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Verena Kutschera

@vekutschera.bsky.social
255 followers 343 following 7 posts

Bioinformatician at National Bioinformatics Infrastructure Sweden (NBIS / ELIXIR-SE) and SciLifeLab | interested in evolution, biodiversity, conservation and population genomics, pipeline development, reproducible research | Stockholm, Sweden

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Reposted by Verena Kutschera
Nicolas Dussex @nicolasdussex.bsky.social · 31/07/2026
2-years Postdoc in Aquatic Ecosystem Resilience and Climate Adaptation at #SLUAqua with @orjost.bsky.social and in collaboration with NRM Stockholm. #ecoevo #EvolBiol Using systematic reviews, meta-analyses & other synthesis methods to address the following questions 🧵 www.slu.se/en/about-slu...
slu.se
Postdoctoral position in Aquatic Ecosystem Resilience and Climate Adaptation | slu.se
SLU - Science and Education for Sustainable Life
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Reposted by Verena Kutschera
NBIS @nbis.se · 29/06/2026
NBIS is at #SMBE2026 🧬 Come talk to us and have a look at our poster in the Arlequin room!
Verena and André posing by our NBIS poster.
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Verena Kutschera @vekutschera.bsky.social · 18/05/2026
GenErode version 0.7.0 with the option to provide processed BAM files as input is available! 🎉 github.com/NBISweden/Ge...
github.com
GitHub - NBISweden/GenErode: GitHub repository for GenErode, a Snakemake workflow for the analysis of whole-genome sequencing data from historical and modern samples to study patterns of genome erosio...
GitHub repository for GenErode, a Snakemake workflow for the analysis of whole-genome sequencing data from historical and modern samples to study patterns of genome erosion. - NBISweden/GenErode
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Reposted by Verena Kutschera
ERGA - European Reference Genome Atlas @ergabiodiv.bsky.social · 12/05/2026
EᖇGᗩ ᑕOᗰᗰᑌᑎITY GEᑎOᗰEՏ 🔵 Working on a genome of a European species? 🟣 Not part of a project like BGE, ATLASea, or DToL? 🟢 ERGA Community Genomes is your solution!
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Reposted by Verena Kutschera
The Oxford Nature Network @biodivoxford.bsky.social · 12/05/2026
How should we be designing conservation science for decision making? Join Leah Gerber for her talk on May 22nd, in person or online - registration here: bookwhen.com/oxfordbiodiv... @ecioxford.bsky.social
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Reposted by Verena Kutschera
ICP2026 Stockholm @palaeogenomics.bsky.social · 27/05/2025
The FIRST International Conference on Palaeogenomics will happen in Stockholm, Sweden, June 23-26, 2026! Topics will encompass all corners of ancient DNA research, from humans to wildlife and sediments🧬🦣💀🦠 Save the dates ✅ Check the website icp2026.palaeogenomics.org and follow us for updates!
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Verena Kutschera @vekutschera.bsky.social · 13/05/2025
The next GenErode version is available (0.6.3)! 🎉 github.com/NBISweden/Ge...
github.com
GitHub - NBISweden/GenErode at 0.6.3
GitHub repository for GenErode, a Snakemake pipeline for the analysis of whole-genome sequencing data from historical and modern samples to study patterns of genome erosion. - GitHub - NBISweden/Ge...
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Reposted by Verena Kutschera
Prof Katherine Schofield 🇬🇧🇦🇺🇪🇺 @katherineschof8.bsky.social · 07/05/2025
My colleague, investigating a student for obvious GenAI use, sent me a bibliographical reference to a chapter I'd apparently written in a volume I had apparently edited. Neither title of course exists. But they were both titles I COULD have written, and he emailed because he felt he had to check.
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ERGA - European Reference Genome Atlas @ergabiodiv.bsky.social · 07/05/2025
#ERGAReads | How much media attention does #biodiversity get? 📉 Not nearly enough. This study compares media & search interest in #COP15 vs #COP27 and... Taylor Swift 🎤🌍 Bridging this attention gap is crucial to achieving global #conservation goals. 🔗 rdcu.be/eiJ0A
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Verena Kutschera @vekutschera.bsky.social · 24/04/2025
Even though biodiversity loss is happening at an alarming rate, COP15 received significantly less media coverage and internet search interest than COP27 and Taylor Swift according to this study. www.nature.com/articles/s44...
nature.com
Media coverage of biodiversity falls short compared to climate change and popular culture - npj Biodiversity
We compared global media coverage and internet search interest in COP15—which resulted in the Kunming-Montreal Global Biodiversity Framework—with COP27, a climate-focused conference, and the popular A...
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Reposted by Verena Kutschera
Judith Mank @judithmank.bsky.social · 12/04/2025
We are looking for new manager for our computing unit! If you have experience in both biology and computers, this might be the perfect job for you! UBC is a lovely place, and Zoology is a fantastic, collaborative and kind department. Apply by May 4th at ubc.wd10.myworkdayjobs.com/ubcstaffjobs...
ubc.wd10.myworkdayjobs.com
Biosciences Computing Manager
Staff - Non Union Job Category M&P - AAPS Job Profile AAPS Salaried - Information Systems and Technology, Level D Job Title Biosciences Computing Manager Department Administrative Leadership | Dep...
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José Cerca @naturalselection.bsky.social · 14/04/2025
[Please share] 📢‼️ I have 2️⃣ postdoc positions advertised at the Swedish Museum of Natural History: Postdoc on "Theory of adaptive radiation" recruit.visma.com/spa/public/a... Postdoc on "Homoploid Hybrid Plant Genome Evolution" recruit.visma.com/spa/public/a...
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Anna Brüniche-Olsen @annabruniche.bsky.social · 23/04/2025
Phylogeography of introgression: Spatial and temporal analyses identify two introgression events between brown and American black bears 🐻🧬 www.nature.com/articles/s41...
nature.com
Phylogeography of introgression: Spatial and temporal analyses identify two introgression events between brown and American black bears - Heredity
Heredity - Phylogeography of introgression: Spatial and temporal analyses identify two introgression events between brown and American black bears
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Reposted by Verena Kutschera
Rike Stelkens @stelkens.bsky.social · 23/04/2025
Only 1 more week to apply for this postdoc position on the genomics of parallel climate adaptation in yeast! Link to application portal is in the post below. Please share widely! 🧪🌳🧬🍄
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Reposted by Verena Kutschera
ERGA - European Reference Genome Atlas @ergabiodiv.bsky.social · 23/04/2025
🔔 #Seminar: Genomic erosion and biodiversity #conservation 🗓️ Tue, April 29 - 11:00 CEST 🔗 www.erga-biodiversity.eu/post/genomic... Talks by @hernmoral.bsky.social, Samuel Speak and Xuejing Wang from the Globe Institute and @earlhaminst.bsky.social @ebpgenome.bsky.social @biogeneurope.bsky.social
erga-biodiversity.eu
Genomic erosion and biodiversity conservation
This month's ERGA BioGenome Analysis & Applications Seminar will feature three short talks on the topic of genomic erosion and biodiversity conservation. Learn more below about the featured talks and ...
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Natural History Museum, London @nhm-london.bsky.social · 03/04/2025
Spring has finally sprung, and you may have noticed a few more bees about! 🐝 We’ve got 5 handy tips on making your garden the best it can be for the bees 👇
A bumblebee in flight approaches a bright pink flower hanging down from a bush.
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Tanja Slotte @tanjaslotte.bsky.social · 01/04/2025
We have an open 4-year PhD position in the Slotte lab at Stockholm University, to investigate genomic signatures of selection associated with pollination mode shifts. Full ad: su.varbi.com/en/what:job/... Apply by April 22, 2025 via the University application portal (link). Please repost! 🧪
su.varbi.com
PhD student in Ecology and Evolution
The Department of Ecology, Environment and Plant Sciences (DEEP) is located in the Arrhenius Laboratories, situated at the University Campus at Frescati. Presently around 100 people, including 35 PhD
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Reposted by Verena Kutschera
Deutsche Umwelthilfe @umwelthilfe.bsky.social · 02/04/2025
Der Klimabericht des Deutschen Wetterdiensts bestätigt, was unser #Hitze-Check 2024 auch gezeigt hat: Viele Städte sind an Sommertagen kaum noch lebenswert. Auf zubetonierten Plätzen und Straßen sucht man vergebens ein Schattenplätzchen. (1/2)
spiegel.de
(S+) Bericht des DWD: So hart trifft Deutschland die Klimakrise
Hitzewellen, sehr nasse oder trockene Jahre: Was früher extrem war, ist heute normal, schreibt der DWD in seinem Klimabericht für 2024. Er warnt vor den Folgen für die deutsche Energieversorgung.
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ERGA - European Reference Genome Atlas @ergabiodiv.bsky.social · 02/04/2025
#ERGAReads | Integrating #GeneticDiversity into #NatureRestoration: this review highlights how genetic diversity -often overlooked in conservation policies- can strengthen the EU’s Nature Restoration Regulation and global #biodiversity efforts. 🔗 doi.org/10.1016/j.bi... @coalitioncongen.bsky.social
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Carl T. Bergstrom @carlbergstrom.com · 01/04/2025
Trump's 3/27 executive order targets the Smithsonian for advancing "the view that race is not a biological reality but a social construct." Trump argues that the exhibit's statement, below, is unscientific. He's wrong. As a biology professor and population geneticist, I agree with every word of it.
“Race does not provide an accurate representation of human biological variation,” the statement reads. “Humans are not divided biologically into distinct continental types or racial genetic clusters. Instead, the Western concept of race must be understood as a classification system that emerged from, and in support of, European colonialism, oppression, and discrimination.”

“It thus does not have its roots in biological reality, but in policies of discrimination,” the statement says. “Because of that, over the last five centuries, race has become a social reality that structures societies and how we experience the world. In this regard, race is real, as is racism, and both have real biological consequences.”
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Nonia Pariente @npariente.bsky.social · 31/03/2025
Looking forward to this webinar with @scilifelab.se on navigating open science policies. I will speak about open science practices at scientific journals. There’s still time to sign up - come join us! www.scilifelab.se/event/plos-a...
scilifelab.se
PLOS and SciLifeLab Webinar: Navigating Open Science Policies – Practical Guidance for Researchers on Sharing Data and Software
Open science policies are rapidly evolving, but many researchers find them to be vague and difficult to navigate. These policies often lack clear, actionable guidelines for how researchers can respond...
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Reposted by Verena Kutschera
ERGA - European Reference Genome Atlas @ergabiodiv.bsky.social · 01/04/2025
Did you know that you can build pipelines in @galaxyproject.bsky.social? Check out this talk by Björn Grüning, head of the Galaxy Team @uni-freiburg.de, and discover how #Galaxy how to get started with the platform and create pipelines right away! 🔗 youtu.be/OIzWTd93k5c?... #usegalaxy #genomics
youtu.be
How to build a pipeline in Galaxy?
YouTube video by ERGA - European Reference Genome Atlas
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IPBES @ipbes.net · 01/04/2025
Looking for high quality free videos?🎥 Introducing: Open Planet! 🧪🌍 A rich free-to-use video library to help storytellers create impactful content for our planet. Find world-class footage to tell your stories about #biodiversity & nature ⤵️🌿 openplanet.org #ForNature
openplanet.org
Discover world-class footage of our changing planet.
Open Planet is a global library of high-quality climate and nature footage. It is free to use for educational, environmental and impact storytelling.
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Bund für Umwelt und Naturschutz Deutschland e.V. @bund.net · 01/04/2025
„Ohne die Möglichkeit zur Klage wird die Zerstörung von Flüssen, Seen u. Landschaften immer weiter zunehmen“. Klartext von @bandt-bund.bsky.social bzgl. der Diskussion von CDU u. SPD, das #Klagerecht für Umweltverbände einzuschränken. #Koalitionsverhandlungen
taz.de
Stand der Koalitionsverhandlungen: Bechsteinfledermaus bald kein Grund mehr zur Klage?
Union und SPD diskutieren, das Klagerecht für Umweltverbände einzuschränken. Höchst fraglich, ob das machbar ist. Kritik gibt es dennoch reichlich.
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ELIXIR Europe @elixir-europe.org · 25/03/2025
Do you have a #bioinformatics project idea that needs a little stimulus⚡? Submit your project proposal for #BioHackEU25 to get the chance to meet with experts 💨 to drive the project forward. 📥 Submit your proposal by 14 April: biohackathon-europe.org/projects/
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Gabriel Renaud @gabrielylr.bsky.social · 25/03/2025
aDNA/aeDNA folks: tired of eyeballing hundreds of damage plots? I am excited to introduce AdDeam—a tool to rapidly generate damage profiles, cluster them, and spot outliers. Great for large sample sets or flagging modern contigs in ancient metagenomics assemblies. www.biorxiv.org/content/10.1...
biorxiv.org
AdDeam: A Fast and Scalable Tool for Estimating and Clustering Reference-Level Damage Profiles
Motivation DNA damage patterns, such as increased frequencies of C>T and G>A substitutions at fragment ends, are widely used in ancient DNA studies to assess authenticity and detect contamination. In ...
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Torsten Günther @trstngnthr.bsky.social · 25/03/2025
Last week, @elife.bsky.social posted the version of record of our #aDNA study on Iberian aurochs/cattle. We found a lot of hybridization, probably sex-biased, stabilizing at ~20% about 4000 years ago (co-author Colin Smith coined the term 'cowrochs'). Read more: elifesciences.org/articles/93076
elifesciences.org
The genomic legacy of aurochs hybridisation in ancient and modern Iberian cattle
After their introduction to the Iberian peninsula, domestic cattle hybridised with mostly male wild aurochs for millennia until human actions likely ended this process about 4000 years ago.
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The Oxford Nature Network @biodivoxford.bsky.social · 20/03/2025
Join us online next month, when we'll be asking: What is the role of academia in addressing the biodiversity crisis? Register your place now! bookwhen.com/oxfordbiodiv... @ecioxford.bsky.social @biology.ox.ac.uk
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Verena Kutschera @vekutschera.bsky.social · 20/03/2025
Happy to see my former @nbis.se advisory program student Zach Nolen's new pipeline PopGLen for analyses of short-read data using genotype-likelihood based methods out! Github: github.com/zjnolen/PopG... Paper: academic.oup.com/bioinformati...
academic.oup.com
PopGLen—A Snakemake pipeline for performing population genomic analyses using genotype likelihood-based methods
AbstractSummary. PopGLen is a Snakemake workflow for performing population genomic analyses within a genotype-likelihood framework, integrating steps for r
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Centre for Palaeogenetics @cpgsthlm.bsky.social · 19/03/2025
New paper 🚨 This review led by #CPGstlhm researchers @amandalindahl.bsky.social @indianadiez.bsky.social @lovedalen.bsky.social and @palaeopete.bsky.social explores how #ancientDNA 🧬 can be used to investigate all hierarchical levels of #biodiversity across time ⌚ 👉 www.nature.com/articles/s44...
nature.com
Palaeogenomic inference of biodiversity dynamics across Quaternary timescales - Nature Reviews Biodiversity
This Review explores the utility of palaeogenomics for exploring past biodiversity trends and ecosystem responses to a changing world, including natural climate cycles and increasing human activity.
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Estelle PW 🦊 Bioinfox @estellepw.eurosky.social · 21/01/2025
The NBIS course "Population Genomics in Practice", held 15-19 September in Uppsala, is now open for applications! Join us to learn more about how to handle and analyze population genomic data. Deadline to apply: May 15! www.scilifelab.se/event/popula...
scilifelab.se
Population Genomics in Practice
The “Population Genomics in Practice” course is open for PhD students, postdocs, researchers, and other employees in Swedish universities, who need hands-on and practical skills to analyze population ...
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ERGA - European Reference Genome Atlas @ergabiodiv.bsky.social · 27/02/2025
Meet @iboleurope.bsky.social & #ERGA! 🤝 This edition of #Connections introduces the 2 communities and their different but complementary genomic approaches to studying European #biodiversity 🧬 www.erga-biodiversity.eu/post/meet-ib... @biogeneurope.bsky.social @ebpgenome.bsky.social
erga-biodiversity.eu
Meet iBOL Europe and ERGA
The European Reference Genome Atlas (ERGA) and the European node of the International Barcode of Life (iBOL Europe), two international communities of scientists brought together under the Biodiversity...
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Roy Francis @royfrancis.bsky.social · 23/01/2025
Join us this June in Visby, Sweden 🇸🇪 for RaukR 2025, a 2-week intensive R summer school 👨‍💻👩‍💻 designed to take your R skills 📊 beyond the basics. For more information and to apply, visit our website. nbisweden.github.io/raukr-2025/ #rstats #r #datascience #code #bioinformatics #nbisweden
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The Coalition for Conservation Genetics @coalitioncongen.bsky.social · 18/02/2025
🚨New #policy research! A recent study explores how the #conservation of #GeneticDiversity can be integrated into the EU’s Nature Restoration Regulations & why safeguarding genetic diversity is key to ecosystem resilience🌿 Read more here: www.coalitionforconservationgenetics.org/resources-da...
coalitionforconservationgenetics.org
Genetic diversity is key to restoring nature — Coalition for Conservation Genetics
Find out how genetic diversity can be integrated into the EU’s Nature Restoration Regulations.
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Nature Portfolio @natureportfolio.nature.com · 30/01/2025
Genetic diversity has declined within two-thirds of more than 600 species over the past three decades, according to research published in Nature. The findings highlight the need for conservation efforts to prevent genetic diversity loss. go.nature.com/42EpVo5 🧪
This is figure 1, which shows a summary of the systematic review dataset.
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Alexandra Witze @alexwitze.bsky.social · 07/01/2025
➡️ Science journalism job alert! Nature has a rare opening for a staff reporter, based in Berlin or Sydney. I know the cities are weirdly selective, but this position will join either the news team's European bureau or its Asia-Pacific bureau. Apply by Jan 20: lnkd.in/gCQjc-iE
lnkd.in
Nature Portfolio hiring (Senior) Reporter (m/w/d) in Berlin, Berlin, Germany | LinkedIn
Posted 2:10:43 PM. Job Title: (Senior) Reporter (m/w/d)Locations: Berlin or Syndey – hybrid working model; full time…See this and similar jobs on LinkedIn.
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Julian Schrader @julianschrader.bsky.social · 07/01/2025
Only 8 days left to apply for our fully-funded 4 years #PhD position in island biogeography for plants! Work with Prof Rampal Etienne and me at @unigroningen.bsky.social & Macquarie University in #Sydney. Don’t miss this unique opportunity! Please share widely!
mq.edu.au
Global PhD in island biogeography for plants
This scholarship supports PhD candidates studying ecology and evolutionary biology of plants. Research in Groningen, The Netherlands, and in Sydney, Australia.
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Tanja Slotte @tanjaslotte.bsky.social · 07/01/2025
For students interested in evolution & DNA sequence variation: At Stockholm University we are offering a Masters programme in Evolutionary Genomics from fall 2025. Application deadline soon - Jan 15, 2025! www.su.se/english/sear... #evolution #genomics #masters #HigherEd
su.se
Master’s programme in Evolutionary Genomics - Stockholm University
Digital Course Catalogue of Stockholm University
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Marty Kardos @martykardos.bsky.social · 17/12/2024
Lukas Keller, @fieldgenomics.bsky.social and I asked 'What can genome sequence data reveal about population viability?' Here's what we found: onlinelibrary.wiley.com/doi/epdf/10.... 🧪 #consgen
onlinelibrary.wiley.com
What Can Genome Sequence Data Reveal About Population Viability?
You have to enable JavaScript in your browser's settings in order to use the eReader.
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Verena Kutschera @vekutschera.bsky.social · 18/12/2024
Me and my colleagues had a great time at the @scilifelab.se winter party last night! Here our contribution to the sculpture building contest 🤩
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Diana Fisher @dianafisher1080.bsky.social · 12/12/2024
Stockholm University, Sweden is recruiting up to 3 Assistant Professors in #Biodiversity to tackle the critical global issue of biodiversity loss caused by human-driven factors such as climate change, habitat alteration and pollution www.su.se/english/news... @uq-cbcs.bsky.social @scilifelab.se
su.se
Faculty of Science is recruiting Assistant Professors in Biodiversity - Stockholm University
Faculty of Science is recruiting Assistant Professors in Biodiversity - Stockholm University
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Katerina Guschanski @kguschan.bsky.social · 01/12/2024
If you like genomics, speciation, and primates, this PhD position is for you! Unraveling the genomic architecture of speciation and gene flow in a crazy group of monkeys at U of Edinburgh . Do reach out with questions! evol.mcmaster.ca/brian/evoldi...
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Verena Kutschera @vekutschera.bsky.social · 27/11/2024
Version 0.6.2 of the GenErode pipeline is now available! 🎉 github.com/NBISweden/Ge...
github.com
GitHub - NBISweden/GenErode: GitHub repository for GenErode, a Snakemake pipeline for the analysis of whole-genome sequencing data from historical and modern samples to study patterns of genome erosio...
GitHub repository for GenErode, a Snakemake pipeline for the analysis of whole-genome sequencing data from historical and modern samples to study patterns of genome erosion. - NBISweden/GenErode
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Verena Kutschera @vekutschera.bsky.social · 27/11/2024
Happy to be a teaching assistant at the NBIS/ELIXIR Tools for reproducible research workshop @scilifelab.se in Solna/Sweden! nbisweden.github.io/workshop-rep...
nbisweden.github.io
Home | Tools for Reproducible Research
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