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isidrolauscher.bsky.social

@isidrolauscher.bsky.social
255 followers 510 following 42 posts
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isidrolauscher.bsky.social @isidrolauscher.bsky.social · 09/12/2025
Most honoured and thankful for receiving funding from the @erc.europa.eu for the #ERCCoG project BrokenChromosomes! We will investigate how scrambled chromosomes in cancer cells arise to drive aggressive disease @embl.org @ebi.embl.org @sangerinstitute.bsky.social @cancerresearchuk.org
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Francesco Iorio @francescoiorio.bsky.social · 17/09/2025
📢 The 2nd European Cancer Dependency Map Symposium is coming! 🗓️ 20 Nov 2025 📍 Human Technopole, Milan Join us for a one-day dive into: 🔹 Cancer genomics 🔹 CRISPR screening 🔹 AI-driven target discovery With the patronage of AIRC 🔗 humantechnopole.it/en/trainings...
humantechnopole.it
2nd European Cancer Dependency Map Symposium - Human Technopole
The 2nd European Cancer Dependency Map Symposium is a scientific event open to the national and international scientific community working in computational genomics, pharmacogenomics, and therapeutic ...
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isidrolauscher.bsky.social @isidrolauscher.bsky.social · 21/07/2025
Very glad to see this preprint by @lh3lh3.bsky.social and Meyerson labs www.biorxiv.org/content/10.1... confirming our finding of artifactual fold-back inv in long reads (Fig S1 in our @natmethods.nature.com‬ paper presenting SAVANA, which filters such artifacts to improve SV calling 👇
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EMBL-EBI @ebi.embl.org · 29/05/2025
Work by researchers in the group of @isidrolauscher.bsky.social at EMBL-EBI, the R&D lab of @genomicsengland.bsky.social, in collaboration with clinical partners at @ucl.ac.uk, Royal National Orthopaedic Hospital, Instituto de Medicina Molecular João Lobo Antunes, and Boston Children’s Hospital.
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isidrolauscher.bsky.social @isidrolauscher.bsky.social · 30/05/2025
Very well done indeed @hbelrick.bsky.social ! 😀
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Jose Espejo Valle-Inclan @jevalleinclan.bsky.social · 29/05/2025
SAVANA is out in the wild 🦁! #SAVANA detects haplotype-resolved somatic structural variants (SVs), copy number aberrations, and calculates tumour purity and ploidy using long-read data. Together with it, a robust, data-driven benchmarking effort! Below is a thread with all the advantages 👇
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isidrolauscher.bsky.social @isidrolauscher.bsky.social · 28/05/2025
Thrilled to see #SAVANA out in @natmethods.nature.com 🥳 SAVANA detects haplotype-resolved somatic SVs, copy number aberrations & infers tumour purity & ploidy using long-read sequencing with or WITHOUT a matched germline control 👇https://www.nature.com/articles/s41592-025-02708-0
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Nature Reviews Cancer @natrevcancer.nature.com · 04/03/2025
In this #ToolsoftheTrade article, @timcoorens.bsky.social describes the development of #SComatic, an algorithm enabling the detection of somatic mutations in single cell sequencing data, & its use to study lineage relations + mutational signatures. Read about it here 👇 bit.ly/4kyM7...
bit.ly
Detecting somatic mutations in single-cell data with SComatic - Nature Reviews Cancer
In this Tool of the Trade article, Tim Coorens describes the development of SComatic, an algorithm enabling the detection of somatic mutations in single-cell RNA- or ATAC-sequencing data, and its use to study lineage relations and mutational signatures.
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isidrolauscher.bsky.social @isidrolauscher.bsky.social · 04/04/2025
We have two #postdoc positions open to join my team at @ebi.embl.org in beautiful Cambridge! We are a mission-driven, highly collaborative and dynamic team located at the Wellcome Genome Campus, one of the most exciting hubs in the world focused on biomedical research 👇
embl.wd103.myworkdayjobs.com
Postdoctoral Fellow
Your group The Cortes-Ciriano group studies the mutational processes and mechanisms of genome instability underpinning tumourigenesis, immune escape, and drug response through the analysis of high-thr...
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Lorenzo de la Rica @ldelarica.bsky.social · 24/02/2025
Very excited to share the stellar speaker line-up at our ecDNA conference this June in London! 👇 If you're interested in #ecDNA and want to hear or present groundbreaking research, register now. Abstract submission deadline is 14 March. Learn more: www.cancergrandchallenges.org/ecDNA-2025
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Lisa Situ @lisasitu.bsky.social · 06/02/2025
🧬 #ResearchWatch: Loss–Translocation–Amplification #Chromothripsis Drives #Osteosarcoma Evolution, a summary of the study by @jevalleinclan.bsky.social, Solange De Noon, Adrienne Flanagan, Isidro Cortes-Ciriano, and colleagues @ucl.ac.uk @ebi.embl.org @uclnews.bsky.social doi.org/10.1158/2159...
doi.org
Loss–Translocation–Amplification Chromothripsis Drives Osteosarcoma Evolution
Main Finding: High-grade osteosarcomas frequently exhibit a loss–translocation–amplification (LTA) pattern of chromothripsis that inactivates TP53 and amplifies oncogenes.Concept: Ongoing chromothrips...
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