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Böckmann Lab

@biomemphys.bsky.social
1K followers 476 following 54 posts

BioMemPhys – Theoretical & Computational Membrane Biophysics, Professor at Friedrich-Alexander University Erlangen-Nürnberg, Germany – loving biomembranes - immunology - immune domains - plasma membranes - molecular dynamics

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bioRxiv Biophysics @biorxiv-biophys.bsky.social · 10/09/2026
Large phospholipid-number asymmetry is not required to reproduce plasma membrane physical properties www.biorxiv.org/content/10.64898/20…
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Reposted by Böckmann Lab
AI x Bio Discovery @aixbiobot.bsky.social · 24/08/2026
MemBack: An Equivariant Graph Neural Network for Backmapping Lipid Membranes [new] It reconstructs CHARMM36 lipids from Martini 3 CG via heavy-atom pred. & post-processing, preserving memb. structure and organization for further sim.
Figure 1Figure 2Figure 3Figure 4
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Böckmann Lab @biomemphys.bsky.social · 12/05/2026
Our challenge tonight… #wissenbewegen @fau.de @fuhrmannlab.bsky.social @fau-go.bsky.social
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Böckmann Lab @biomemphys.bsky.social · 08/05/2026
Huge congratulations to Matthias Pöhnl on successfully defending his thesis today🎉 An impressive achievement and the culmination of a tremendous amount of hard work, persistence, and scientific curiosity. Supported by @fau.de and NHR@FAU
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Böckmann Lab @biomemphys.bsky.social · 13/04/2026
Happy to host Students from Italy, Spain, France and Germany during our international workshop on constant-pH molecular dynamics simulations @fau.de @m-a-r-i-u-s.bsky.social
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Böckmann Lab @biomemphys.bsky.social · 10/04/2026
A late Easter dinner with fantastic colleagues, great pizza, and truly insightful discussions… @fau.de
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Böckmann Lab @biomemphys.bsky.social · 23/03/2026
Looking forward to 4 days of exciting #Membrane research in #Drübeck @dgfb.bsky.social
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Reposted by Böckmann Lab
FAU Erlangen-Nbg @fau.de · 02/02/2026
Das Video zeigt, wie sich die Hülle des Fetttröpfchens bei Änderung des Umgebungs-pH-Werts nach und nach umorganisiert. Positiv geladene Aminolipide sind blau dargestellt, ungeladene Aminolipide gelb. Mehr erfahren: www.fau.de/2026/01/news... (2/2)
fau.de
Wie Impfstoff-gefüllte Fetttröpfchen ihre Fracht entlassen
Wenn die Lipidnanopartikel bei Aufnahme in die Zelle in eine saure Umgebung gelangen, organisieren sie ihre Hülle grundlegend um, zeigt eine Studie der FAU.
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Reposted by Böckmann Lab
FAU Erlangen-Nbg @fau.de · 02/02/2026
Impfstoffe und andere Medikamente werden zum Schutz oft in kleinen Fetttröpfchen verpackt, den sogenannten Lipid-Nanopartikeln. So werden sie von den Zellen aufgenommen und entlassen erst dann ihre Fracht. Um diesen Prozess zu optimieren, haben FAU-Forschende den Vorgang am Computer simuliert. (1/2)
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Reposted by Böckmann Lab
Fuhrmann Lab @fuhrmannlab.bsky.social · 30/01/2026
Today, we painted all corridors in our labs as a group effort with LOTS of help from others from the department biology @fau.de Thanks to @biomemphys.bsky.social @zaninlab.bsky.social, the cellbio and department admin for joining. It was a great effort with perfect result 🙏💪🍀
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FAU Erlangen-Nbg @fau.de · 26/01/2026
Heute am besten lieber mit Schlittenhunden zur Uni fahren 🐕‍🦺
Ein Park, der schneebedeckt ist. Eine Person geht in der Ferne durch den Schnee.
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Böckmann Lab @biomemphys.bsky.social · 18/01/2026
Now in Small: pH-dependent remodeling of #LNP membranes. #Constant-pH MD reveals effect of LNP-lipids on the LNP #pKa. Video: Membrane remodeling from pH 5 → pH 7 Blue = charged aminolipids | Yellow = neutral | Green = cholesterol #lipids @fau.de @m-a-r-i-u-s.bsky.social doi.org/10.1002/smll...
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Nachhaltig bewegen @fau-go.bsky.social · 11/12/2025
Rückblick "Cooking for Climate" www.green-office.fau.de/2025/12/11/…
Rückblick "Cooking for Climate"
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Böckmann Lab @biomemphys.bsky.social · 05/12/2025
Want to learn constant-pH MD simulations hands-on in GROMACS? Apply now for our workshop: “GROMACS for Constant-pH MD Simulations” in Erlangen @fau.de @m-a-r-i-u-s.bsky.social
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Nachhaltig bewegen @fau-go.bsky.social · 26/11/2025
🥘🌍 Cooking for Climate bei der #PublicClimateSchool 🤓😋 Heute in der Mensa Langemarckplatz. Ihr werdet staunen, wer dort gerade für euch kocht! (Was?! Um 6:30 fangen sie an?) Echte Profs aus der Biologie @nat.fau.de, Essensausgabe ab 11:00 mit @biomemphys.bsky.social und @fuhrmannlab.bsky.social
green-office.fau.de
Public Climate School 2025 @ FAU
Die Public Climate School (PCS) ist eine Aktionswoche, in der deutschlandweit vom 24. bis 30. November Bildungseinrichtungen Teile ihres Lehrprogramms so gestalten, dass sie Themen rund um die…
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Fuhrmann Lab @fuhrmannlab.bsky.social · 04/11/2025
Alle Studierende und Beschäftigte aus NAT und PHIL sollten morgen zu den Krisenversammlungen gehen und sich für eine bessere Gebäudesituation an der FAU einsetzen!
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Markus Deserno @markusdeserno.bsky.social · 26/09/2025
I am super excited to announce that we have a tenure-track faculty position in biophysics open in the Department of Physics at Carnegie Mellon! 🧪 Interfolio link: apply.interfolio.com/174360 PLEASE, share widely across the blue skies! Let me briefly explain what we're looking for: 1/10
Tenure-track Position in Biophysics at Carnegie Mellon University, Department of Physics

Location: Pittsburgh, PA
Open Date: Sep 19, 2025

Description
The Department of Physics at Carnegie Mellon University invites applications for a tenure-track faculty position in biophysics. The appointment is intended to be at the Assistant Professor level, but exceptional candidates at a higher level may also be considered. We seek outstanding candidates with a strong record in cellular and subcellular biophysics. Topics of particular interest include, but are not limited to, uncovering how key characteristics of living systems arise from the interplay between supramolecular cellular structures, how the emergent cellular circuitry defines goals and enables robust decision making, and how metabolic resources are allocated. This encompasses understanding of how information is learned, stored, transduced, and processed across subcellular structures. Applicants with theoretical, data science, or experimental backgrounds within biological physics are encouraged to apply. The ideal candidate will strengthen and extend research programs of current biophysics faculty in the Department of Physics and collaborate with broader life science activities across many departments at CMU and the wider Pittsburgh area.

More details on Interfolio: https://apply.interfolio.com/174360
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Böckmann Lab @biomemphys.bsky.social · 26/09/2025
Flammkuchentag in @biomemphys.bsky.social Lab @fau.de
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Reposted by Böckmann Lab
Marius Trollmann @m-a-r-i-u-s.bsky.social · 22/09/2025
I was pleasured to present our latest Research on titratable aminolipids at the 3rd NHR conference! 😊 #HPC #science #simulations #phd
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Böckmann Lab @biomemphys.bsky.social · 16/09/2025
3rd #AMPeL Meeting on antimicrobial peptides, this time at @fau.de, in inspiring environment of Villa Jordan, a guest house at FAU. Many thanks to Gutsmann, Grünewald and Eggeling Labs for stimulating collaboration, and @leibniz-gemeinschaft.de for support!
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Böckmann Lab @biomemphys.bsky.social · 15/09/2025
Great start of our AMPEL meeting @fau.de @m-a-r-i-u-s.bsky.social
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Reposted by Böckmann Lab
Max Planck Institute for the Science of Light (MPL) @mpi-scienceoflight.bsky.social · 10/09/2025
Lectures on Physics and Medicine Prof. Frauke Gräter, Director at the Max Planck Institute for Polymer Research in Mainz, will give her fascinating talk on September 18 at 3 pm CET. 👉 Zoom access: eu02web.zoom-x.de/j/6249564969... Meeting-ID: 624 9564 9691 Identification code: 582716
The lecture will take place at MPZPM. It will also be streamed via Zoom, as well as recorded and added to our YouTube channel for anyone who misses the talk.

▶️ Radical bursts from tissue stretch? New mechanobiology uncovered by experiments and AI
🕒 Thursday, September 18 at 3 pm CET
📍 Seminar Room 0.125 at the Max-Planck-Zentrum für Physik und Medizin, Erlangen
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Böckmann Lab @biomemphys.bsky.social · 11/09/2025
An Editor of some high-impact Journal asking for data from a mouse model - in an all-atom simulation study… Our answer:
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Böckmann Lab @biomemphys.bsky.social · 05/09/2025
Die Vorbereitungen zur Langen Nacht der Wissenschaften am 25. Oktober laufen an… #LNdW2025 @fau.de
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Böckmann Lab @biomemphys.bsky.social · 04/09/2025
We're hiring! Join our team at @fau.de ! We are seeking an enthusiastic candidate for a PhD position in our lab specializing in cutting-edge theoretical and computational membrane biophysics. Please send your CV, and a statement of research interests via email. www.biomemphys.nat.fau.de/jobs/
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Böckmann Lab @biomemphys.bsky.social · 04/09/2025
Wir suchen Dich! Die AG Computational Biology @fau.de sucht ab Jan 2026 eine Teamassistenz (m/w/d, 50% TV-L E 8). Organisation, Verwaltung & Kommunikation sind dein Ding? Dann bewirb dich bis 16.09.2025! 👉 Mehr Infos: www.jobs.fau.de/jobs/teamass...
jobs.fau.de
Teamassistenz für die Arbeitsgruppe Computational Biology (m/w/d)
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Leonhard Möckl @lmoeckl.bsky.social · 28/08/2025
Excited to see this one out in JACS! We analyzed how molecular interactions lead to self-organization of glycolipids down to microseconds and nanometer spatiotemporal scales. Amazing collaboration with the Sandoghdar lab, @biomemphys.bsky.social, and Thisbe Lindhorst! pubs.acs.org/doi/abs/10.1...
pubs.acs.org
Bottom-up Investigation of Spatiotemporal Glycocalyx Dynamics with Interferometric Scattering Microscopy
Over recent decades, the glycocalyx, an extracellular organelle composed of a multitude of glycolipids, glycoproteins, proteoglycans, and glycoRNA, has gained considerable interest in cellular biology...
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Reposted by Böckmann Lab
Marius Trollmann @m-a-r-i-u-s.bsky.social · 28/08/2025
🔔 Excited to share our latest work on the dynamics of synthetic glycolipids in model membranes! 🤩 @biomemphys.bsky.social! Bottom-up Investigation of Spatiotemporal Glycocalyx Dynamics with Interferometric Scattering Microscopy | Journal of the American Chemical Society pubs.acs.org/doi/full/10....
pubs.acs.org
Bottom-up Investigation of Spatiotemporal Glycocalyx Dynamics with Interferometric Scattering Microscopy
Over recent decades, the glycocalyx, an extracellular organelle composed of a multitude of glycolipids, glycoproteins, proteoglycans, and glycoRNA, has gained considerable interest in cellular biology. While research in this field has revealed its tremendous importance in ever more aspects of physiological and pathological cellular processes, many of the principles that govern the role of the glycocalyx in these processes on a molecular level are still unknown. In order to unravel the fundamental laws underlying glycocalyx function, new technologies are required that enable the distinction between individual subprocesses within the intricate environment of the glycocalyx. Here, we establish an experimental platform to investigate the dynamics of the glycocalyx at the nanometer and microsecond length and time scales in a bottom-up fashion. We synthesized defined oligosaccharides and installed them on supported lipid bilayers. This way, synthetic glycolipids were assembled to glycocalyx model systems with tunable properties. By investigating these tunable model systems with interferometric scattering (iSCAT) microscopy, we gain access to the required spatiotemporal resolution. We found a strong correlation between the molecular structure of several investigated model glycans and global dynamics of the system. Our findings are corroborated by atomistic molecular dynamics simulations and coarse-grained Brownian dynamics simulations. Our results provide the first direct experimental evidence on the relationship between glycan structure, organization, and dynamics, offering a robust and versatile basis for a quantitative understanding of glycocalyx biology and physics at the molecular level.
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Marius Trollmann @m-a-r-i-u-s.bsky.social · 26/08/2025
🔔🔔🔔 We’ve updated our article “Decoding pH-Driven Phase Transition of Lipid Nanoparticles” on bioRxiv! The cpHMD simulations now cover longer timescales, and we added new simulations with the molecule TNS. Could it modulate the surface charge? Read the full story: www.biorxiv.org/content/10.1...
Structure of a LNP-mimetic system at pH 7 containing mRNA.
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Fuhrmann Lab @fuhrmannlab.bsky.social · 10/06/2025
I am guest editing a #ExtracellularVesicles collection in Scientific Reports @natureportfolio.nature.com 👇 Submissions will be welcomed at any point up until 15th February 2026. www.nature.com/collections/...
nature.com
Extracellular vesicles
Aiming to boost the exploitation of extracellular vesicles in drug delivery, this collection is open to original research across all delivery aspect of EVs.
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Fuhrmann Lab @fuhrmannlab.bsky.social · 24/07/2025
Hier nochmal die Pressemeldung im Wortlaut 👇
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Böckmann Lab @biomemphys.bsky.social · 12/08/2025
🚀 Biologie, Physik & Mathematik – alles in einem Studium! 🎓 Integrated Life Sciences (ILS) an der FAU: Von Zellbiologie & Programmieren bis zu Big-Data-Analyse und moderner Mikroskopie. 📅 Bewerben bis 15. August auf www.campo.fau.de – sichere dir deinen Studienplatz! @fau.de #FAU #ILS #LifeSciences
campo.fau.de
Mein Portal - campo.fau.de
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Böckmann Lab @biomemphys.bsky.social · 04/07/2025
More excellent news: also Paolo Rossetti of @biomemphys.bsky.social won a poster award at #EBSA2025! He presented his atlas of bacterial membrane structure & dynamics @fau.de
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Böckmann Lab @biomemphys.bsky.social · 04/07/2025
Big congrats to Marius @m-a-r-i-u-s.bsky.social for winning a poster award at the #EBSA2025 congress! Well deserved!! Constant pH applied to lipid nanoparticles is cool! @fau.de
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Böckmann Lab @biomemphys.bsky.social · 03/07/2025
Another sunny day at #EBSA2025 - today with a poster on lipid nanoparticles studying different aminolipids in varying lipid mixtures employing constant pH simulations, visit the phantastic work by @m-a-r-i-u-s.bsky.social
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Böckmann Lab @biomemphys.bsky.social · 01/07/2025
My highlight today at #ebsa2025: Ilya @leventallab.bsky.social inspiring & exciting talk on asymmetric lipid composition of plasma membranes!
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Böckmann Lab @biomemphys.bsky.social · 30/06/2025
@biomemphys.bsky.social lab at #EBSA2025 in Rome! Happy to discuss recent work on membranes and LNPs at Posters and in Talk! @m-a-r-i-u-s.bsky.social @fau.de
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Böckmann Lab @biomemphys.bsky.social · 20/06/2025
🚨 New Publication Alert! 🚨 Our latest review on antimicrobial peptides (AMPs) is now out in Small! 🧬✨ We cover different mechanisms of action of AMPs with a focus on the targeting of bacterial membranes. @fau.de @m-a-r-i-u-s.bsky.social Check it out here: doi.org/10.1002/smll... #AMP #membranes
doi.org
From Membrane Composition to Antimicrobial Strategies: Experimental and Computational Approaches to AMP Design and Selectivity
Antimicrobial peptides (AMPs) are promising candidates for next-generation antibiotics, acting through mechanisms such as membrane disruption and intracellular targeting. This review examines how var....
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Böckmann Lab @biomemphys.bsky.social · 17/06/2025
How many theoreticians do you need to unmount a kitchen? @fau.de
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Böckmann Lab @biomemphys.bsky.social · 27/05/2025
Bube Dame König Ober - heute Hörsaalquiz der Biologie @fau.de
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Böckmann Lab @biomemphys.bsky.social · 25/02/2025
🌟 Ph.D./Postdoc in Computational Membrane Biophysics 🌟 Join our team at @unifau.bsky.social to study Lugdunin, a unique antimicrobial peptide, using cutting-edge simulations. Collaborate with experts, access top-tier HPC, and advance antimicrobial science. 📩 Apply: rainer.boeckmann@fau.de #membranes
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Böckmann Lab @biomemphys.bsky.social · 25/02/2025
New study alert, published in PNAS! Our team revisits lipid nanoparticle composition and structure, challenging coarse-grained simulation approaches that may mask crucial pH-driven phase transitions. Discover how setups may bias LNP structures #LNP @fau.de www.pnas.org/doi/10.1073/pnas.2422995122
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Mario Sixtus @sixtus.net · 07/01/2025
"Zuckerberg behauptet, dass die Faktenchecker, die in der Vergangenheit Hassrede und die Verbreitung von Falschbehauptungen auf seinen Netzwerken verhindert hätten, politisch nicht neutral seien." Man darf auch nicht 'neutral' sein! Soll man zu "Tötet alle Schwarzen!" sagen: "Nee, nur die Hälfte!"?
spiegel.de
Mark Zuckerberg kündigt Richtungswechsel bei Facebook und Instagram an
Kampf gegen Hetze und Fehlinformationen – diesen Prinzipien hatte sich Mark Zuckerberg einst verpflichtet. Jetzt kündigt der Meta-Chef einen neuen Kurs an, hin zu »freier Rede« – und orientiert sich a...
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Lars Hubatsch @larshubatsch.bsky.social · 07/01/2025
1/6 🧪 Preprint-Alert! We looked at how molecules move across phase boundaries, e.g., in liquid droplets, taking into account that chemical potentials inside and outside the boundary can be different! This unites recent work with stuff from the 60s and has cool consequences 👇 shorturl.at/j0U6i
biorxiv.org
Transport kinetics across interfaces between coexisting liquid phases
We investigate the kinetics of material transport across interfaces in phase-separated mixtures. Using non-equilibrium thermodynamics we derive the interfacial kinetics, describing the movement of the...
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Stefan Krauter @solarpapst.bsky.social · 05/01/2025
Im Bundestagswahlkampf sehen Parteien wie CDU, FDP, AfD und BSW den #Klimaschutz mitverantwortlich für die #Wirtschaftskrise. "Totaler Quatsch", meint Klima-Ökonom Edenhofer. Als "Industriemuseum" werde Deutschland nicht überleben. www.n-tv.de/politik/Fors...
n-tv.de
Forscher räumt mit "fataler" Wahlkampf-Erzählung auf
Im Bundestagswahlkampf sehen Parteien wie CDU, FDP, AfD und BSW den Klimaschutz mitverantwortlich für die Wirtschaftskrise. "Totaler Quatsch", meint Klima-Ökonom Edenhofer. Als "Industriemuseum" werde...
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Benoit Ladoux @bladoux.bsky.social · 26/12/2024
Thrilled to share our latest study on how mechanical forces drive cell competition! Congratulations to @andreasschoenit.bsky.social, S. Monfared, and L. Anger. Curious about active boundaries, stress fluctuations, and intercellular forces in cell competition? 👇 www.biorxiv.org/content/10.1...
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Peter Gleick @petergleick.bsky.social · 25/12/2024
If you've never donated to Wikipedia, now's the time. Elon Musk is attacking it because it's one of the only sources of honest, curated information that he can't control. www.newsweek.com/elon-musk-ta...
newsweek.com
Elon Musk takes aim at Wikipedia
The billionaire has become one of the most prominent supporters of President-elect Donald Trump.
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Böckmann Lab @biomemphys.bsky.social · 09/12/2024
🚨 Preprint Alert! 🚨 Check out our new book chapter on Constant-pH MD Simulations of Lipids! Learn how to use CpHMD simulations to study pH-dependent behavior of aminolipids in lipid nanoparticles for drug delivery. 💊🧬 #membranes #LNP @m-a-r-i-u-s.bsky.social @fau.de biorxiv.org/cgi/content/...
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Böckmann Lab @biomemphys.bsky.social · 07/12/2024
🌟 Ph.D./Postdoc in Computational Membrane Biophysics 🌟 Join our team at @unifau.bsky.social to study Lugdunin, a unique antimicrobial peptide, using cutting-edge simulations. Collaborate with experts, access top-tier HPC, and advance antimicrobial science. 📩 Apply: rainer.boeckmann@fau.de #membranes
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FAU Erlangen-Nbg @fau.de · 04/12/2024
Some impressions of yesterday's construction of a new photovoltaic system at FAU. Many thanks to everyone who helped and made the project possible in the first place. 👏👏👌 📸: FAU/Boris Mijat
Group photo with four people outdoors; there are more people in the background.Two people are standing on the roof of a building carrying a solar panel. A person carries a solar panel.
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