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Yann Guiguen

@yannguiguen.bsky.social
627 followers 876 following 21 posts

Fish genome and sex determination evolution (genomes, sex chromosomes and sex determining genes). Fond of neotropical 🍍🦜🌴🌺 fishes 🐠🐠🐠 especially Characiforms | INRAE | LPGP | Rennes | France |

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Ana Santacruz @anasaruz.bsky.social · 17/09/2025
Back from the Cavefish Retreat — amazing people, gorgeous location, great science, and a strong community! 🐟✨ The future looks bright for the #cavefish field!
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Trends in Ecology & Evolution @cp-trendsecolevo.bsky.social · 18/07/2025
Online now: Recombination-aware phylogenomics
dlvr.it
Recombination-aware phylogenomics
Phylogenetic variation, recombination rate evolution, and comparative genome structure and organization have typically been explored in isolation. The chromosomal and genomic context of selected genetic markers in phylogenetic studies is usually unknown, given the fragmented nature of most genome assemblies. It is now established that the position of markers in the genome can strongly influence the inferred phylogeny, often not reflecting speciation patterns and subsequent bifurcating tree structure but rather post-speciation introgression. The recent availability of chromosome-level genome assemblies and advances in estimating genome-wide recombination rates have created opportunities to jointly understand the interplay of chromosome evolution, the landscape of recombination, and phylogenetic signal.
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Jie Wang @jiewang07.bsky.social · 21/07/2025
I’m currently presenting my poster at #SMBE2025 Poster ID: S2-P05 Topic: Sex chromosome evolution in Australian burrowing frogs Neobatrachus 🐸 Would love to discuss with anyone interested, come by if you’re around! @stevedonnellan.bsky.social , Scott Edwards suggested I send you our photo together 😊
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Petr Nguyen @petrnguyen.bsky.social · 24/07/2025
Excited to share our new paper in #MolEcol on sex chromosome evolution in African killifish! 🐟 A great collaboration with @alexandrsember.bsky.social . We uncovered ≥4 sex chromosome turnovers across Nothobranchius spp. using cytogenetics & genomics. 👉 onlinelibrary.wiley.com/doi/10.1111/...
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IRB Barcelona @irbbarcelona.org · 18/08/2025
🧬 Today starts the most relevant event in evolutionary biology: the European Society for Evolutionary Biology (ESEB) Congress (@eseb2025.bsky.social @eseb.bsky.social). 🔝 #IRBBarcelona's group leader @tonigabaldon.bsky.social is the chair of this major event that will gather +1900 participants. 👇
ccib.es
The CCIB will welcome over 1,900 scientists to explore the origin and evolution of life - CCIB
Barcelona to host the Leading Event in Evolutionary Biology ESEB 2025
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Stu West @stuwest.bsky.social · 22/08/2025
Mike Ritchie emphasising the huge importance of supporting society journals like JEB in his ESEB presidential address, Barcelona. @eseb.bsky.social @eseb2025.bsky.social
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Steve Ramm @steveramm.bsky.social · 22/08/2025
This is a big innovation for #eseb2027 not without it's challenges (time zones, currencies, technical delays...) but with potentially HUGE savings in terms of carbon footprint. So well done @eseb.bsky.social, let's embrace the experiment and make the hub concept a success! #eseb2025
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Thomas Desvignes @notothentoma.bsky.social · 25/08/2025
Few months ago I commissioned artist @hidet0shi.bsky.social a drawing of the Antarctic dragonfish we described last year, with if possible both the fish and the RV Laurence M Gould as the fish was named after the ship: Akarotaxis gouldae! It turned out so beautiful I made stickers out it! 🧪🌎🐟🧊🇦🇶
A sticker with represented the recently described Antarctic dragonfish Akarotaxis gouldae and in the background the research vessel Laurence M Gould
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Zebrafish Rock! 🎃 @zebrafishrock.bsky.social · 16/05/2025
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Clémence Fraslin @clemencefraslin.bsky.social · 08/05/2025
It was a pleasure to collaborate again with Florence and the Guppie group from @umr-gabi.bsky.social in France where I did my Phd and a postdoc, and with @yannguiguen.bsky.social from Rennes who was a partner in the first project as well (NeoBio) Hope you enjoy reading the paper
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Yann Guiguen @yannguiguen.bsky.social · 23/03/2025
End of my field trip in French Guiana. Too bad 😩. Sampling for a genome project (AtlasG2P) and a sex chromosome evolution project (CharaSex) on Characoidei fishes 🐟🐠.
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Dr. Solomon David @solomonrdavid.bsky.social · 14/02/2025
“Love at first bite?” Deep-sea anglerfish female (right) and parasitic male (left)
Two preserved deep-sea anglerfish are held in the palm of a person’s hand. The male is on the left and much smaller, less-developed (in appearance) compared to the larger female anglerfish on the right.
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David Shiffman, Ph.D. 🦈 @whysharksmatter.bsky.social · 16/02/2025
Anemonefish use sialic acid metabolism as Trojan horse to avoid giant sea anemone stinging | BMC Biology | Full Text
buff.ly
Anemonefish use sialic acid metabolism as Trojan horse to avoid giant sea anemone stinging - BMC Biology
Background Anemonefish association with sea anemones is a prime example of mutualistic symbiosis. These fish live inside the sea anemone, benefitting from the protection of its toxic nematocysts, and…
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ATLASea @atlasea.bsky.social · 22/11/2024
🎥 Plongez au cœur de la science avec “Les pêcheurs d’ADN” ! Découvrez comment l’équipe d’ATLASea a prélevé les échantillons des espèces marines lors de la mission à Dinard de cet été pour révéler la biodiversité cachée des océans. 🌊🔬 ➡️ À voir ici : lejournal.cnrs.fr/videos/les-p...
lejournal.cnrs.fr
Les pêcheurs d’ADN
Séquencer le génome de 4 500 espèces marines, c’est l’objectif du programme de recherche ATLASea dont la première expédition a eu lieu à Dinard, en Bretagne. Pendant huit ans, les scientifiques vont c...
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Madison Earhart, PhD @madisonearhart.bsky.social · 20/11/2024
soo excited to share my latest paper & illustration~ a sturgeon meta analysis evaluating thermal tolerance where we asked can sturgeon handle climate warming? Unfortunately we found that physiological impacts across life stages limits ecological success 🧪👩🏻‍🔬🐠🌎🐡 onlinelibrary.wiley.com/doi/10.1111/...
This illustration depicts north america colored te to burnt orange, highlighting temperature differences across the continent. The 8 north american sturgeon species ring the outside of the map. Each sturgeon species is underlaid by a color which corresponds with dots on the map.  The dots on the map show where thermal tolerance studies were completed, and the size of the dot corresponds to how many studies were completed in that area. Illustration by Madison Earhart.
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Tony Gamble @tonygamble.eurosky.social · 10/06/2024
This short graphic novel about Fish Sex Determination from Sophia Breslin, John Postlethwait, & Thomas Desvignes @notothentoma.bsky.social is AMAZING! blogs.uoregon.edu/fishsexdeter... 🧪🐠🧬
An illustration of some cartoon fish and their varying sex-determining genes (SDGs). Header test says, "Strangely, fish have a variety of different SDGs rather than a single gene, like in all mammals or in all birds." The text on the bottom right continues, "But sometimes, even closely related fish have different SDGs like these three ricefishes." 
The illustrated fish species and their associated sex-determining genes (SDMs) include: Striped catfish & amhr2; Northern pike & amh; Herring & bmpr1b; rainbow trout & irf9; Mexican blind cavefish & gdf6; Greater amberjack & hsd17b1; Senegalese sole & fshr; Japanese ricefish & dmy; Luzon ricefish & gsdf; and Indian ricefish & sox3.
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MU-Peter Shimon 🀄 @mu-peter.bsky.social · 18/11/2024
The time has come... Share to Bluesky 🏺🧪
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Thomas Hitchcock @imprintedgene.bsky.social · 22/11/2023
Our new paper on sexual antagonism in sequential hermaphrodites has now been published! royalsocietypublishing.org/doi/full/10....
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Robson Peisley @robsonpeisley.bsky.social · 18/11/2024
I have been conducting my dissertation fieldwork in the #ponds at the wonderful Seven Sisters Country Park, UK. Part of the #SouthDownsNationalPark, we found lots of #freshwater inverts (including this incredible #soldierfly larvae), newt efts, and even some #fish (stickleback sp.) in one pond 🪲
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Andy Hickl @andyhickl.bsky.social · 16/11/2024
No surprise: AI in genome studies is running into problems like biases and false positives, often due to incomplete or unbalanced datasets. So, what can be done? 🧪🧵 www.the-scientist.com/ai-assisted-...
the-scientist.com
AI-Assisted Genome Studies Are Riddled with Errors
Researchers used artificial intelligence in large genomics studies to fill in gaps in patient information and improve predictions, but new research uncovers false positives and misleading correlations...
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ATLASea @atlasea.bsky.social · 15/11/2024
Discover #ATLASea, a #France2030 research programme to build an atlas of marine genomes. First step, sampling marines species #DIVE-Sea, then sequencing their genomes #SEQ-Sea and managing all the data #BYTE-Sea. EN : youtu.be/3Sg9o_8Uk6M FR: www.youtube.com/watch?v=sl9o...
youtu.be
ATLASea research programme: an atlas of marine genomes
YouTube video by ATLASea
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bioRxivpreprint @biorxivpreprint.bsky.social · 02/06/2024
B chromosome and its non-Mendelian inheritance in Atractylodes lancea www.biorxiv.org/content/10.1101/202…
biorxiv.org
B chromosome and its non-Mendelian inheritance in Atractylodes lancea https://www.biorxiv.org/content/10.1101/2024.05.27.595828v1
Supernumerary B chromosomes contribute to intraspecific karyotypic variation. B chromosomes have bee
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Prosanta Chakrabarty @prosanta.bsky.social · 12/11/2024
Helped name an asteroid ‘Cavefish’ to honor and raise awareness about the 200 or so species of small, eyeless and usually pigmentless subterranean fishes www.lsu.edu/science/bios...
lsu.edu
Newly Named "Cavefish" Asteroid Honors Hidden Creatures Swimming in the Depths of Earth
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bioRxiv Evolutionary Biology @biorxiv-evobio.bsky.social · 11/11/2024
Evolutionary history of the grape sex-determining region in angiosperms and emergence of dioecy in Vitaceae www.biorxiv.org/content/10.1101/202…
biorxiv.org
Evolutionary history of the grape sex-determining region in angiosperms and emergence of dioecy in Vitaceae https://www.biorxiv.org/content/10.1101/2024.11.10.622717v1
Dioecy, defined by the presence of either female or male flowers on separate individual plants, is r
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Michi Tobler @tobler.bsky.social · 06/07/2024
As I’m gearing up for another week in the field, I’m still digesting our recent visit to Mexico. So many good memories with a great team. But seeing the same sites for 20 years, there was also a brutal reality of a changing climate and human activities encroaching on the last bits of wilderness…
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Yann Guiguen @yannguiguen.bsky.social · 28/06/2024
Last day of the EuroEvo2024 meeting. Such a wonderful one. Thanks to the organizers for making it so nice, friendly and scientifically exciting
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Zebrafish Rock! 🎃 @zebrafishrock.bsky.social · 14/06/2024
“Genome-wide comparisons of derived character states revealed that danio relationships are inconsistent with a simple bifurcating species history and support an ancient hybrid origin of the D. rerio lineage.” 🔥 take from John Postlethwait
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Yann Guiguen @yannguiguen.bsky.social · 09/06/2024
Animation at Palais de la Porte Dorée aquarium
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STCmicrobeblog @stcmicrobeblog.bsky.social · 29/05/2024
on 𝕏: @PLOSBiology The #phylogenetic tree has been a core conceptual tool for #EvolutionaryBiology for nearly 200 years. @RoliRoberts explores the role of the tree as a metaphor, discussing two new #PLOSBiology Essays that look to the future plos.io/3VjDSU8
plos.io
Trees as a metaphor to understand relationships in biology
The phylogenetic tree has been a core conceptual tool for evolutionary biology for nearly 200 years. This editorial explores the role of the tree as a metaphor, discussing two new PLOS Biology Essays ...
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Yann Guiguen @yannguiguen.bsky.social · 31/03/2024
Sampling in the jungle 🐠😋
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Yann Guiguen @yannguiguen.bsky.social · 31/03/2024
Tomeurus gracilis (Poecilidae)
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Yann Guiguen @yannguiguen.bsky.social · 31/03/2024
Field sampling in French Guiana Hoplias malabaricus
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Molly Schumer @mollyschumer.bsky.social · 10/01/2024
So glad our paper on lethal hybrid incompatibilities is out at Nature today: rdcu.be/dvFcM ! @ben-moran.bsky.social moved mountains for this project: we identified two new incompatibilities in swordtail hybrids , characterize mechanisms of lethality, and their evolutionary history.
rdcu.be
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Yann Guiguen @yannguiguen.bsky.social · 10/02/2024
A short bio introduction for my new social media life on Bluesky
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Irene Cantone @cantoneirene.bsky.social · 11/11/2023
A #milestone paper: the #female #sex determination gene discovered! Three aminoacid change in #WT1 shut down Sry and determine development of #ovaries. www.science.org/doi/10.1126/... @ScienceMagazine
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The Interactive Fly @interactivefly.bsky.social · 29/12/2023
Perrotta, M. M., Lucibelli, F., Mazzucchiello, S. M., ..., Vitagliano, L., Aceto, S. and Saccone, G. (2023). Female Sex Determination Factors in Ceratitis capitata: Molecular and Structural Basis of TRA and TRA2 Recognition. Insects 14(7). www.mdpi.com/2075-4450/14...
mdpi.com
Female Sex Determination Factors in Ceratitis capitata: Molecular and Structural Basis of TRA and TR...
In the model system for genetics, Drosophila melanogaster, sexual differentiation and male courtship behavior are controlled by sex-specific splicing of doublesex (dsx) and fruitless (fru). In vitro a...
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Ben @beeeencox.bsky.social · 10/01/2024
Some animals use ZW chromosomes instead of XY for sex determination, so ZZ Top is already all male!! (for birds at least)
Graphic depicting ZW/ZZ chromosome sex determination in birds. Offspring inherit a Z from the male parent and either a W or Z from the female parent.  ZZ is male and ZW is female.
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bioRxiv Evolutionary Biology @biorxiv-evobio.bsky.social · 09/02/2024
Consequences of Cancer on Zebrafish Danio rerio: Insights into Sex Determination, Sex Ratio, and Offspring Survival. www.biorxiv.org/content/10.1101/202…
biorxiv.org
Consequences of Cancer on Zebrafish Danio rerio: Insights into Sex Determination, Sex Ratio, and Offspring Survival. https://www.biorxiv.org/content/10.1101/2024.02.08.579516v1
Offspring sex ratio has been proposed as an indicator of the risk of developing certain cancers in h
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Andrew Mongue @ajmongue.bsky.social · 21/12/2023
I've got a new preprint out analyzing Z sex chromosome evolution in something other than a bird or butterfly for the first time! Have a look at what I unofficially call "faster Z under the sea"!
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bioRxiv Evolutionary Biology @biorxiv-evobio.bsky.social · 28/12/2023
Sex chromosome dominance in a UV sexual system www.biorxiv.org/content/10.1101/202…
biorxiv.org
Sex chromosome dominance in a UV sexual system https://www.biorxiv.org/content/10.1101/2023.12.28.573518v1
The alternation between multicellular haploid gametophytes and diploid sporophytes is a defining fea
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