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Farhan Anwar

@anwarsolutions.bsky.social
1.6K followers 732 following 109 posts

Infectious disease microbiologist 🔹Proud Girl Dad🔹 Interested in developing novel antimicrobial therapies 🔹 Currently working on C. difficile and other HA pathogens 🦠🔬🧫 🔹 Opinions my own (He/Him) 🔹 #Cdifficile #cdiff #Microsky #microbiology #IDSky

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Reposted by Farhan Anwar
Wiep Klaas Smits (ExpBac/CMAT) @smitslab.bsky.social · 15/05/2026
The phenotypic landscape of the model firmicute Bacillus subtilis www.biorxiv.org/content/10.6...
biorxiv.org
The phenotypic landscape of the model firmicute Bacillus subtilis
Firmicutes are gram-positive bacteria with important roles in human health, disease, and industry. However, more than a quarter of genes in the model firmicute Bacillus subtilis remain completely uncharacterized, including numerous core phylum-specific genes. Here, we design a compact pooled CRISPRi library targeting all protein-coding genes in B. subtilis and test its growth in ~150 stress conditions. Using data from this screen as a hypothesis generator, we perform targeted experiments that reveal that YneF, a conserved essential firmicute protein, plays a role in the SRP co-translational protein secretion pathway. We also demonstrate that ECF-transporters play a previously unknown but broadly conserved role in cell wall homeostasis, perform an unbiased analysis of amino acid crossfeeding, and make additional discoveries about bacterial competition and about the cell wall of B. subtilis. In addition to these major contributions to our understanding of B. subtilis (and gram-positive firmicutes in general), this work provides a rich dataset that will nucleate future studies of uncharacterized genes and presents a framework for accessible full-genome functional genomic screens in other bacteria. ### Competing Interest Statement The authors have declared no competing interest. National Institutes of Health, https://ror.org/01cwqze88, R35 GM118061 The University of Queensland, https://ror.org/00rqy9422
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Farhan Anwar @anwarsolutions.bsky.social · 22/04/2026
New book on Clostridioides difficile is out! Clostridioides difficile: Diagnostic and Clinical Perspectives (doi.org/10.1201/9781... ) I had the privilege to write Chapter 1: C. difficile-Restrictive and -Permissive Gut Microbiomes. #cdiff #IDsky
doi.org
Clostridioides difficile | Diagnostic and Clinical Perspectives | Glen
This book is a practical guide for clinicians and other healthcare providers on a holistic approach to understanding and managing Clostridioides difficile
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Farhan Anwar @anwarsolutions.bsky.social · 27/03/2026
Don't you love it when you're having a great morning drive to school and your toddler hits you with the "Dad when I become a grown up are you going to die?"
media.tenor.com
a man with long hair is sitting in front of a painting
ALT: a man with long hair is sitting in front of a painting
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Farhan Anwar @anwarsolutions.bsky.social · 27/03/2026
My cat has decided to take the baby lounger as his bed. Never mind that I've bought cat beds his entire life, none of which he used. Stupid adorable cat.
My dumb cat using my newborns lounger as his new bed
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Reposted by Farhan Anwar
lauren @lauren.rotatingsandwiches.com · 26/03/2026
war_iran_final-blow_v1.pdf war_iran_final-final-blow-v2.pdf war_iran_final-blow-no edits.pdf war_iran_final-blow-no edits (1).pdf war_iran_final-blow-no edits (1) APPROVED.pdf IRANWARPLANSFINALFINALFINAL.pdf IRANWARPLANSFINALFINALFINAL (1).pdf
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Farhan Anwar @anwarsolutions.bsky.social · 26/03/2026
Nope. She was talking about habitats and the train tracks a train's habitat. I told her she used the wrong word and all she said was "Okay. Do you know what infinity +100 is?"
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Farhan Anwar @anwarsolutions.bsky.social · 25/03/2026
5 year old: Do you want to ask me about the world? Me: Sure, what can you tell me about trains? 5 y.o.: Oh that's a good question. Trains have enemies. Me: 🤔
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Farhan Anwar @anwarsolutions.bsky.social · 10/12/2025
Starter lab. sciencegrit.com #AcademicSky #ScienceSky
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Farhan Anwar @anwarsolutions.bsky.social · 17/10/2025
Guys, my lab published a cool tool for hypothesis generation from large omics datasets. Go check it out, it's really cool. #cdifficile #cdiff www.sciencedirect.com/science/arti...
sciencedirect.com
CAT-GxD: Centralized Access to Gene Expression Datasets
Extensive multi-omic bacterial gene expression datasets are publicly available, but tools that unify these datasets for interpretation and hypothesis-…
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Farhan Anwar @anwarsolutions.bsky.social · 11/07/2025
The bare minimum we should all strive for.
A person with the professional title "Appropriate Adult"
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Farhan Anwar @anwarsolutions.bsky.social · 07/07/2025
How prevalent are bacteria and microbes in kidney stones? What is the best method to detect them? What are the clinical implications of it? Check it out in our new publication from a very interesting collaboration. #microbiology #NephroSky #Kidney journals.asm.org/doi/10.1128/...
journals.asm.org
Bead beating demonstrates enhanced bacterial detection in kidney stone culture compared to traditional mortar-pestle processing | Microbiology Spectrum
This study provides a rapid and standardized method for kidney stone culture using bead beating, which significantly improves microbial detection compared to traditional mortar-pestle techniques. This method accelerates processing and enhances sensitivity ...
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Farhan Anwar @anwarsolutions.bsky.social · 15/06/2025
[Daughter]: how do you get allergies? [Me]: well, allergies are your body's reaction to ----- [Daughter]: OOH A PRETTY ROCK! Lol, never change kid. Happy Father's Day everyone.
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Farhan Anwar @anwarsolutions.bsky.social · 03/05/2025
You know you're in Tucson when...
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Reposted by Farhan Anwar
Kathleen Bachynski @bachynski.bsky.social · 23/04/2025
“The spread of measles in the Southwest now constitutes the largest single outbreak since the United States declared the disease eliminated in 2000, federal scientists told state officials… the current tally is likely to be higher because it takes time for the agency to collate state reports.”
nytimes.com
Measles Surge in Southwest Is Now the Largest Single Outbreak Since 2000
Growing case numbers suggest that the national total will surpass that seen during the last large outbreak in 2019.
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Barack Obama @barackobama.bsky.social · 23/03/2025
Figured I’d hop on here today for the 15th anniversary of the Affordable Care Act. With everything going on right now, it’s easy to feel like regular folks can’t make a difference – but the ACA is a reminder that change is possible when we fight for progress.
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Reposted by Farhan Anwar
Chris Hayes @chrislhayes.bsky.social · 13/03/2025
The institutional Democratic Party is guided by an almost pathological level of conflict avoidance in almost every direction. “What can we do to make the least number of people mad?” is just a bankrupt way to operate.
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Farhan Anwar @anwarsolutions.bsky.social · 13/03/2025
@bungiehelp.bungie.net Hey, is something going on with your servers?
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Farhan Anwar @anwarsolutions.bsky.social · 08/03/2025
Yeah because foodborne illnesses aren't ever a problem 🙄
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Farhan Anwar @anwarsolutions.bsky.social · 07/03/2025
For those in #Tucson, there will be a @standupforscience.bsky.social Rally at the U of A today
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Farhan Anwar @anwarsolutions.bsky.social · 02/03/2025
What fun thing happened in your community today? We went to a pet parade
Beginning of the parade, flag bearers at the front followed by the Tucson High Marching Band Mobility is a Journey, dogs with mobility enhancements The Therapeutic Ranch for Animals and Kids (TRAK) with their mini horses Wilbur and Wilma Wildcat with the UA Pomline
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Farhan Anwar @anwarsolutions.bsky.social · 26/02/2025
Hooray...
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Reposted by Farhan Anwar
Better Things Are Possible @internethippo.bsky.social · 26/02/2025
Everyone puts things like "Loving husband and father" on their gravestone. What a sad way to sum up an entire life. What about "Hard working employee"
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Alex Sundermann, DrPH @sundermannaj.bsky.social · 24/02/2025
Some FDA employees fired last week are already being rehired Includes 12 from surgical/infection control devices 🏥 These folks review tools that keep hospitals safe A messy, chaotic process with real #PublicHealth impact Article by @lizzylawrence.bsky.social www.statnews.com/2025/02/23/f...
statnews.com
Trump administration rehires some FDA employees it fired
The Trump administration has started quietly rehiring some FDA employees just days after it fired them.
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Farhan Anwar @anwarsolutions.bsky.social · 24/02/2025
Law & Order doesn't seem as poignant these days...
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JAMA @jama.com · 20/02/2025
In a new Editorial, JAMA editors, JAMA Network Editors in Chief, and JAMA editorial leadership address the recent executive orders that have impacted the scientific process and reaffirm their commitment to scientific and editorial integrity. ja.ma/4b5LsIt
Image shows the JAMA brand logo with the quote, "The silencing of this scientific discourse directly threatens the professional oaths that many have taken." Below the quote, the text shows: "JAMA editors, JAMA Network Editors in Chief, and JAMA editorial leadership."
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Farhan Anwar @anwarsolutions.bsky.social · 20/02/2025
Sounds like a "spirit of the law" argument. This will be challenged I hope
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Farhan Anwar @anwarsolutions.bsky.social · 17/02/2025
👀
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Reposted by Farhan Anwar
TRAstonDrs @castltrastondrs.medsky.network · 16/02/2025
Google is so powerful that it "hides" other search systems from us. We just don't know the existence of most of them. Meanwhile, there are still a huge number of excellent searchers in the world who specialize in books, science, other smart information.
Library of the world
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Farhan Anwar @anwarsolutions.bsky.social · 17/02/2025
Last day of the #TucsonGemShow. Dioptases are quickly becoming a favorite of mine.
Dioptase from the Kennedy CollectionDioptase 3
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Reposted by Farhan Anwar
Robert Reich @rbreich.bsky.social · 11/02/2025
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Farhan Anwar @anwarsolutions.bsky.social · 11/02/2025
Look who's here 👀 @petebuttigieg.bsky.social
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Farhan Anwar @anwarsolutions.bsky.social · 08/02/2025
So what does a 15% indirect mean for grad student stipends, RA-ships, postdoctoral pay? #academicsky
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Ilan Schwartz @germhuntermd.bsky.social · 07/02/2025
I am deeply disappointed by the subdued response of the Infectious Diseases Society of America (@idsainfo.bsky.social) to the dismantling of public health structures, both in the US & globally Here's what I wrote in the closed listserv (response: 🦗) in hopes of stimulating discussion here #IDSky
Unfortunately and unsurprisingly, the administration continues to charge ahead, running roughshod over norms, laws, and the dignity of and most basic protections for the people most vulnerable to infections. Many of the changes are summarized here, up to date as of Feb 4. Who will speak up, or better still, ACT UP for these individuals?

The National Science Foundation has reportedly shared with program officers a list of forbidden "DEI"-related words that will result in grants being flagged. These include routinely used terms like "female", "biased", "systemic", "inclusion" and "exclusion" along with other words that specifically target vulnerable populations. While few clinical researchers rely on NSF grants, it can be reasonably expected that similar censorship with grants from NIH, CDC, etc is inevitable.
USAID funding remains frozen, and in fact there are reports of efforts underway to eliminate the entire agency. The effects have already been devastating for programs dedicated to controlling TB, malaria, and HIV, among others. Despite claims that these would be exempt, distribution of antiretrovirals remains frozen.
The Senate Finance committee advanced RFK Jr for confirmation as HHS Secretary. Kennedy's disdain for evidence-based medicine is no secret. He is a conspiracy theorist who engages in dangerous race-based pseudoscience. The IDSA has fallen short of other professional societies (e.g. the American Public Health Association, which represents 25,000 public health professionals) in calling for the outright rejection of RFK Jr's nomination.
The CDC and NIH remain muzzled, unable to communicate with interstate or international agencies or the public. They have been instructed to recall submitted or accepted manuscripts to scrub objectionable language. They remain barred from traveling until at least the end of April. How will these actions affect our ability to detect and respond to infectious disease outbreaks? Meanwhile, our members are experiencing significant moral injury, and some have expressed levels of morale that rival the nadirs felt during the worst of COVID19. Every day it is a new insult, the cumulative effect being the disassembly of public health protections and further marginalization of the most vulnerable in society. 

Reticence to call attention to ourselves, potentially putting our work in the administration's cross hairs, is entirely understandable. After all, we don't want to imperil existing and ongoing advocacy efforts, including those related to bolstering the ID workforce. A sober analysis would concede that the likelihood of any potential actions moving the needle on any of these issues is low. I would argue, however, that standing up for what is right is the most important thing we can do to reinforce our commitment to social justice and to our members and the patients in our care. 

What we can do and how we can do it is up for debate; some bold ideas have already been presented in the IDea exchange forum and I welcome further input from colleagues. What is certain is that as rank-and-file individuals, our voices can easily be dismissed, but as a trusted, bipartisan professional organization that represents >13,000 infectious diseases experts, we cannot be ignored, and we must not allow ourselves to cower in silence. The reality is that things are going to get worse, and standing up to the assault on public health will only get more difficult as the administration becomes further emboldened and the actions set in motion gather steam. 

In the words of John Lewis, "If not us, then who? If not now, then when?"
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Farhan Anwar @anwarsolutions.bsky.social · 07/02/2025
Wouldn't be a #TucsonGemShow if you didn't see one of these
Gemstone/Mineral cactus
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Farhan Anwar @anwarsolutions.bsky.social · 07/02/2025
What's everyone's #eggprices at? Here's mine:
Egg are at the "low price" of $8.99 per dozen
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Farhan Anwar @anwarsolutions.bsky.social · 04/02/2025
Supposedly leaked by an NSF program officer. Banned words and decision tree guidance. Ugh. #science #idsky
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Farhan Anwar @anwarsolutions.bsky.social · 02/02/2025
Another day, another gem show. This year, cavansite seems to be popular. #TucsonGemShow
Whiten matrix with blue cavansite nodules
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Farhan Anwar @anwarsolutions.bsky.social · 01/02/2025
Cool finds at the Mineral & Fossil Marketplace Show #TucsonGemShow
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Reposted by Farhan Anwar
Seattle Minerals @seattleminerals.bsky.social · 30/01/2025
I’ll be sharing some of my favorite minerals I’ve seen here in Tucson, starting with this stunning etched aquamarine specimen. #aquamarine #minerals #crystals #crystalcollector #geology #tucsongemshow
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Farhan Anwar @anwarsolutions.bsky.social · 01/02/2025
For anyone who needs and wants them #idsky
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Farhan Anwar @anwarsolutions.bsky.social · 01/02/2025
Swell.
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Farhan Anwar @anwarsolutions.bsky.social · 01/02/2025
What's the likelihood of these data, and others being scrubbed, being recovered? Anyone got this data archived? #science #idsky
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Dr. Maya @drdrmaya.bsky.social · 31/01/2025
PLEASE SHARE WIDELY #medsky #IDsky #obgynsky #pedsky CDC STI treatment guidelines have been taken down. They are archived here 👇 web.archive.org/web/20250131...
web.archive.org
Site Index
STIs are common. Many are curable - all are preventable.
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George Takei @georgetakei.bsky.social · 31/01/2025
This is what the government did with 120K+ Japanese Americans in 1942. I know. I was there in those camps.
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Josh Barocas, MD ⭕️ @jabarocas.bsky.social · 31/01/2025
If you haven’t ended your Amazon subscription and invested those savings in @rollingstone.com you’re missing great, honest reporting…
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Farhan Anwar @anwarsolutions.bsky.social · 30/01/2025
Every experiment:
media.tenor.com
a man with long hair and a beard looks angry
ALT: a man with long hair and a beard looks angry
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Farhan Anwar @anwarsolutions.bsky.social · 29/01/2025
It's like it was created to serve a purpose or something...
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Farhan Anwar @anwarsolutions.bsky.social · 28/01/2025
The data may...
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Celeste Ng @pronounced-ing.bsky.social · 28/01/2025
I'll add, for anyone (like me) with social anxiety, esp. around the phone: they don't argue with you! They listen and record your comment. If they agree they will probably reassure you! If they don't, they just log you and you hang up. That's it. We can do this. ❤️👊
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