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Stephen Jackson

@stephenjackson.bsky.social
563 followers 550 following 30 posts

Microbiologist. University College Cork. www.ucc.ie/en/microbiology marblesproject.eu More or less inactive here just now, busy watching the funeral pyre of twitter. Personal account, views and opinions very much my own.

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Stephen Jackson @stephenjackson.bsky.social · 31/08/2026
Our recent review of the fascinating 'whiskey fungus' (Baudoinia spp.) gets a mention in this article. theconversation.com/a-black-fung... You can find our review here: www.sciencedirect.com/science/arti...
theconversation.com
A black fungus is thriving in the midst of Ireland’s whiskey boom – we need to know more about it
The fungus appears to feed on the airborne alcohol vapours produced during whiskey maturation.
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Stephen Jackson @stephenjackson.bsky.social · 16/08/2026
I was enjoying Project Hail Mary until he didn't balance the centrifuge.
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Stephen Jackson @stephenjackson.bsky.social · 05/08/2026
Delighted to share our latest publication on the extremophilic fungus 'Whiskey Black' or 'Angel's Share' (i.e. Baudoinia spp.) that grows on ethanol vapours around distilleries and whiskey maturation warehouses. www.sciencedirect.com/science/arti...
sciencedirect.com
Comparative genomics sheds new light on the microbiology of the whiskey fungus Baudoinia
Baudoinia compniacensis is a melanized saprobic fungus that causes blackening of surfaces in the vicinity of spirit maturation warehouses, commercial …
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Stephen Jackson @stephenjackson.bsky.social · 08/05/2026
Beautiful deep-sea fungi, isolated from the marine sponge Stelletta normani, sampled from a depth of ~750m.
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Stephen Jackson @stephenjackson.bsky.social · 28/02/2026
🎵Come you masters of war You that build the big guns You that build the death planes You that build all the bombs You that hide behind walls You that hide behind desks I just want you to know I can see through your masks 🎵
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Ákos T Kovács @evolvedbiofilm.bsky.social · 22/02/2026
PhD position with Natalia Tschowri (@unihannover.bsky.social) and Daniel Rozen (@unileiden.bsky.social @leidenscience.bsky.social) within @spp2389.bsky.social program Regulation and Evolution of Bacterial Multicellularity Application deadline until 15 March 2026 #PhDposition
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Stephen Jackson @stephenjackson.bsky.social · 14/01/2026
R.I.P. Seán Ó'Sé. A Cork legend, an extremely genial man and my primary school Príomhoide and choir master for Feis Maitiu. Are their Dé go raibh a h-anam. www.rte.ie/news/regiona...
rte.ie
An Poc ar Buile singer Seán Ó Sé dies at age of 89
One of the country's best known Irish traditional singers Seán Ó Sé has died.
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Mitja M. Zdouc @mmzdouc.bsky.social · 13/01/2026
Marine #sponges are generally considered biosynthetic "hotspots" (e.g. Theonella) - but does this always hold true? In our newest study led by @stephenjackson.bsky.social we are looking at Inflatella pellicula's biosynthetic capacity - and our results are surprising doi.org/10.1099/mgen...
doi.org
New insights into the microbiome of the deep-sea sponge Inflatella pellicula and the secondary metabolic potential of metagenome-assembled genomes and the wider microbiome
Marine sponges are found in all of the world’s oceans, from the surface waters to the deepest abyssal zones. The marine sponge holobiont is a rich source of microbial and chemical diversity. Up to 63 ...
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Stephen Jackson @stephenjackson.bsky.social · 12/01/2026
Delighted to share our latest publication as part of the MARBLES Project describing the metagenome, microbiome and secondary metabolic potential of the deep-sea sponge Inflatella pellicula. @cleverflick.bsky.social @uccmicrobiology.bsky.social www.microbiologyresearch.org/content/jour...
microbiologyresearch.org
New insights into the microbiome of the deep-sea sponge Inflatella pellicula and the secondary metabolic potential of metagenome-assembled genomes and the wider microbiome
Marine sponges are found in all of the world’s oceans, from the surface waters to the deepest abyssal zones. The marine sponge holobiont is a rich source of microbial and chemical diversity. Up to 63 ...
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Stephen Jackson @stephenjackson.bsky.social · 07/10/2025
New most treasured possession. He's Here He's There, Collector's Edition (132 of 857) signed biography of my all-time footballing hero, John Wark. Written with Neil Prentice. @ipswichtown.bsky.social
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Stephen Jackson @stephenjackson.bsky.social · 07/10/2025
Magical day at Portman Road on Sunday, ending 16 years of hurt with a comprehensive victory over the old enemy. @ipswichtown.bsky.social I enjoyed that @matthutchings.bsky.social 😜
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Stephen Jackson @stephenjackson.bsky.social · 25/09/2025
I'm pleased to announce that I will guest edit a new #MarineDrugs Special Issue, titled 'Enzymes Derived From Marine Sources". Submission details can be found here: www.mdpi.com/journal/mari...
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Stephen Jackson @stephenjackson.bsky.social · 19/09/2025
Incredibly proud of this work. International collaborations and a multi-disciplinary effort to discover and describe bioactive compounds from a marine Streptomyces sp. isolate inhibiting the growth of a fish pathogen. www.mdpi.com/1660-3397/23...
mdpi.com
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Ronan McCarthy @ronanmccarthy.bsky.social · 08/01/2025
We have a fully funded PhD studentship to work on engineering bacteria to degrade food associated plastic waste #microsky Deadline: Feb 3rd www.findaphd.com/phds/project...
findaphd.com
PhD Project at Brunel University, London: Engineering Bacteria for Enhanced Degradation of Food-Associated Plastic Waste at University of Reading on FindAPhD.com
PhD Project - PhD Project at Brunel University, London: Engineering Bacteria for Enhanced Degradation of Food-Associated Plastic Waste at University of Reading, listed on FindAPhD.com
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Professor Andrew J Roe @drandyjroe.bsky.social · 23/11/2024
Fully funded PhD available to work with me and the fab @paulhoskisson.bsky.social and @rebeccamchugh.bsky.social on the aurodox story- www.gla.ac.uk/postgraduate... 💊🦠🧫
gla.ac.uk
University of Glasgow - Postgraduate study - Centres for Doctoral Training - NorthWest Biosciences - Our Projects - Understanding Pathogens, from Molecules to Phenotypes - Ins and outs of disarming ...
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Stephen Jackson @stephenjackson.bsky.social · 18/11/2024
Beautiful
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Conor Feehily @sligomicrobe.bsky.social · 31/01/2024
**Deadline Extension** The application date for this PhD position is now February 14th. Still time for you to apply. #microsky
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Marnix Medema @marnixmedema.bsky.social · 22/01/2024
INVITATION We are starting a new round of online community annotathons to populate v4.0 of the MIBiG repository with high-quality data. If you have relevant expertise in natural product genomics or chemistry, please participate! Please register here: forms.gle/LJR9uRTCyLg7...
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microSCRUM @microscrum.bsky.social · 17/01/2024
Our School Seminar Series resumes on Thursday 25th January when Dr Stephen Jackson from Alan Dobson's group will talk about the metabolic potential of a deep sea sponge microbiome with a view to novel drug discovery. Note the new venue! (C_ELECT_L2)
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Detmer Sipkema @detmersipkema.bsky.social · 14/11/2023
6 days left to apply.... please RT
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Stephen Jackson @stephenjackson.bsky.social · 09/11/2023
Marine Drugs Special Issue: 𝑬𝒙𝒑𝒍𝒐𝒊𝒕𝒊𝒏𝒈 𝑴𝒂𝒓𝒊𝒏𝒆 ‘𝑶𝒎𝒊𝒄𝒔’ 𝑻𝒆𝒄𝒉𝒏𝒐𝒍𝒐𝒈𝒊𝒆𝒔 𝒇𝒐𝒓 𝒕𝒉𝒆 𝑩𝒊𝒐𝒅𝒊𝒔𝒄𝒐𝒗𝒆𝒓𝒚 𝒐𝒇 𝑴𝒂𝒓𝒊𝒏𝒆 𝑵𝒂𝒕𝒖𝒓𝒂𝒍 𝑷𝒓𝒐𝒅𝒖𝒄𝒕𝒔 Further information and submission link here: www.mdpi.com/journal/mari...
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microSCRUM @microscrum.bsky.social · 02/11/2023
Today's the day: Clodagh Carr will talk at our School Seminar Series and will tell us about Marine bacteria as a source of polyester-degrading enzymes with biocatalytic potential
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Aodh Q @aodhquinlivan.bsky.social · 25/10/2023
Published by Cork City Libraries as part of the excellent City Council Commemoration Programme, the launch of FIRST CITIZEN on 14 November is fast approaching. The book, co-written with John Ger O'Riordan, tells the fascinating story of Cork's longest-serving Lord Mayor, Seán French.
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Stephen Jackson @stephenjackson.bsky.social · 23/10/2023
Pattern or anomaly?
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Detmer Sipkema @detmersipkema.bsky.social · 23/10/2023
Hi all, I have a postdoc position (3 years) in my group on a very challenging topic: co-cultivation of sponge cells and bacterial symbionts. Looking for someone with experience with marine invertebrate cells AND bacteria. Thanks for sharing! www.wur.nl/en/vacancy/p...
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Aodh Q @aodhquinlivan.bsky.social · 22/10/2023
Issue 797 of 'The GW38 Gazette' is out now. Rest in peace to a legend of the game 😢.
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microSCRUM @microscrum.bsky.social · 18/10/2023
Great interview with our very own Professor Jens Walter , talking about the link between diet & disease & the central roles played by our gut microbiome! @ucc.bsky.social #UCC #SchoolOfMicrobiology #SEFS 𝐑𝐞𝐬𝐞𝐚𝐫𝐜𝐡 𝐭𝐨 𝐥𝐨𝐨𝐤 𝐚𝐭 𝐫𝐞𝐥𝐚𝐭𝐢𝐨𝐧𝐬𝐡𝐢𝐩 𝐛𝐞𝐭𝐰𝐞𝐞𝐧 𝐝𝐢𝐞𝐭 𝐚𝐧𝐝 𝐝𝐢𝐬𝐞𝐚𝐬𝐞 www.echolive.ie/corknews/ari...
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Stephen Jackson @stephenjackson.bsky.social · 18/10/2023
I know I'm old, and out of touch, but there has been biblical rain here for the last 26 hours and it's continuing, yet university students are walking and cycling to campus in GAA shorts!! Can anyone explain????
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Stephen Jackson @stephenjackson.bsky.social · 17/10/2023
A nice milestone, 2000 citations ☺️
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Conor Feehily @sligomicrobe.bsky.social · 16/10/2023
Merck currently have a 4 month lead in time for anaerocult pouches. Can anyone recommend an alternative for me? #slowsupplychain
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microSCRUM @microscrum.bsky.social · 14/10/2023
The next speaker in our School Seminar Series is Shona Uniacke-Lowe who will talk about biomining the deep-sea for new anti-microbials. Really looking forward to this!
MICROBIOLOGY SEMINAR SERIES
Ph.D. SPEAKER EVENT

Shona Uniacke-Lowe
University College Cork, Cork, Ireland
Supervisor: Paul Ross

Title: The antimicrobial potential of the deep-sea fish microbiome

Shona will present her work on the screening of bacterial isolates from the microbiomes of deep-sea fish for antimicrobials, with a particular focus on finding novel bacteriocins. The deep-sea is one of the largest ecological habitats on Earth, yet one of the least explored, and so has great potential as a source of novel antimicrobial metabolites.

Thursday 19th October
14:00-14:30
AL G30 - UCC
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antiSMASH @antismash.bsky.social · 13/10/2023
Hello BlueSky, is this thing on? The antiSMASH antismash.secondarymetabolites.org service has just landed.
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Paul Hoskisson 🧫 🦠🐸 @paulhoskisson.bsky.social · 23/08/2023
An amazing student I co-supervise with the equally brilliant Leighton Pritchard has recently posted this in @biorxivpreprint.bsky.social 16S rRNA phylogeny and clustering is not a reliable proxy for genome-based taxonomy in #Streptomyces www.biorxiv.org/content/10.1... - would love comments
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Stephen Jackson @stephenjackson.bsky.social · 11/10/2023
www.nature.com/articles/s41...
nature.com
Unraveling the functional dark matter through global metagenomics - Nature
A computational approach to generate reference-free protein families from the sequence space in metagenomes reveals an enormously diverse functional space.
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Dr Katherine Duncan @kateduncan.bsky.social · 05/10/2023
Our review - Antibiotics from rare actinomycetes, beyond the genus Streptomyces - is now online Thanks to coauthors @jonathanparra.bsky.social @ainsleybeaton1 @ryanfseipke @barriewilksjic @matthutchings.bsky.social and editors Toni Gabaldón & Luiz Carvalho for the invitation
sciencedirect.com
Antibiotics from rare actinomycetes, beyond the genus Streptomyces
Throughout the golden age of antibiotic discovery, Streptomyces have been unsurpassed for their ability to produce bioactive metabolites. Yet, this su…
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Ronan McCarthy @ronanmccarthy.bsky.social · 03/10/2023
Does rewiring bacteria to form more biofilm increase the efficency of plastic degrading enzymes? Short Answer: Yes Longer Answer: Check out our latest www.nature.com/articles/s41...
nature.com
Modulating biofilm can potentiate activity of novel plastic-degrading enzymes - npj Biofilms and Mic...
npj Biofilms and Microbiomes - Modulating biofilm can potentiate activity of novel plastic-degrading enzymes
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Matt Hutchings @handle.invalid · 02/10/2023
If you’re interested in Streptomyces and other filamentous actinomycete bacteria and their natural products please follow @actinobase.bsky.social, the social media account for our community led actinobase.org wiki.
actinobase.org
ActinoBase
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Matt Hutchings @handle.invalid · 29/09/2023
Anyone know any good methods for finding out which transcription factors bind to a piece of DNA? Old fashioned way is to stick the DNA of interest to a bead and wash cell extracts over it. Not very effective. Looking for in vivo and in vitro methods. Thanks
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Stephen Jackson @stephenjackson.bsky.social · 23/09/2023
Cool word cloud from my publications. Tool here: shiny.rcg.sfu.ca/u/rdmorin/pu... Thanks @paulhoskisson.bsky.social
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Adam Sharp @adamcsharp.bsky.social · 19/09/2023
I’ve only been on here for a matter of hours but already loving it and considering moving over full time (as the space baby continues to turn the other place to X-crement). If anybody feels like reskeeting (?) this to help me find old mutuals, I’d really appreciate it
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Stephen Jackson @stephenjackson.bsky.social · 14/09/2023
Janey Mac
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Stephen Jackson @stephenjackson.bsky.social · 14/09/2023
Hello Blue-sky. Behold, an artistic rendering of a Paenibacillus dendritiformis colony!
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