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Marius Trollmann

@m-a-r-i-u-s.bsky.social
28 followers 73 following 10 posts
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Reposted by Marius Trollmann
Böckmann Lab @biomemphys.bsky.social · 18/01/2026
Now in Small: pH-dependent remodeling of #LNP membranes. #Constant-pH MD reveals effect of LNP-lipids on the LNP #pKa. Video: Membrane remodeling from pH 5 → pH 7 Blue = charged aminolipids | Yellow = neutral | Green = cholesterol #lipids @fau.de @m-a-r-i-u-s.bsky.social doi.org/10.1002/smll...
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Reposted by Marius Trollmann
Böckmann Lab @biomemphys.bsky.social · 05/12/2025
Want to learn constant-pH MD simulations hands-on in GROMACS? Apply now for our workshop: “GROMACS for Constant-pH MD Simulations” in Erlangen @fau.de @m-a-r-i-u-s.bsky.social
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Marius Trollmann @m-a-r-i-u-s.bsky.social · 27/09/2025
Welcome to the cozy season! 📘📗📕📙 #booknook #bakerstreet #Moers #books
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Marius Trollmann @m-a-r-i-u-s.bsky.social · 22/09/2025
I was pleasured to present our latest Research on titratable aminolipids at the 3rd NHR conference! 😊 #HPC #science #simulations #phd
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Annika Brockschmidt @ardenthistorian.bsky.social · 16/09/2025
Ich habe über Charlie Kirks Geschäftsmodell, sein politisches Projekt und seine Radikalisierung zum rechtsextremen Aktivisten geschrieben. Mit Einordnungen und Erläuterungen von @matthewboedy.bsky.social, @bradleyonishi.bsky.social und @unddieregel.bsky.social www.volksverpetzer.de/analyse/haya...
volksverpetzer.de
Dunja Hayali hat Recht: So rechtsextrem & menschenfeindlich war Charlie Kirk
Dunja Hayali wird massiv bedroht, weil sie die Aussagen von Charlie Kirk völlig richtig als rassistisch, sexistisch und menschenfeindlich bezeichnete. Annika Brockschmidt analysiert die Ansichten des ...
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Reposted by Marius Trollmann
Böckmann Lab @biomemphys.bsky.social · 15/09/2025
Great start of our AMPEL meeting @fau.de @m-a-r-i-u-s.bsky.social
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Reposted by Marius Trollmann
Böckmann Lab @biomemphys.bsky.social · 11/09/2025
An Editor of some high-impact Journal asking for data from a mouse model - in an all-atom simulation study… Our answer:
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Reposted by Marius Trollmann
Böckmann Lab @biomemphys.bsky.social · 04/09/2025
Wir suchen Dich! Die AG Computational Biology @fau.de sucht ab Jan 2026 eine Teamassistenz (m/w/d, 50% TV-L E 8). Organisation, Verwaltung & Kommunikation sind dein Ding? Dann bewirb dich bis 16.09.2025! 👉 Mehr Infos: www.jobs.fau.de/jobs/teamass...
jobs.fau.de
Teamassistenz für die Arbeitsgruppe Computational Biology (m/w/d)
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Reposted by Marius Trollmann
Böckmann Lab @biomemphys.bsky.social · 04/09/2025
We're hiring! Join our team at @fau.de ! We are seeking an enthusiastic candidate for a PhD position in our lab specializing in cutting-edge theoretical and computational membrane biophysics. Please send your CV, and a statement of research interests via email. www.biomemphys.nat.fau.de/jobs/
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Reposted by Marius Trollmann
Böckmann Lab @biomemphys.bsky.social · 05/09/2025
Die Vorbereitungen zur Langen Nacht der Wissenschaften am 25. Oktober laufen an… #LNdW2025 @fau.de
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Reposted by Marius Trollmann
Ruprecht Polenz @polenz.bsky.social · 29/08/2025
Unfortunately, not everyone who needs these treatments takes advantage of them #Trump #Vance
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Marius Trollmann @m-a-r-i-u-s.bsky.social · 28/08/2025
🔔 Excited to share our latest work on the dynamics of synthetic glycolipids in model membranes! 🤩 @biomemphys.bsky.social! Bottom-up Investigation of Spatiotemporal Glycocalyx Dynamics with Interferometric Scattering Microscopy | Journal of the American Chemical Society pubs.acs.org/doi/full/10....
pubs.acs.org
Bottom-up Investigation of Spatiotemporal Glycocalyx Dynamics with Interferometric Scattering Microscopy
Over recent decades, the glycocalyx, an extracellular organelle composed of a multitude of glycolipids, glycoproteins, proteoglycans, and glycoRNA, has gained considerable interest in cellular biology. While research in this field has revealed its tremendous importance in ever more aspects of physiological and pathological cellular processes, many of the principles that govern the role of the glycocalyx in these processes on a molecular level are still unknown. In order to unravel the fundamental laws underlying glycocalyx function, new technologies are required that enable the distinction between individual subprocesses within the intricate environment of the glycocalyx. Here, we establish an experimental platform to investigate the dynamics of the glycocalyx at the nanometer and microsecond length and time scales in a bottom-up fashion. We synthesized defined oligosaccharides and installed them on supported lipid bilayers. This way, synthetic glycolipids were assembled to glycocalyx model systems with tunable properties. By investigating these tunable model systems with interferometric scattering (iSCAT) microscopy, we gain access to the required spatiotemporal resolution. We found a strong correlation between the molecular structure of several investigated model glycans and global dynamics of the system. Our findings are corroborated by atomistic molecular dynamics simulations and coarse-grained Brownian dynamics simulations. Our results provide the first direct experimental evidence on the relationship between glycan structure, organization, and dynamics, offering a robust and versatile basis for a quantitative understanding of glycocalyx biology and physics at the molecular level.
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Marius Trollmann @m-a-r-i-u-s.bsky.social · 26/08/2025
🔔🔔🔔 We’ve updated our article “Decoding pH-Driven Phase Transition of Lipid Nanoparticles” on bioRxiv! The cpHMD simulations now cover longer timescales, and we added new simulations with the molecule TNS. Could it modulate the surface charge? Read the full story: www.biorxiv.org/content/10.1...
Structure of a LNP-mimetic system at pH 7 containing mRNA.
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Reposted by Marius Trollmann
Böckmann Lab @biomemphys.bsky.social · 30/06/2025
@biomemphys.bsky.social lab at #EBSA2025 in Rome! Happy to discuss recent work on membranes and LNPs at Posters and in Talk! @m-a-r-i-u-s.bsky.social @fau.de
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Reposted by Marius Trollmann
Böckmann Lab @biomemphys.bsky.social · 20/06/2025
🚨 New Publication Alert! 🚨 Our latest review on antimicrobial peptides (AMPs) is now out in Small! 🧬✨ We cover different mechanisms of action of AMPs with a focus on the targeting of bacterial membranes. @fau.de @m-a-r-i-u-s.bsky.social Check it out here: doi.org/10.1002/smll... #AMP #membranes
doi.org
From Membrane Composition to Antimicrobial Strategies: Experimental and Computational Approaches to AMP Design and Selectivity
Antimicrobial peptides (AMPs) are promising candidates for next-generation antibiotics, acting through mechanisms such as membrane disruption and intracellular targeting. This review examines how var....
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Reposted by Marius Trollmann
Böckmann Lab @biomemphys.bsky.social · 17/06/2025
How many theoreticians do you need to unmount a kitchen? @fau.de
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Reposted by Marius Trollmann
Böckmann Lab @biomemphys.bsky.social · 25/02/2025
New study alert, published in PNAS! Our team revisits lipid nanoparticle composition and structure, challenging coarse-grained simulation approaches that may mask crucial pH-driven phase transitions. Discover how setups may bias LNP structures #LNP @fau.de www.pnas.org/doi/10.1073/pnas.2422995122
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Reposted by Marius Trollmann
Florian Aigner @florianaigner.at · 15/01/2025
Ich habe zusammen mit ChatGPT ein Sonett über die Bedrohung der Demokratie durch Tech-Bros geschrieben. Und jetzt weiß ich auch nicht mehr, was ich denken soll.
The fragile flame of freedom flickers low,
Its steady light consumed by shadows deep.
Where once the people's will had room to grow,
Now gilded towers rise while dreamers sleep.
The streets grow quiet as the markets roar,
The people lost in digital despair.
No votes, no voice, but data to adore,
Their power grows while we must gasp for air.
Will oligarchs decide the terms of hate,
And leave us slaves within their gilded dreams?
Shall silicon and dollars write our fate,
And bind us all and glue us to their screens?
Beware, for tech may burn our hope to dust—
In circuits cold, no justice can we trust.
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Reposted by Marius Trollmann
Böckmann Lab @biomemphys.bsky.social · 09/12/2024
👉 Please have a look at the accompanying paper too! biorxiv.org/cgi/content/...
biorxiv.org
Mechanistic Insight into pH-Driven Phase Transition of Lipid Nanoparticles
Lipid nanoparticles (LNPs) are essential delivery vehicles in mRNA-based vaccines, with their functionality largely governed by aminolipids. At low pH, protonated aminolipids facilitate efficient mRNA...
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Reposted by Marius Trollmann
Böckmann Lab @biomemphys.bsky.social · 09/12/2024
🚨 Preprint Alert! 🚨 Check out our new book chapter on Constant-pH MD Simulations of Lipids! Learn how to use CpHMD simulations to study pH-dependent behavior of aminolipids in lipid nanoparticles for drug delivery. 💊🧬 #membranes #LNP @m-a-r-i-u-s.bsky.social @fau.de biorxiv.org/cgi/content/...
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Reposted by Marius Trollmann
bioRxiv Biophysics @biorxiv-biophys.bsky.social · 29/11/2024
Mechanistic Insight into pH-Driven Phase Transition of Lipid Nanoparticles www.biorxiv.org/content/10.1101/202…
biorxiv.org
Mechanistic Insight into pH-Driven Phase Transition of Lipid Nanoparticles https://www.biorxiv.org/content/10.1101/2024.11.27.625717v1
Lipid nanoparticles (LNPs) are essential delivery vehicles in mRNA-based vaccines, with their functi
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Reposted by Marius Trollmann
Böckmann Lab @biomemphys.bsky.social · 07/12/2024
Details at www.biomemphys.nat.fau.de/jobs/
biomemphys.nat.fau.de
Jobs
Posted on 25.11.2024 We are seeking enthusiastic candidates for Ph.D. positions in our lab specializing in cutting-edge theoretical and computational membrane biophysics. Our research delves into the…
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Reposted by Marius Trollmann
Böckmann Lab @biomemphys.bsky.social · 07/12/2024
🌟 Ph.D./Postdoc in Computational Membrane Biophysics 🌟 Join our team at @unifau.bsky.social to study Lugdunin, a unique antimicrobial peptide, using cutting-edge simulations. Collaborate with experts, access top-tier HPC, and advance antimicrobial science. 📩 Apply: rainer.boeckmann@fau.de #membranes
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Reposted by Marius Trollmann
Böckmann Lab @biomemphys.bsky.social · 03/12/2024
🔑 Topics include: • Membrane-targeting strategies of AMPs • Composition, structure, and dynamics of bacterial membranes versus eukaryotic membranes • AMPs design and discovery: From natural peptides to therapeutics
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Reposted by Marius Trollmann
Böckmann Lab @biomemphys.bsky.social · 03/12/2024
🚨 Review Preprint Alert 🚨 Discover how computational and experimental tools are employed in antimicrobial peptide (AMP) research for combating bacteria. Great Collaboration with Eggeling and Gutsmann Labs Read now on chemRxiv #AntimicrobialPeptides #membranes @fau.de chemrxiv.org/engage/chemr...
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Reposted by Marius Trollmann
Böckmann Lab @biomemphys.bsky.social · 05/12/2024
🚨 Preprint Alert 🚨pH-induced phase transitions in lipid nanoparticle (LNP) formulations are crucial for LNP function – but not all settings in MD simulations allow to observe these transitions... #membranes #LNP @fau.de arxiv.org/abs/2412.02731
Phase transition of LNP lipid formulation
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Reposted by Marius Trollmann
Böckmann Lab @biomemphys.bsky.social · 29/11/2024
Preprint alert! 🚨 "To be protonated or not to be protonated? That is the question! 🤔 In our latest study, we used constant-pH simulations to uncover the dynamic (de)protonation of ionizable aminolipids in Lipid Nanoparticles (LNPs). #membranes @fau.de
LNP-mimetic membrane with mRNA (red)
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Reposted by Marius Trollmann
Böckmann Lab @biomemphys.bsky.social · 29/11/2024
🧪 With hundreds of titratable sites, we explored how these key components behave in the BioNTech & Pfizer LNP formulation. Our findings reveal a fascinating pKa shift by more than 3 units and resolve a position-dependent protonation of aminolipids. biorxiv.org/cgi/content/...
biorxiv.org
Mechanistic Insight into pH-Driven Phase Transition of Lipid Nanoparticles
Lipid nanoparticles (LNPs) are essential delivery vehicles in mRNA-based vaccines, with their functionality largely governed by aminolipids. At low pH, protonated aminolipids facilitate efficient mRNA...
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Reposted by Marius Trollmann
Böckmann Lab @biomemphys.bsky.social · 22/11/2024
Very grateful for research funding granted by #DFG to study antimicrobial peptide Lugdunin's selectivity for gram-positive bacteria. Thrilled to continue collaboration with Steinem Lab, Göttingen. Insights could pave the way for new strategies against resistant infections. @UniFAU
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Brady Johnston @bradyajohnston.bsky.social · 13/11/2024
Manged to get NVIDIA's GPU physics solver Warp running interactively inside of Blender. This is 500,000 particles simulating ON THE GPU and taking live inputs from the viewport #b3d #GeometryNodes
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Böckmann Lab @biomemphys.bsky.social · 11/12/2023
🌟 Matthias Pöhnl & @MTrollmann reveal cholesterol's paradox in membranes: it both thickens and softens. Insights into this balancing act of rigidity and flexibility in Nat. Comm #FAU #membranes www.nature.com/articles/s41...
nature.com
Nonuniversal impact of cholesterol on membranes mobility, curvature sensing and elasticity - Nature ...
Cholesterol both thickens and condenses membranes, yet it also softens them under certain conditions. Here, authors uncover cholesterol’s dual role in the delicate balance of rigidity and flexibilit...
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