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Bernat Gel

@bernatgel.bsky.social
110 followers 195 following 11 posts

Bioinformatician working on Cancer Genomics at IGTP. Focused on Neurofibromatosis Type 1, Sarcomas and other rare tumors. Developer of analysis and data visualization tools in R. #endNF #rstats #karyoploteR #regioneR #bioconductor #genomics #cancer

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Bernat Gel @bernatgel.bsky.social · 22/06/2026
Very happy to share our new paper in Nature Communications. We used a human isogenic iPSC-derived neural crest model to reconstruct NF1-associated tumour progression and study how successive genetic alterations reshape cell identity in this rare disease. #NF1 #MPNST #genomics @natcomms.nature.com
 Immunohistochemical comparison of 1KO, 2KO, and 3KO tumor models showing H3K27me3, SOX10, S100B, Vimentin, and Ki67 expression.
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Nature Communications @natcomms.nature.com · 18/06/2026
An induced pluripotent stem cells-derived NF1-CDKN2A-PRC2-deficient model mimics malignant peripheral nerve sheath tumors, and can be used for drug combinations discovery doi.org/10.1038/s414...
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Keith Robison @omicsomics.bsky.social · 26/01/2026
ONT Axes P2 Solo, Roiling Community 🧬🖥️ omicsomics.blogspot.com/2026/01/ont-...
omicsomics.blogspot.com
ONT Axes P2 Solo, Roiling Community
Oxford Nanopore has a serious case of user community unrest, triggered by the announcement that the P2 Solo (aka P2s) will be phased out sta...
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Kim Lane Scheppele @kimlanelaw.bsky.social · 10/12/2025
All travelers from ESTA countries (yes the ones on visa waiver programs) will have to disclose 5 years of social media + huge amounts of personal data to enter the US now. All US academic associations should now meet outside the US if we want to meet our international colleagues.
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Tomeu Pinya @tomeupinya.bsky.social · 07/06/2025
Voy a fijarme esto, echadle un ojo que es una pasada, y no porque lo haya dibujado yo 😊
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Bioconductor @bioconductor.bsky.social · 20/05/2025
🎓 EuroBioC2025 Bioconductor Carpentry Workshops – registration now open! 📍 Barcelona | 📅 15–16 Sept 2025 Bulk & single-cell RNA-seq analysis with expert instructors. 🔗 eventum.upf.edu/go/eurobioc2... #EuroBioC2025 #RNAseq #Bioinformatics #RStats
eventum.upf.edu
Bioconductor Carpentry Workshops
Right before EuroBioC2025 starts, on Monday and Tuesday 15th and 16th of September, the Bioconductor training committee organizes the following two-day Bioconductor Carpentry Workshops: Analysis…
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Jason Moore @moorejh.bsky.social · 24/04/2025
The University of Alabama at Birmingham (UAB) Department of Biomedical Informatics and Data Science (DBIDS) is seeking outstanding candidates for faculty positions in the field of biomedical informatics uab.peopleadmin.com/postings/25027 #bioinformatics #datascience
uab.peopleadmin.com
School of Medicine - Open Rank - Open Tenure - Department of Biomedical Informatics and Data Science
The University of Alabama at Birmingham (UAB) Department of Biomedical Informatics and Data Science (DBIDS) is seeking outstanding candidates for faculty positions in the field of biomedical informati...
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Tomeu Pinya @tomeupinya.bsky.social · 22/04/2025
Demà estaré signant "Loquis" a la paradeta de Dolmen. Veniu-me a veure i emporteu-vos un dibuixet!
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Cas Simons @cassimons.bsky.social · 11/04/2025
Are you an experienced Bioinformatician looking to make a real-world impact for families living with rare disease? Love team science and working at scale? Remote-first (NSW, VIC or QLD). Join me, @dgmacarthur.bsky.social, and the CPG Rare Disease Program: career10.successfactors.com/career?caree...
career10.successfactors.com
Career Opportunities: Rare Disease Bioinformatician (42637)
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isidrolauscher.bsky.social @isidrolauscher.bsky.social · 04/04/2025
We have two #postdoc positions open to join my team at @ebi.embl.org in beautiful Cambridge! We are a mission-driven, highly collaborative and dynamic team located at the Wellcome Genome Campus, one of the most exciting hubs in the world focused on biomedical research 👇
embl.wd103.myworkdayjobs.com
Postdoctoral Fellow
Your group The Cortes-Ciriano group studies the mutational processes and mechanisms of genome instability underpinning tumourigenesis, immune escape, and drug response through the analysis of high-thr...
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Bernat Gel @bernatgel.bsky.social · 19/03/2025
Al grup de Bioinformàtica i Genòmica Translacional del Càncer de @igtp.bsky.social a Badalona estem buscant un bioinfo junior per a treballar en diversos projectes de genòmica del càncer. Amb possibilitats de fer també el PhD si aconseguim junts finançament. Info: igtp.jobs.personio.com/job/2023198
igtp.jobs.personio.com
2025_39_JUNIOR BIOINFORMATICIAN_Translational Genomics and Bioinformatics of Cancer | Jobs at IGTP
The Germans Trias i Pujol Research Institute (IGTP) is a public research centre located in Badalona. Its main objective is to increase scientific knowledge in order to transform it into solutions to i...
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Bernat Gel @bernatgel.bsky.social · 19/03/2025
My group at the @igtp.bsky.social is looking for a Junior Bioinformatician to help us work on several cancer genomics projects. We have funding for 2025 for this position, but will apply together for funding for a full PhD. Info and application: igtp.jobs.personio.com/job/2023198 or contact me! 😃
igtp.jobs.personio.com
2025_39_JUNIOR BIOINFORMATICIAN_Translational Genomics and Bioinformatics of Cancer | Jobs at IGTP
The Germans Trias i Pujol Research Institute (IGTP) is a public research centre located in Badalona. Its main objective is to increase scientific knowledge in order to transform it into solutions to i...
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Taylor Sundby, MD 🧬🖥️ 🎗️ @rtsundby.bsky.social · 11/03/2025
The proposed Continuing Resolution bill, up for vote today, cuts the Congressionally Directed Medical Research Program (CDMRP) by 57%. CDMRP is one of our nation’s most important investments in med research including #cancer (pediatric, #nf ), #autism, #substanceabuse, #chronicpain
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Darby Saxbe @darbysaxbe.bsky.social · 04/02/2025
🚨BREAKING. From a program officer at the National Science Foundation, a list of keywords that can cause a grant to be pulled. I will be sharing screenshots of these keywords along with a decision tree. Please share widely. This is a crisis for academic freedom & science.
list of banned keywords
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Ensembl @ensembl.org · 14/01/2025
Join us for our first webinar of 2025, where we will introduce you to the new Ensembl browser and demonstrate how to navigate the website to retrieve genomic data. Registration is free but essential: tinyurl.com/4bb4m8e4 #Bioinformatics #Ensembl #EMBL-EBI @training.ebi.embl.org
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Ana Maria Barral @bioprof.bsky.social · 13/01/2025
🧪 let's see the impact of 🔵 sky for finding expertise! My dept is in ASAP need of somebody with bioinformatics expertise to provide content for several course developments. Work is remote and contract, courses will be online asynch. Courses are for bio and data science majors. Pls spread the word! 🙏
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Ava Draw @avadraw.bsky.social · 07/01/2025
Es habitual "ocultar" el embarazo el primer trimestre por si ocurre un aborto espontáneo. Ninguna mujer quiere añadir a su duelo las especulaciones de otros juzgando su edad o si trabaja demasiado. Nunca nadie pregunta por los hábitos del padre...
Artículo de Lund University: "Defective sperm doubles the risk of preeclampsia"Artículo de The Guardian: Damaged sperm could be to blame for repeated miscarriages
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Ted Bittgenstein Falken @bittgenstein.net · 22/12/2024
Es la rehostia. La única alternativa parece ser no juntarse con hombres.
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Mark @hotheadedbab.bsky.social · 19/12/2024
I was wanting to try to get my socials out there. My user is @hotheadedbab nearly everywhere. Here’s my socials I’m on the most. I draw! I also make videos! I would appreciate it if you checked it out. Got a video specifically where I’m talking about my experience with NF2. youtu.be/duWxo6_xyXM?...
youtu.be
(Captions) Taking time to Explain my experience with NF2. (Neurofibromatosis Type 2)
YouTube video by 𝚑𝚘𝚝𝚑𝚎𝚊𝚍𝚎𝚍𝚋𝚊𝚋
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Marc Robinson-Rechavi @marcrr.bsky.social · 10/12/2024
😱“Our observations now show that the Arctic tundra, which is experiencing warming and increased wildfire, is now emitting more carbon than it stores, which will worsen climate change impacts.” fediscience.org/@ZLabe/11363...
fediscience.org
Zack Labe (@ZLabe@fediscience.org)
Attached: 1 image 🧵 Our annual NOAA Arctic Report Card is available today for 2024. It discusses recent changes in the #Arctic, extreme events, and broader human/environmental impacts. + Report: htt...
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IRB Barcelona @irbbarcelona.org · 10/12/2024
📢 We are #hiring! 🟠 Postdoctoral Fellows @batllelab.bsky.social, Patrick Aloy 🟠Research Assistant/Bioinformatician @bbglab.bsky.social 🟠 Research Officers: #Bioinformatics/ Biostatistics, #Histopathology 🟠 Public Procurement Officers 🟠 Academic Officer ➕ℹ️here➡️http://bit.ly/3MR4wO8 #IRBJobs 🧪
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Davis McCarthy @davisjmcc.bsky.social · 10/12/2024
Have you been thinking hard about statistical modelling of scATAC-seq data? (No.) Luckily for you, @aaronkwc.bsky.social has! Aaron will help you grok: What's going on? What is TF-IDF? Is there really single-cell level chromatin information? Check it out 👇 www.biorxiv.org/content/10.1... 🧪🧬💻
biorxiv.org
Going beyond cell clustering and feature aggregation: Is there single cell level information in single-cell ATAC-seq data?
Single-cell Assay for Transposase Accessible Chromatin with sequencing (scATAC-seq) has become a widely used method for investigating chromatin accessibility at single-cell resolution. However, the re...
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Nuria Lopez-Bigas @nlbigas.bsky.social · 09/12/2024
**Clinical Cancer Genomics Conference** First of an annual recurring series. It will be a very important meeting for the advance of clinical implementation of cancer genomics. Proud to be part of it. March 20th-21st 2025 in Amsterdam. Registration open: www.ccg2025.eu #CCG2025
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Fritz Roth @fritzroth.bsky.social · 20/11/2024
Calling all systems and computational biologists in search of a faculty position: We have Assistant and Associate Professor positions! 🚀 Pittsburgh is beautiful, and we are doing amazing science here. cfopitt.taleo.net/careersectio... cfopitt.taleo.net/careersectio... Please apply by Dec 2!
cfopitt.taleo.net
Faculty.Professor.Assistant - Full-Time
Click the link provided to see the complete job description.
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Bernat Gel @bernatgel.bsky.social · 19/11/2024
Just moved from the other side... So happy to find the #genomics and #rstats communities I used to love are alive and well! 😀 Should have moved much earlier! What a difference!
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Eileen Furlong @eileen-furlong.bsky.social · 18/11/2024
My first post on Blue Sky - moving over ! For all post-docs out there - fantastic opportunity @EMBL. Independent group leader position: Core funding, state-of-the-art core facilities, access to fantastic Ph.D. students, and of course amazing colleagues. Please apply www.embl.org/jobs/positio...
embl.org
EMBL Jobs
We offer a wide range of challenging scientific and non-scientific positions at all of our European locations and encourage applications from international candidates at all career levels.
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