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Yves Brun lab

@brunlabcaulo.bsky.social
1.9K followers 907 following 142 posts

We like to look at bacteria do the things they do. Université de Montréal.

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Reposted by Yves Brun lab
Alex Merz 🇺🇸🇨🇦🇺🇦 @merz.bsky.social · 31/08/2026
@brunlabcaulo.bsky.social @gcrox.bsky.social @alisoncrissuva.bsky.social l @dr-lori-burrows.bsky.social @abaumler.bsky.social @stcmicrobeblog.bsky.social
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Yves Brun lab @brunlabcaulo.bsky.social · 29/07/2026
I don’t have the review with me but on one of the first papers I submitted from my lab, something like: « Dr. Brun should know that it is not necessary to publish every experiment done by the student. »
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Yves Brun lab @brunlabcaulo.bsky.social · 14/06/2026
Evening. Slainte!
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Yves Brun lab @brunlabcaulo.bsky.social · 12/06/2026
Great collaboration with @weisslab.bsky.social to measure Caulobacter adhesion!
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Yves Brun lab @brunlabcaulo.bsky.social · 27/03/2026
I thought you had moved to the UK for a second. 🤣 Congratulations 🎉
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Reposted by Yves Brun lab
Luiz Pedro Carvalho, PhD @luizcarvalholab.bsky.social · 25/03/2026
All currently approved antibiotics inhibit essential cellular processes. Ever wonder if we could kill bacteria using the opposite strategy? Here, we demonstrate an alternative antibacterial strategy: lethality through pathway over-activation. www.nature.com/articles/s41... (1 out of 3)
nature.com
Activation of l-histidine biosynthesis as a new antibiotic strategy against Mycobacterium tuberculosis - Nature Communications
Here, the authors report metabolic activation as a potential antimicrobial strategy against Mycobacterium tuberculosis. They show that supra-physiological activation of L-histidine biosynthesis r...
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Reposted by Yves Brun lab
Shuaiqi Guo @guo-lab.bsky.social · 25/03/2026
Our work with the Brun lab on the in situ architecture of the Caulobacter crescentus Tad pilus machine is published in mBio. Amazing collaborative effort led by James Iarocci @jamesiarocci.bsky.social
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Yves Brun lab @brunlabcaulo.bsky.social · 25/03/2026
I agree. I should meet that insightful person ;-)
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Yves Brun lab @brunlabcaulo.bsky.social · 25/03/2026
Our paper on the in situ structure of the Tad pili machine is now published in mBio journals.asm.org/eprint/D9AT2... #microsky
journals.asm.org
In situ architecture of the Tad pilus machine in Caulobacter crescentus | mBio
Investigating the Tad pilus nanomachine in a genetically tractable, non-pathogenic organism like Caulobacter crescentus provides a powerful model for elucidating the architecture and functional dynamics of this widespread system. Insights gained from studying the Tad machinery can improve our understanding of related Tad pilus systems in pathogenic bacteria such as Aggregatibacter actinomycetemcomitans, where Tad pili are a key determinant of biofilm formation and chronic infection. Additionally, the remarkable functional diversity of Tad systems, ranging from surface sensing in C. crescentus to bacterial predation in Myxococcus xanthus, highlights their broad biological relevance. By revealing the in situ architecture of the Tad pilus biosynthetic machinery, this study advances our understanding of a major class of bacterial nanomachines and may thus provide structural insights that could inform the development of new therapeutic strategies targeting pilus-mediated virulence.
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Reposted by Yves Brun lab
George O'Toole (he/him/his) @geiselbiofilm.bsky.social · 20/03/2026
New in JB: Mike Cashel is known internationally for his work on "magic spot", or (p)ppGpp, that serves as a key regulator of bacteria physiology. Hinman & Gottesman remember Dr. Cashel. journals.asm.org/doi/10.1128/... @asm.org #JBacteriol
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Reposted by Yves Brun lab
Fusion Conferences @fusionconf.bsky.social · 16/03/2026
ANNOUNCEMENT! Programme now LIVE on our website for the #ProkaryoticCellBio conference! Check it out here, a reminder that the registration deadline is 13 April!➡️https://bit.ly/4rEH9KP
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Reposted by Yves Brun lab
Aritz Roa-Eguiara @aritz-roa.bsky.social · 07/03/2026
🚨Preprint! Happy to share the research from my PhD “Genome delivery of a contractile tailed phage and its superinfection exclusion mechanism”. We use cryoEM to study the genome ejection of the phage T4, revealing how the tape measure protein regulates the process. www.biorxiv.org/content/10.6...
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Reposted by Yves Brun lab
BejaLabTechnion @bejalab.bsky.social · 04/03/2026
A jumbo cyanophage encodes the most complete ribosomal protein set in the known virosphere www.biorxiv.org/content/10.1...
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Yves Brun lab @brunlabcaulo.bsky.social · 26/02/2026
"In summary, our work indicates that the Tad ATPase CpaF alternately engages its cognate platform using distinct hexameric faces, and we define the structural and evolutionary determinants of this capacity, thus positioning the Tad system as the paradigm for a new class of bifunctional motors."
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Yves Brun lab @brunlabcaulo.bsky.social · 26/02/2026
Added bonus! Greg’s analysis identified opposing conformational changes in the motor during the ATP hydrolysis cycle that may influence whether major pilins are incorporated into or removed from the pilus filament depending on orientation.
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Yves Brun lab @brunlabcaulo.bsky.social · 26/02/2026
We tested all the other type IV filament system motors and the only other one to adopt both orientations was the archael Epd pilus. This matches the nice work from @epcrocha.bsky.social showing that Tad pili were inherited from Archaea.
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Yves Brun lab @brunlabcaulo.bsky.social · 26/02/2026
Thus, conformational changes in N-terminal helices of platform proteins dictate the orientation of the ATPase motor.
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Yves Brun lab @brunlabcaulo.bsky.social · 26/02/2026
In retraction models, these N-terminal platform protein helices intersect the space occupied by the motor CpaF N1 domain in extension models, creating steric clashes that could favor inversion of the motor.
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Yves Brun lab @brunlabcaulo.bsky.social · 26/02/2026
Comparing extension and retraction complex conformation reveals large changes in the platform proteins N-terminal helices.
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Yves Brun lab @brunlabcaulo.bsky.social · 26/02/2026
So we have strong evidence for the Tad motor flipping which face of the toroid engages with the IM platform to drive extension vs retraction. But what drives changes in orientation?
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Yves Brun lab @brunlabcaulo.bsky.social · 26/02/2026
Here is a movie of the motor-mCherry fusion.
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Yves Brun lab @brunlabcaulo.bsky.social · 26/02/2026
Adding mCherry on the retraction face of the motor also gave a retraction-deficient phenotype.
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Yves Brun lab @brunlabcaulo.bsky.social · 26/02/2026
Here is my favorite mutant. Yes, it’s a movie! Crazy, right?
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Yves Brun lab @brunlabcaulo.bsky.social · 26/02/2026
Single residue mutation of key extension orientation to platform interaction residues gave a retraction-deficient phenotype. Yes, it's a movie. Amazing!
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Yves Brun lab @brunlabcaulo.bsky.social · 26/02/2026
Here is a pili dynamics movie of wild-type.
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Yves Brun lab @brunlabcaulo.bsky.social · 26/02/2026
We aligned sequences of single- and dual-orientation motors, showing significant differences in the C-terminus, corresponding to the platform protein interaction interface in the retraction conformation models. We targeted key residues for the retraction complex formation for mutagenesis.
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Yves Brun lab @brunlabcaulo.bsky.social · 26/02/2026
In fact, Tad motors from multiple species are predicted to adopt either orientation with the IM platform. Yet some Tad motors were only modeled in one orientation. This provided a strategy to identify sequence features unique to dual-orientation motors.
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Yves Brun lab @brunlabcaulo.bsky.social · 26/02/2026
AF3 modeling says both Tad motor orientations with the IM platform are equally confident. In fact, we get either orientation when we run predictions. It’s like flipping a coin! Crazy, right?
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Yves Brun lab @brunlabcaulo.bsky.social · 26/02/2026
When you look at T4a orthologous motors, you see that they engage with the IM platform protein in opposite orientation. Here is a crazy thought: could the single Tad motor flip and engage the platform in the opposite orientation, thereby mimicking the two T4a motors? Crazy?
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Yves Brun lab @brunlabcaulo.bsky.social · 26/02/2026
Do I sound desperate yet? We were still in the dark until @gregbwhitfield.bsky.social had a genius idea.
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Yves Brun lab @brunlabcaulo.bsky.social · 26/02/2026
Some bidirectional motors achieve reversibility by swapping distinct sets of unidirectional motors with opposing activities; others utilize positionally-fixed, bifunctional motors that reverse activity by defined conformational transitions of regulatory subunits. No evidence Tad does this.
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Yves Brun lab @brunlabcaulo.bsky.social · 26/02/2026
Our work with @guo-lab.bsky.social solving the cryoET in situ structure of the Tad motor also did not give hints about how a single motor could do both jobs. Also see cryoET work by @viollierpat.bsky.social & Grant Jensen www.biorxiv.org/content/10.1...
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Yves Brun lab @brunlabcaulo.bsky.social · 26/02/2026
Structural analysis with Lynne Howell and @ianyyen.bsky.social provided strong mechanistic support for a unidirectional catalytic cycle driving pilus extension, but no clues about retraction www.nature.com/articles/s41.... Also see earlier work by @lowlab.bsky.social
nature.com
Conformational changes in the motor ATPase CpaF facilitate a rotary mechanism of Tad pilus assembly - Nature Communications
The bacterial Tad pilus extends and retracts using a single bifunctional ATPase CpaF. Here, the authors employ cryo-EM, fluorescent microscopy, and AlphaFold modelling to propose how a rotary mechanis...
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Yves Brun lab @brunlabcaulo.bsky.social · 26/02/2026
@ckellison.bsky.social tried to find a non-orthologous retraction motor without success. A genetic screen showed mutations in the motor ATP binding site reduced extension & retraction in a correlated manner. So the single ATPase does both jobs, but how? www.science.org/doi/10.1126/...
science.org
A bifunctional ATPase drives tad pilus extension and retraction
A single ATPase powers extension and retraction of a broadly distributed class of type IV pili.
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Yves Brun lab @brunlabcaulo.bsky.social · 26/02/2026
The best studied type IV pili, like the T4a Pseudomonas pili, use one ATPase to extend and one to retract. But Tad pili only have a single orthologous T4P ATPase that is required for extension. So what drives the retraction?
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Yves Brun lab @brunlabcaulo.bsky.social · 26/02/2026
Years ago, @ckellison.bsky.social developed a live cell pili labeling method to study pili dynamics. This work showed that Tad pili have dynamic cycles of extension and retraction. But how? www.science.org/doi/10.1126/...
science.org
Obstruction of pilus retraction stimulates bacterial surface sensing
Bacteria sense surfaces via the resistance imparted on retracting surface-bound pili.
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Yves Brun lab @brunlabcaulo.bsky.social · 26/02/2026
🧵 Proud to present a tour de force by postdoc @gregbwhitfield.bsky.social solving the mystery of how bacterial Tad pili can extend and retract with a single motor ATPase. Great collaboration with Lynne Howell, @dr-lori-burrows.bsky.social, @ianyyen.bsky.social www.biorxiv.org/content/10.6...
biorxiv.org
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Yves Brun lab @brunlabcaulo.bsky.social · 26/02/2026
This is a tour de force by @gregbwhitfield.bsky.social who I just convinced to join Bluesky.
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Yves Brun lab @brunlabcaulo.bsky.social · 26/02/2026
Maybe a single image is worth a thousand thread words:
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Yves Brun lab @brunlabcaulo.bsky.social · 26/02/2026
Working on a 🧵 Bacterial Tad pili extend and retract pili using a single motor ATPase with a unidirectional catalytic mechanism. We find that the Tad motor achieves bidirectionality by physical inversion; alternating which face of the ATPase toroid engages the IM platform complex. #microsky
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Yves Brun lab @brunlabcaulo.bsky.social · 19/02/2026
Weird right? It took me all those years to follow you to the dark side ;-)
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Yves Brun lab @brunlabcaulo.bsky.social · 18/02/2026
Thank you for highlighting our paper on how septal PG hydrolysis licenses a second wave of PG transpeptidation during cell separation! www.nature.com/articles/s41.... I will do a thread when the page set version is out.
nature.com
Cell wall hydrolysis promotes a second wave of transpeptidation to achieve cell separation following septation in Bacillus subtilis - Nature Communications
Cell division in many Gram-positive bacteria involves the synthesis of a peptidoglycan septum that is then hydrolyzed to facilitate cell separation. Here the authors show that, after septum formation,...
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Reposted by Yves Brun lab
Fusion Conferences @fusionconf.bsky.social · 10/02/2026
The demand for #ProkaryoticCellBio so far has been crazy! We received a record number of abstract & grant submissions, to which the conference chairs are busy reviewing! We predict poster slots & accommodation to begin filling up, don't wait until the deadline to register! More info ➡️ bit.ly/4raYCu
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Yves Brun lab @brunlabcaulo.bsky.social · 09/02/2026
Giving a seminar in Bucharest in a few minutes. #microsky
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Reposted by Yves Brun lab
Erin Goley @goleylab.bsky.social · 02/02/2026
Hey alpha aficionados - it's almost time for CauloCon 2026! This free, virtual meeting will feature talks from @brunlabcaulo.bsky.social @thanbichlerlab.bsky.social and @lamasonlab.bsky.social with opps for trainee talks. Register using the link below. 👇
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Yves Brun lab @brunlabcaulo.bsky.social · 24/01/2026
It’s warming up in Montreal 🥶☃️
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Yves Brun lab @brunlabcaulo.bsky.social · 22/01/2026
Very excited to be part of the amazing Gr-ADI Consortium to accelerate the discovery of new antibiotics. #microsky nouvelles.umontreal.ca/en/article/2...
nouvelles.umontreal.ca
Major funding for the discovery of new antibiotics
A research team co-led by UdeM's Yves Brun has received a US$3.8-million grant from the Gates Foundation to develop drugs to fight Gram-negative bacteria.
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Yves Brun lab @brunlabcaulo.bsky.social · 14/01/2026
Looking forward to having Dr. Xiaoquian (Annie) Yu join us in Montreal!
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Reposted by Yves Brun lab
Nature Microbiology @natmicrobiol.nature.com · 09/01/2026
New Microbe Matters! @relenski.bsky.social traces the legacy of Escherichia coli and how science is evolving to use this model organism in new ways #microsky www.nature.com/articles/s41...
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Reposted by Yves Brun lab
STCmicrobeblog @stcmicrobeblog.bsky.social · 11/01/2026
you may be interested to learn what Elio had to say in 2008 about an experiment he was involved in five decades earlier... #MicroSky smallthingsconsidered.blog/schaechter/2...
smallthingsconsidered.blog
A Most Per­sonal Note
by Elio — At the June General Meeting of the ASM in Boston, there was a session called 'From Bacterial Physiology to Cellular Genetics: Reflections on the 50th Anniversary of Schaechter, Maaløe, a…
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