Reposted by TaxonWorksTowards a National Collection (TaNC) @nationalcollection.bsky.social · 28/09/2026We are pleased to announce the launch of the Economic Impact of Collections Loss project, to be delivered by London Economics Ltd. This project aims to address the limited evidence about the economic consequences when collections, collections data or systems become unavailable. tinyurl.com/2fzd8fat 014
Reposted by TaxonWorksGGBN @ggbnoutreach.bsky.social · 28/09/2026CETAF is organising a webinar on how new genomic technologies are transforming the scientific potential of natural history collections. Talks will be given by Prof. Michael Hofreiter and Dr. Carola Greve. 18 November 2026 14-15.30h (CET) Do not forget to register! 003
Reposted by TaxonWorksTorsten Dikow @tdikow.bsky.social · 25/09/2026#TDWG2026 presenting (virtually) this morning (local time in Oslo) on tool for automated transcription of digitized insect specimen labels - using machine learning to extract, transcribe + itemize data into Darwin Core fields - we call it Labellum - slides at @figshare.com doi.org/10.25573/dat... 085
Reposted by TaxonWorkstdwg.org @tdwg.org · 25/09/2026We completed our mission! #TDWG2026 brought together the best minds in Biodiversity, Data Management, Digital Infrastructures and more Thanks #Oslo, 🇳🇴 and thanks to University of Oslo, Natural History Museum and GBIF.no for hosting us Next stop: #LivingData2027 at #Montreal, 🇨🇦 🔗 tdwg.link/2027 251
Reposted by TaxonWorksRod Page @rdmpage.bsky.social · 25/09/2026Summary of user feedback on future interfaces for @biodivlibrary.bsky.social as part of workshop run at @tdwg.org #tdwg2026 forum.biodiversitylibrary.org/t/bhl-worksh...forum.biodiversitylibrary.orgBHL Workshop at TDWG 2026 feedbackYesterday @bhl_nicole and I ran a workshop on “future interfaces for BHL” at the TDWG 2026 in Oslo. The workshop was “hands on” with live demos of various tools that I’ve posted here, such as the BHL ... 0117
Reposted by TaxonWorksFlyBase @flybase.bsky.social · 18/09/2026New in FB2026_03! We have launched a beta release of #JBrowse2. All the data tracks you know and love in JBrowse are included in JBrowse2. The older JBrowse will continue to be available on FlyBase.org. 114
Reposted by TaxonWorksdeciphergenomics.bsky.social @deciphergenomics.bsky.social · 18/09/2026Are you a skilled and highly motivated Bioinformatics Developer looking for a new opportunity? Join the DECIPHER team - gain knowledge of clinical genomics and improved web development skills while creating tools to facilitate genomic medicine. embl.wd103.myworkdayjobs.com/EMBL/job/Hin... 124
Reposted by TaxonWorksKen-ichi Ueda @kueda.net · 19/09/2026Finally restored upstream and downstream visualization of waterways in underfoot.rocks, using the National Hydrography Database. 021
TaxonWorks @taxonworks.bsky.social · 19/09/2026Sometime tomorrow a big dataset, decades old, on some of the most economically important insects worldwide, will finish its migration to TaxonWorks, its curators are excited. Welcome ScaleNet, to your place beside the Universal Chalcidoidea Database, home of your mortal enemies. Fun shall be had. 0104
TaxonWorks @taxonworks.bsky.social · 19/09/2026The Species File Group will have a big presence at #TDWG2026 in Oslo, should be a wonderful time. Should be lots of opprotunities for discussions and on-the spot demos if folks are interested. Track Debbie or Matt down! 030
TaxonWorks @taxonworks.bsky.social · 16/09/2026The Species File Group is happy to announce a new project, unifying smaller efforts that have been ongoing internally for the last decade plus. The Miscellaneous Insect Species File is available at misc.speciesfile.org. For all of you that love the fringe insects, this resource is for you!misc.speciesfile.orgMiscellaneous Insecta Species FileMiscellaneous Insecta Species File is a comprehensive source of knowledge for the following extant insect groups: Archaeognatha (Microcoryphia), Coleorrhyncha, Embioptera, Notoptera (Grylloblattodea a... 030
Reposted by TaxonWorkstdwg.org @tdwg.org · 16/09/2026Please remember, this Monday, 21 September Ramona Walls will present “From biodiversity data to knowledge in the age of AI: Where do ontologies and standards fit?” at #TDWG2026 plenary 🔗 tdwg.link/keynote-ramona #AIReadyData #Biodiversity #keynote #plenary 032
Reposted by TaxonWorksThe Global Soil Biodiversity Initiative @thegsbi.bsky.social · 16/09/2026We’re thrilled to relaunch the GSBI website! 🍄 Our new look includes an updated website, our new logo, and refreshed information about who we are, what we do, and where we’re headed. 🌎 www.globalsoilbiodiversity.org #SoilBiodiversity #LivingSoils #SoilScienceglobalsoilbiodiversity.orgGlobal Soil Biodiversity Initiative 063
Reposted by TaxonWorksNicole Kearney @nicolekearney.bsky.social · 16/09/2026I’m delighted that @biodivlibrary.bsky.social will have a strong presence at #TDWG2026 in Oslo next week. I’ll be speaking in the mini-keynote session and hosting both our dedicated BHL symposium and (with @rdmpage.bsky.social) a hands-on BHL workshop. Hope to see you there! 🧪 📖 🌱 🌏 🔗 @tdwg.org 083
Reposted by TaxonWorksNature Reviews Genetics @natrevgenet.nature.com · 09/09/2026ICYMI: New online! Species-dense genomics through natural history collectionsdlvr.itSpecies-dense genomics through natural history collectionsNature Reviews Genetics, Published online: 02 September 2026; doi:10.1038/s41576-026-01011-8Large-scale genome initiatives are transforming biodiversity genomics, but genomes remain taxonomically sparse and difficult to compare across species. Kapli and colleagues argue that natural history collections should play a central role in building species-dense genomic resources, creating the foundation needed for comparative and predictive biodiversity genomics. 036
Reposted by TaxonWorksBF Francis Ouellette @bffo.bsky.social · 01/09/2026From Greg Wilson in arXiv | Twelve Quick Tips for Managing IT Disasters in Small Research Software Teams | #Informatics #OpenScience #Research #IT #DisastersPlanning #NotYetAPLOSCBQT | 🖥️🧪🔥🔓 ⬇️ arxiv.org/abs/2608.27196arxiv.orgTwelve Quick Tips for Managing IT Disasters in Small Research Software TeamsIn 2025, the US government launched an unprecedented series of attacks on its own scientific research groups. A year later GitHub dropped below 90% availability for the first time, while wildfires in ... 076
Reposted by TaxonWorksPablo Castro Sánchez-Bermejo @castretis.bsky.social · 11/09/2026In our new preprint we propose a way to measure and partition diversity by working directly on the distributions. If you wanna try this with your own data, we created functions for calculating diversity, partitioning it and visualizing distributions 📈 Check the functions: doi.org/10.5281/zeno... 0117
Reposted by TaxonWorksOpen science lab for biodiversity @oscibio.inbo.be · 10/09/2026📦 We just released a new version (1.0.0) of our R package {camtraptor}, which you can use to explore & visualize camera trap datasets. 📸🦌 This long-awaited release supports Camtrap DP v1.0 and offers a step-by-step exploration workflow with new functions. #rstats 👉 oscibio.inbo.be/blog/camtrap...oscibio.inbo.becamtraptor 1.0.0We released a new version of our R package camtraptor. 054
Reposted by TaxonWorksDavid Maddison @bembidion.bsky.social · 08/09/2026The Tree of Life Web Project is back online! tolweb.org Thanks to Travis Wheeler (@wheelerlab.org), Danny Mandel, and Andrew Lenards, the original programmers for ToLWeb, for retooling the code to work on a modern OS! It is hard for me to believe it lives again.tolweb.orgTree of Life Web Project 39745
Reposted by TaxonWorksEarth BioGenome Project 🌍 @ebpgenome.bsky.social · 08/09/2026🐝 More than 1 million insect species have been described. Millions more may still be out there. Now imagine trying to sequence them. 🧬 From tiny amounts of DNA to wildly different genomes, insects present some of biodiversity genomics’ biggest challenges. #EarthBioGenomeProject #Insects #Genomics 13913
Reposted by TaxonWorksRob Waterhouse @rmwaterhouse.bsky.social · 06/09/2026How can Digital Sequence Information (DSI) databases remain open, sustainable, and globally connected while supporting benefit-sharing from the use of DSI on genetic resources? www.nature.com/articles/s41...nature.comHow can biological databases support the new UN mechanism for benefit-sharing from digital sequence information? - Scientific DataScientific Data - How can biological databases support the new UN mechanism for benefit-sharing from digital sequence information? 002
Reposted by TaxonWorksWilliam B. Ludt, PhD @planet-of-fishes.bsky.social · 31/08/2026We're hiring a Curator of Marine Invertebrates either at the Assistant or Associate level. Please spread the word to anyone you know who might be interested. Applications due October 15th! workforcenow.adp.com/mascsr/defau...workforcenow.adp.comRecruitment 01422
Reposted by TaxonWorksRod Page @rdmpage.bsky.social · 02/09/2026Job at @nhm-london.bsky.social "We are seeking an experienced Data Scientist for a 12-month project to develop an AI-powered knowledge extraction and discovery platform for the Biodiversity Heritage Library @biodivlibrary.bsky.social ) jobs.nhm.ac.uk/Job/JobDetai...jobs.nhm.ac.ukData Scientist - AI for BHL:South Kensington 023
Reposted by TaxonWorksCasey Dunn @caseywdunn.bsky.social · 25/08/2026My new book, Phylogenetic Biology, is now published. Available online for free at dunnlab.org/phylogenetic... . Physical copies can be purchased at shop.lightningsource.com/b/085?params... or your favorite bookstore. 12319161
Reposted by TaxonWorksDavid Shorthouse @dshorthouse.bsky.social · 22/08/2026Working on this today but am too easily distracted by maps and canoe routes. Assuming I can focus my energies, come join me and the iDigBio community next week as I take a look at what's happened in 6 years of running Bionomia off the side of my desk. 021
Reposted by TaxonWorksMarianne Alleyne @cotesia.bsky.social · 15/08/2026My Department at the University of Illinois at Urbana-Champaign invites applications from entomologists with research portfolios in which INSECT BIODIVERSITY LOSS is a key element (at the assistant professor level). illinois.csod.com/ux/ats/caree... 18391
Reposted by TaxonWorksGalaxy Project @galaxyproject.bsky.social · 13/08/2026The 2nd Galaxy Tool Development Workshop! Join us to learn how to build and publish your own tools for Galaxy; led by experienced Galaxy devs 📍 Dept of Comp Sci, Uni of Freiburg 📅 2026-10-07 🔗 galaxyproject.org/events/2026-10-07… #UseGalaxy #EOSC #EuroScienceGatewaygalaxyproject.orgThe 2nd Galaxy Tool Development Workshop - Now Open to the wider Community!Join us in Freiburg to learn how to build, test, and publish your own tools for the Galaxy platform - hands-on, beginner-friendly, and led by experienced Galaxy developers 034
Reposted by TaxonWorksAlliance of Genome Resources @alliancegenome.bsky.social · 12/08/2026Looking for model organism resources to follow on Bluesky? Here's a starter pack for you! go.bsky.app/Npxsd7h 01517
Reposted by TaxonWorks🍁 Alex Smith 🍁 @alexsmithants.bsky.social · 10/08/2026🧪 🪰 🐜🪲🐞🦗🐛🦋🪳🦟 We analysed 3.78 million DNA barcodes from 152,891 Costa Rican insect species. Our results reveal limited community overlap across ecosystems, suggesting unique species assemblages in each life zone. doi.org/10.1139/gen-... @gdfcf.bsky.social @rpuschen.bsky.social 🧵 73719
Reposted by TaxonWorksRudolf Meier @rudolf-meier.bsky.social · 09/08/2026Five years back in Berlin #4a: Finding the small and mighty Most species are <5 mm. But small ≠ unimportant: ants outweigh all wild birds + mammals and spiders eat as much prey as humans meat/fish: ~400–800 Mt per /lyear. Meet EntoSieve for size sorting onlinelibrary.wiley.com/doi/10.1111/... 02713
Reposted by TaxonWorksEarth BioGenome Project 🌍 @ebpgenome.bsky.social · 05/08/2026🧬 How do we scale biodiversity genomics? In the latest issue of EBP Life, Dr Caroline Howard shares how the Tree of Life Programme is building the infrastructure needed to produce reference genomes at scale. 📖 tinyurl.com/EBPLife #EarthBioGenomeProject #BiodiversityGenomics #Genomics #TreeOfLife 1287
TaxonWorks @taxonworks.bsky.social · 05/08/2026A big release today, 0.64.0, changelog is at github.com/SpeciesFileG...github.comRelease Version 0.64.0 release · SpeciesFileGroup/taxonworksAdded Assigning OTU to taxon name task #130 ProjectOrganization model, link projects to org/depiction metadata #5027 Radial annotator: Add pagination to citations slice #4964 In the TaxonName verb... 000
Reposted by TaxonWorksEntomological Collections Network @entcollnet.bsky.social · 01/08/2026Do you work with insect collections? Yes?! Then we hope to see you at #ECN2026! 🪲 When: November Friday 6 - Saturday 7, 2026 Where: Columbus Hilton Downtown hotel, Ohio That’s right folks, we’re trialling something new and starting a day earlier than usual. We really hope you can join us! 1156
Reposted by TaxonWorksNatural History Collections and Museomics @nhcm.pensoft.net · 03/08/2026🏛️ In the following article, an opportunity for media-based storytelling to become a prominent application of natural history museum research is proposed, following a field-wide survey revealing that these stories are underrepresented on institutional social media: doi.org/10.3897/nhcm.3.176227 063
Reposted by TaxonWorksAlex Wild @alexwild.bsky.social · 01/08/2026I started using AI tools because an awful lot of people in academia are using it, my students will certainly be using it, and while I hate AI for so many reasons, I cannot in good conscience just dismiss the whole AI thing based on vibes. I need to know what it is doing, and how to use it. 3687
Reposted by TaxonWorksCarl T. Bergstrom @carlbergstrom.com · 21/07/20261. We—@eduede.bsky.social, @mjcrockett.bsky.social, Kevin Gross, and I—have a new preprint on the arXiv today, based on ideas that emerged during an @sfiscience.bsky.social workshop in November 2024: The unintended consequences of large language models as a labor-augmenting technology in science.arxiv.orgThe unintended consequences of large language models as a labor-augmenting technology in scienceAs a labor-augmenting technology, large language models (LLMs) have the potential to accelerate scientific activity across the research pipeline. But even if LLMs perform on par with human experts at ... 10837339
Reposted by TaxonWorksMatt Bertone @bertonemyia.bsky.social · 30/07/2026Be a dipterist. Be in Costa Rica for #FlySchool2026. See a muscoid #fly perching on a leaf. Tell student so they can collect it. Success!! Wait a minute 🤔 That's not a fly, but weevil mimicking one! This was so convincing, even rapidly moving & poking its wings out 🥰 #Curculionidae: cf. #Mnemynurus 522959
Reposted by TaxonWorksProsanta Chakrabarty @prosanta.bsky.social · 29/07/2026From collections to conservation: the indispensable role of natural history museums The IUCN Species Survival Commission has published a Position Statement on the vital role of biological collections in biodiversity conservation iucn.org/news/202607/...iucn.orgFrom collections to conservation: the indispensable role of natural history museumsThe IUCN Species Survival Commission has published a Position Statement on the vital role of biological collections in biodiversity conservation: a formal acknowledgement that natural history museums,... 012568
Reposted by TaxonWorksWayne Maddison @waynemaddison.bsky.social · 25/07/2026A old-timer's concern about science as a chronic social medium, leading to the advice to spend time alone with nature and ideas. waynemaddison.wordpress.com/2026/07/25/s...waynemaddison.wordpress.comScience like no one is watchingI grew up largely unwatched. As children, David and I would go out and play unsupervised, free-range. We would go down to the ravine to explore nature. It was fun, but more than that, I think it wa… 11711
Reposted by TaxonWorksDr Craig R McClain @drcraigmc.bsky.social · 24/07/2026Thrilled to share our #NSF award is official: we're heading to the abyssal Pacific to map deep-sea biodiversity using eDNA and ROV push coring. 16 stations, 1,024 cores, one incredible cruise. Huge thanks to co-PI @hollybik.bsky.social for leading this. 🧪 #marinelife 59612
Reposted by TaxonWorksDigital Naturalism Laboratories @dinalab.bsky.social · 24/07/2026At the big Moth event tonight at @amnh.org people were asking about the awesome art by @fievelw.bsky.social on display! Check out #YearoftheMoth for all the awesome art from the Moth Challenge! 182
Reposted by TaxonWorksM. Brent Hawkins @homeobox.bsky.social · 23/07/2026I am excited to open my lab at @ibioillinois.bsky.social in Spring 2027! We will use zebrafish & other fishy friends to reveal the genetic basis of large scale changes in the vertebrate body plan, and how this impacts both human health and evolution. Join me at UIUC! 🧬🧫🔬 www.hawkinslaboratory.com 1812733
Reposted by TaxonWorksRob Waterhouse @rmwaterhouse.bsky.social · 23/07/2026Realising #FAIR’s promise requires sustained investment in the infrastructures that organise, standardise, and curate #data: deposition databases and knowledgebases. www.nature.com/articles/s41...nature.comThe missing link in FAIR data policy: biodata resources in life sciences - Scientific DataIn the life sciences, FAIR principles have reshaped research policy, but their implementation still relies largely on individual researchers – many of whom lack the expertise or support needed to make... 062
Reposted by TaxonWorksJess Awad @parasitoidrex.bsky.social · 21/07/2026It was a pleasure to work with @nathanjaybaker.bsky.social and @swarmofthoughts.bsky.social on this long-term insect time-series. The megadiversity of #DarkTaxa is a serious blind spot for #biodiversity monitoring - by focusing on well-known groups, we neglect the vast majority of species. 🧪🦟🪰 1157
Reposted by TaxonWorksJoint Genome Institute @jgi.doe.gov · 22/07/2026Check out Genome Insider, the JGI’s podcast. Hear directly from users about how the JGI supports powering our future. Listen and follow on Apple, Spotify or wherever you find podcasts. 🖥️ 🧬 More: jointgeno.me/GenomeInsider jointgeno.meGenome Insider | Joint Genome InstituteOur podcast features JGI users discovering the expertise encoded in our environment. 054
Reposted by TaxonWorksCentre for Biodiversity Genomics @cbg-uofg.bsky.social · 20/07/2026 Our DNA library is made possible thanks to the support of our funding partners. Learn more about our funding partner, Genome Canada: 🔗https://genomecanada.ca/nserc-crsng.canada.caCanada.caThe Natural Sciences and Engineering Research Council of Canada (NSERC), Canada's federal funding agency for university-based research and student training in natural sciences and engineering. It's… 072
TaxonWorks @taxonworks.bsky.social · 22/07/2026Some of us think TaxonWorks is pretty sweet, we might be biased. #3Dprint your own TW cookie cutter, model at www.thingiverse.com/thing:4536552. Cutter, and cookies, by #UI wiz José. As lore, our logo originated_from a collab between SFG and Pixo (pixotech.com), nearly a decade ago. 000
Reposted by TaxonWorksJack Ashby @jackdashby.bsky.social · 20/07/2026🚨 #MUSEUMJOBS KLAXON🚨 We're looking for a Senior Digitiser and two Digitisers to work across @zoologymuseum.bsky.social & @camplantsci.bsky.social to help create biodiversity data for the researchers who need it, through #DiSSCoUK. 1. www.cam.ac.uk/jobs/senior-... 2. www.cam.ac.uk/jobs/digitis... 15052
Reposted by TaxonWorkstdwg.org @tdwg.org · 19/07/2026Early bird 🦜discount 💵 for #TDWG2026 in #Oslo finishes in less than 48 hours on 21 July Hurry up 🏃🏾♀️ this is your last chance to secure discount tickets 🎟️! All presenting authors must be registered. More info: 🔗 tdwg.link/conf-registr... 001