsky.social · 04/06/2026
Delighted to see our paper "Recruitment of Mre11 to recombination sites during meiosis" available in its final form at Nature Communications. www.nature.com/articles/s41...
nature.com
Recruitment of Mre11 to recombination sites during meiosis - Nature Communications
During meiosis the MRX complex is required for DSB formation in budding yeast. Here, the authors show the Mre11 forms DNA-dependent condensates via its C-terminal disordered tail, which further intera...
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Corentin Claeys Bouuaert @ccb-lab.bsky.social · 04/06/2026
Delighted to see our paper "Recruitment of Mre11 to recombination sites during meiosis" available in its final form at Nature Communications. www.nature.com/articles/s41...
nature.com
Recruitment of Mre11 to recombination sites during meiosis - Nature Communications
During meiosis the MRX complex is required for DSB formation in budding yeast. Here, the authors show the Mre11 forms DNA-dependent condensates via its C-terminal disordered tail, which further intera...
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Reposted by Corentin Claeys Bouuaert
Aurele Piazza @aurelepiazza.bsky.social · 23/03/2026
Delighted to see our work now published at the EMBO Journal! Check also this concomitant paper by the Bai and Mirny labs with an orthogonal approach that aligns well with our measurements www.nature.com/articles/s41... Great system to study how SMCs facilitate/regulate target search in chromatin!
nature.com
Condensin accelerates long-range intra-chromosomal interactions - Nature Communications
Long‑range chromosome encounters in cells are hard to quantify. Here, the authors induce artificial contacts in yeast and show that intra‑chromosomal interactions form faster than inter‑chromosomal on...
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Reposted by Corentin Claeys Bouuaert
Dhananjaya S Kulkarni @dkbiochem.bsky.social · 18/03/2026
Excellent work from Yun Yan and HBD Prasada Rao unraveling yet again Small ubiquitin-like modifier (SUMO) in regulating loop–axis organization in mouse meiosis. @hunterlab.bsky.social biorxiv.org/content/10.6...
biorxiv.org
SUMO mediates the coordinate regulation of meiotic chromosome length and crossover rate
Meiotic prophase-I chromosomes are organized into linear arrays of chromatin loops anchored to proteinaceous axes that define the interaction interfaces for the pairing and synapsis of homologous chromosomes. Chromatin loop size and axial chromosome length are inversely correlated and vary widely both between and within species, including between the sexes. The molecular basis of this variation remains unclear. Here, we provide evidence that the small ubiquitin-like modifier, SUMO, regulates loop–axis organization in mouse meiosis. Our analysis shows that the longer axes of oocyte chromosomes contain more SUMO per unit length than the shorter axes of spermatocyte chromosomes. In mouse models, the loss of SUMO1 results in shorter axes and longer chromatin loops. Conversely, increased SUMO1 conjugation, caused by mutation of the SENP1 isopeptidase, produces longer axes with shorter loops. Axis length positively correlates with meiotic recombination. Accordingly, Sumo1 and Senp1 mutations respectively decrease and increase crossover frequency. These findings identify SUMO as a key regulator of meiotic chromosome architecture and suggest a molecular basis for the physiological variation in chromosome length and recombination rates seen among species, sexes, individuals, and individual meiocytes. ![Figure][1]</img> ### Competing Interest Statement The authors have declared no competing interest. Eunice Kennedy Shriver National Institute of Child Health and Human Development, https://ror.org/04byxyr05, R01HD109322 Guangdong Basic and Applied Basic Research Foundation, 2024A1515012907 DBT-Ramalingaswami, re-entry fellowship NIAB core grant, C0031 [1]: pending:yes
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Retraction Watch @retractionwatch.com · 30/01/2026
Forget pickles and ice cream. I published a fake paper on pregnancy cravings for prime numbers.
retractionwatch.com
Guest post: Forget pickles and ice cream. I published a fake paper on pregnancy cravings for prime numbers
Image generated by Google Gemini I had grown weary of the constant stream and abuse of spam invitations to submit manuscripts to journals and to attend fake conferences on the other side of the wor…
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Corentin Claeys Bouuaert @ccb-lab.bsky.social · 18/01/2026
This work was led by Hajar Aït Bella, with key contributions from lab members Mahesh Survi and Julian Urdiain-Arraiza, and from the Hochwagen lab. Congratulations to all, and thanks to the ERC @erc.europa.eu and the FNRS for funding!
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Corentin Claeys Bouuaert @ccb-lab.bsky.social · 18/01/2026
To conclude, our structure-function analysis provides new insights into how Spo11 dimerizes and how its partners contribute to the initiation of meiotic recombination.
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Corentin Claeys Bouuaert @ccb-lab.bsky.social · 18/01/2026
Finally, we found that Rec102 also interacts with Ski8 across the dimerization plane. Mutation of an interface residue reduces Rec102-Ski8 interaction, dimerization of the core complex on DNA, and meiotic DSB formation.
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Corentin Claeys Bouuaert @ccb-lab.bsky.social · 18/01/2026
We found that this triple arginine motif is essential for DNA binding by the Spo11 core complex, and it turned out that this patch indeed directly contacts DNA. Hence, Rec102 has a key DNA-binding function that is important for DSB formation.
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Corentin Claeys Bouuaert @ccb-lab.bsky.social · 18/01/2026
In Topo VI, the B subunit contributes to DNA binding, so we asked whether the related subunit Rec102 shares this function. Lacking decent structural models at the time, we mutated several positive patches in Rec102, and identified one interesting candidate that kills DSB formation.
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Corentin Claeys Bouuaert @ccb-lab.bsky.social · 18/01/2026
In parallel, a forward genetic screen identified a mutation within Spo11 that abolishes DSB formation. We showed that this mutation does not affect DNA binding and dimerization, but creates a steric clash across the dimer interface that obstructs the active site and abolishes cleavage.
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Corentin Claeys Bouuaert @ccb-lab.bsky.social · 18/01/2026
We showed by gel shift that this mutation does not impact the affinity of the Spo11 core complex for DNA, but specifically reduces the assembly of dimeric complexes.
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Corentin Claeys Bouuaert @ccb-lab.bsky.social · 18/01/2026
We mutated dozens of residues at the predicted dimer interface, and were surprised to find that most mutations had no meiotic phenotype. Nevertheless, we found one triple mutant that significantly reduces DSB formation and leads to reduced spore viability.
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Corentin Claeys Bouuaert @ccb-lab.bsky.social · 18/01/2026
To gain further insights into Spo11 dimerization, we modeled the structure of a DNA-bound dimeric core complex. AlphaFold3 produced a high-confidence model, showing the DNA substrate bent at an angle of about 100°, consistent with previous AFM data.
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Corentin Claeys Bouuaert @ccb-lab.bsky.social · 18/01/2026
We investigated how purified Spo11 core complex bind DNA in vitro using gel shift assays. We found that it indeed dimerizes on DNA to form an unstable complex that repeatedly dissociates and reassembles during electrophoresis.
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Corentin Claeys Bouuaert @ccb-lab.bsky.social · 18/01/2026
We previously showed that the Spo11 core complex binds DNA and hypothesized that it may dimerize on DNA. Based on AFM imaging, we also proposed that the Spo11 complex bends DNA and perhaps traps a second DNA duplex prior to DNA cleavage, like type II topoisomerases do.
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Corentin Claeys Bouuaert @ccb-lab.bsky.social · 18/01/2026
Spo11 cleaves DNA via a topoisomerase-like mechanism involving hybrid active sites located at the dimer interface. Spo11 forms a complex with Ski8, Rec102 and Rec104, but unlike its topoisomerase relative, the complex has a monomeric (1:1:1:1) stoichiometry. How does it dimerize?
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Corentin Claeys Bouuaert @ccb-lab.bsky.social · 18/01/2026
I’m happy to present a new paper from the lab, where we investigated how the yeast Spo11 core complex dimerizes to induce the formation of meiotic DNA double-strand breaks. 🧵 www.biorxiv.org/content/10.6...
biorxiv.org
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Oded Rechavi @odedrechavi.bsky.social · 06/11/2025
IT'S HAPPENING! 💥 I'm psyched to launch the collaboration between @qedscience.bsky.social & @openrxiv.bsky.social @biorxivpreprint.bsky.social! Preprint + q.e.d = your science is out there, and anyone can appreciate it. Let's care about making discoveries, and not on “getting published” (1/3) 👇
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Tomer Ullman @tomerullman.bsky.social · 03/11/2025
Nature suggests you use their "Manuscript Adviser" bot to get advice before submitting I uploaded the classic Watson & Crick paper about DNA structure, and the Adviser had this to say about one of the greatest paper endings of the century:
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Reposted by Corentin Claeys Bouuaert
Petr Cejka @cejkalab.bsky.social · 30/10/2025
Among the anti-recombinases, FIGNL1 rules them all. So much that inactivating it brings BRCA2-deficient cells to life. Who is responsible for RAD51 loading without BRCA2/FIGNL1, check out the paper to find out! Great collaboration with @raychaudhurilab.bsky.social www.science.org/doi/10.1126/...
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Corentin Claeys Bouuaert @ccb-lab.bsky.social · 28/09/2025
This work was led by my research technician Pascaline Liloku. Congratulations to her! I thank our collaborators, in particular the team of David Alsteens for help with AFM experiments, and Yann Sterckx for SAXS experiments. Finally, big thanks to the ERC and FNRS for funding!
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Corentin Claeys Bouuaert @ccb-lab.bsky.social · 28/09/2025
Do we have any evidence to support this? And does the DNA-binding activity of Spp1 have any functional consequences? To find out, check out the paper!
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Corentin Claeys Bouuaert @ccb-lab.bsky.social · 28/09/2025
We think that the binding of Spp1 to Mer2 occludes part of the DNA-binding interface of Mer2. However, the cost associated to Spp1 binding is compensated by a DNA-binding motif contributed by Spp1. We refer to this as an occlusion-compensation model.
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Corentin Claeys Bouuaert @ccb-lab.bsky.social · 28/09/2025
So, how then do Mer2-DNA and Mer2-Spp1 interactions relate to each other? In other words, are the binding of DNA and Spp1 to Mer2 independent? Or are they competitive? Or in contrast are they cooperative? We think there is yet another possibility.
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Corentin Claeys Bouuaert @ccb-lab.bsky.social · 28/09/2025
So how does Spp1 bind DNA? Again AlphaFold proved helpful and pointed to a motif required for DNA binding. Mutating this motif confirmed that, although full-length Spp1 does not bind DNA by itself, it binds DNA in the context of a complex with Mer2.
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Corentin Claeys Bouuaert @ccb-lab.bsky.social · 28/09/2025
While full-length Spp1 does not bind DNA by itself, a truncation of Spp1 bound DNA quite efficiently. Thus, DNA-binding appears to be auto-inhibited in the context of the full-length protein. That was surprise 3.
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Corentin Claeys Bouuaert @ccb-lab.bsky.social · 28/09/2025
So how does Spp1 affect DNA binding and condensation? We expected that DNA and Spp1 might compete for access to Mer2, but that doesn't seem to be the case. Instead Spp1 seems to somewhat stimulate DNA binding and condensation by Mer2. Does Spp1 contribute to DNA binding directly?
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Corentin Claeys Bouuaert @ccb-lab.bsky.social · 28/09/2025
Mer2 forms DNA-dependent condensates and effectively recruits Spp1. Spp1 is essentially recruited as a client, but Spp1 does seem to stimulate condensation a little.
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Corentin Claeys Bouuaert @ccb-lab.bsky.social · 28/09/2025
Now on two the second surprise: The Mer2 coiled coil domain that binds Spp1 is also involved in DNA binding. We reconstituted Mer2-Spp1-DNA complexes and used AlphaFold to visualize what these complexes might look like. (these models look pretty cool but are to be taken with a big grain of salt)
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Corentin Claeys Bouuaert @ccb-lab.bsky.social · 28/09/2025
We verified that the previously-reported 4:2 stoichiometry was right. Indeed it was. Yet SAXS analysis all fit with the AlphaFold model. There are several possible explanations: Our favorite is that the binding of Spp1 to Mer2 is allosterically regulated. (our arguments are in the paper).
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Corentin Claeys Bouuaert @ccb-lab.bsky.social · 28/09/2025
However, there is an issue: based on the AlphaFold model, it is not clear why Mer2 and Spp1 would assemble a complex with a 4:2 stoichiometry, as had been shown previously. Mer2 is a homotetramer, and based on the model, it could accommodate 4 Spp1 subunits. That's our 1st surprise.
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Corentin Claeys Bouuaert @ccb-lab.bsky.social · 28/09/2025
An mutagenesis analysis of the predicted interface provided evidence that supports the model.
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Corentin Claeys Bouuaert @ccb-lab.bsky.social · 28/09/2025
We used AlphaFold to model the structure of the Mer2-Spp1 interaction domain, revealing a cool model with two Spp1 bound to a tetrameric Mer2 coiled coil.
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Corentin Claeys Bouuaert @ccb-lab.bsky.social · 28/09/2025
We set out to characterize the interaction between Mer2 and Spp1. We developed an approach based on atomic-force microscopy to measure single-molecule Spp1-Mer2 interactions, revealing a dynamic interaction.
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Corentin Claeys Bouuaert @ccb-lab.bsky.social · 28/09/2025
Meiotic double-strand break (DSB) formation is tied to the loop-axis organization of meiotic chromosomes. DSB proteins are localized to the axes, and Spo11 cleaves DNA within loops. Spp1 connects the loop to the axes by binding H3K4me3 marks within loops and the DSB protein Mer2 on the axis.
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Corentin Claeys Bouuaert @ccb-lab.bsky.social · 28/09/2025
✨New paper from the lab! ✨ We present a fun study aimed at characterizing the interaction between the H3K4me3 reader Spp1 and the meiotic double-strand break protein Mer2, and their relationship with DNA binding. We got some new insights and a few surprises.🧵 www.biorxiv.org/content/10.1...
biorxiv.org
Insights into the recruitment of the H3K4me3 reader Spp1 by the meiotic double-strand break protein Mer2
The formation of DNA double-strand breaks (DSBs) by Spo11 is tied to the loop-axis organization of meiotic chromosomes. Prior to DSB formation, chromatin loops marked by histone H3K4 trimethylation be...
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Reposted by Corentin Claeys Bouuaert
Piotr Ziolkowski @piotraz.bsky.social · 25/09/2025
Holliday junction–ZMM feedback ensures meiotic crossover assurance in yeast! Great work from the Joao Matos lab! 👉 www.nature.com/articles/s41...
nature.com
Holliday junction–ZMM protein feedback enables meiotic crossover assurance - Nature
Holliday junctions maintain chromosome synapsis to enable crossover assurance in budding yeast.
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Piotr Ziolkowski @piotraz.bsky.social · 25/09/2025
Fantastic work coming out of Neil Hunter’s lab! www.nature.com/articles/s41...
nature.com
Protecting double Holliday junctions ensures crossing over during meiosis - Nature
Conditional ablation experiments show that key components of the synaptonemal complex protect double Holliday junction recombination intermediates to ensure their resolution into crossover products, which are required for accurate chromosome segregation during meiosis.
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Reposted by Corentin Claeys Bouuaert
Valérie Borde @lab-borde.bsky.social · 03/08/2025
www.biorxiv.org/content/10.1...
biorxiv.org
RPA directly stimulates Mer3/HFM1 helicase processivity to ensure normal crossover formation in meiosis
Meiotic crossover formation is critical for generating viable gametes and enhancing genetic diversity. The helicase Mer3 (HFM1 in humans) is a highly conserved factor essential for promoting crossover...
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Reposted by Corentin Claeys Bouuaert
Valérie Borde @lab-borde.bsky.social · 01/08/2025
We are hiring! We are looking for a motivated and enthusiastic postdoc to study mammalian DSB repair using innovative genomic approaches. Our lab is at the Curie Institute in Paris and offers vibrant scientific environnement and cutting edge platforms. Please repost or apply here: lnkd.in/eJ9q3QrR
lnkd.in
Institut Curie hiring Postdoctoral Position in Mammalian DSB Repair (F/M) in Paris, Île-de-France, France | LinkedIn
Posted 8:04:09 PM. About UsInstitut Curie Research CenterInstitut Curie is a major player in the research and fight…See this and similar jobs on LinkedIn.
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Reposted by Corentin Claeys Bouuaert
Anton Goloborodko @golobor.bsky.social · 15/07/2025
We found a new asymmetry in the large-scale chromosome structure: sister chromatids are systematically shifted by hundreds of kb in the 5′→3′ direction of their inherited strands! The work was led by Flavia Corsi, in close collaboration with the Daniel Gerlich lab. www.biorxiv.org/content/10.1... 1/
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Corentin Claeys Bouuaert @ccb-lab.bsky.social · 11/07/2025
Thank you Valérie!
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Reposted by Corentin Claeys Bouuaert
Corentin Claeys Bouuaert @ccb-lab.bsky.social · 09/07/2025
We’re happy to present a new preprint from the lab, where we identify new mechanisms that drive the recruitment of Mre11 to recombination sites during meiosis. Work led by star student Priyanka Priyadarshini with help from colleagues and funded by the ERC and FNRS. www.biorxiv.org/content/10.1...
biorxiv.org
Recruitment of Mre11 to recombination sites during meiosis
The Mre11 nuclease, part of the conserved MRX complex involved in the repair of DNA double-strand breaks (DSBs), is also essential to initiate meiotic recombination in budding yeast by promoting Spo11-induced DSBs. Recruitment of Mre11 to meiotic DSB sites depends on Rec114-Mei4 and Mer2 (RMM) that organize the meiotic DSB machinery by a mechanism involving biomolecular condensation. Here, we explored the role of Mre11 during meiosis and its relationship to RMM condensation. We show that both Mre11 and MRX complexes form DNA-dependent, hexanediol sensitive condensates in vitro. In vivo, Mre11 assembles into DNA damage-dependent foci in vegetative cells and DSB-independent foci in meiotic cells. In vitro condensates and in vivo foci both depend on the C-terminal intrinsically-disordered region (IDR) of Mre11. Importantly, while the Mre11 IDR is dispensable for vegetative DNA repair it is essential during meiosis. The C-terminus of Mre11 forms a short alpha-helix that binds a conserved region of Mer2, and mutating residues within this interface reduces Mre11 foci and DSB formation. Finally, we identified a SUMO-interacting motif within the Mre11 IDR that enhances recruitment of Mre11 during meiosis and facilitates DSB formation. This work identifies multiple mechanisms that collaborate to recruit Mre11 during meiosis to initiate recombination. ### Competing Interest Statement The authors have declared no competing interest. European Research Council, 802525 Fonds National de la Recherche Scientifique, Bruxelles, BE, T.0031.22 Research Council VUB, SRP95, OZR3939 National Institute of Health, US, R01GM074223
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Corentin Claeys Bouuaert @ccb-lab.bsky.social · 09/07/2025
We’re happy to present a new preprint from the lab, where we identify new mechanisms that drive the recruitment of Mre11 to recombination sites during meiosis. Work led by star student Priyanka Priyadarshini with help from colleagues and funded by the ERC and FNRS. www.biorxiv.org/content/10.1...
biorxiv.org
Recruitment of Mre11 to recombination sites during meiosis
The Mre11 nuclease, part of the conserved MRX complex involved in the repair of DNA double-strand breaks (DSBs), is also essential to initiate meiotic recombination in budding yeast by promoting Spo11-induced DSBs. Recruitment of Mre11 to meiotic DSB sites depends on Rec114-Mei4 and Mer2 (RMM) that organize the meiotic DSB machinery by a mechanism involving biomolecular condensation. Here, we explored the role of Mre11 during meiosis and its relationship to RMM condensation. We show that both Mre11 and MRX complexes form DNA-dependent, hexanediol sensitive condensates in vitro. In vivo, Mre11 assembles into DNA damage-dependent foci in vegetative cells and DSB-independent foci in meiotic cells. In vitro condensates and in vivo foci both depend on the C-terminal intrinsically-disordered region (IDR) of Mre11. Importantly, while the Mre11 IDR is dispensable for vegetative DNA repair it is essential during meiosis. The C-terminus of Mre11 forms a short alpha-helix that binds a conserved region of Mer2, and mutating residues within this interface reduces Mre11 foci and DSB formation. Finally, we identified a SUMO-interacting motif within the Mre11 IDR that enhances recruitment of Mre11 during meiosis and facilitates DSB formation. This work identifies multiple mechanisms that collaborate to recruit Mre11 during meiosis to initiate recombination. ### Competing Interest Statement The authors have declared no competing interest. European Research Council, 802525 Fonds National de la Recherche Scientifique, Bruxelles, BE, T.0031.22 Research Council VUB, SRP95, OZR3939 National Institute of Health, US, R01GM074223
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