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Miguel Méndez Sandín

@sandinmm.eurosky.social
613 followers 362 following 30 posts

Understanding eukaryotic molecular diversity and evolution. Marie Skłodowska-Curie Postdoctoral Fellow @IBE_Barcelona @beaplab.bsky.social miguelmsandin.github.io thelifeofretaria.github.io Mastodon: @SandinMM@ecoevo.social

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Reposted by Miguel Méndez Sandín
Nicole Coots @nicolecoots.bsky.social · 18/09/2026
The International Society of Protistology is funding community initiatives like workshops and symposia! The deadline is soon (09/30) but the funding will also be available next year :-) Send to anyone that might benefit from this/plz retweet! #ProtistsonSky protistologists.org/call-for-app...
protistologists.org
Call for Applications: Community Initiative Support Fund - International Society of Protistologists
The International Society of Protistologists is an association of scientists devoted to research on single-celled eukaryotes, or protists. The ISOP promotes the presentation and discussion of new or i...
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Proceedings of the National Academy of Sciences @pnas.org · 28/07/2026
One of the most-viewed PNAS articles in the last week is “Environmental phylogenetics supports a steady diversification of crown eukaryotes starting from the mid-Proterozoic.” Explore the article here: ow.ly/5Lpf50Ztxar For more trending articles, visit ow.ly/AMo550Ztxas.
A five-panel figure includes a circular phylogenetic tree and four lineage-through-time graphs labeled A, B, C, D, and E.
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Miguel Méndez Sandín @sandinmm.eurosky.social · 17/07/2026
Apparently the "boring billion" was actually exciting! We provide molecular evidence of complex Mesoproterozoic eukaryotic communities. So happy to see this out 🥳 Thanks to @phoebefossil.bsky.social , Hélène Morlon & @fburki.bsky.social for a lovely collab! doi.org/10.1073/pnas...
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Vasily Zlatogursky @zlatogursky.bsky.social · 29/06/2026
1/11 🤩Sooooo happy to see this work on a new new group #algae. Looks like #centrohelids - predatory ancient eukaryotic lineage sometimes harbor vertically-inherited plastids from #dictyochophytes. Amazing work, @annewalraven.bsky.social, glad to be on board! More below:
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Anne Walraven @annewalraven.bsky.social · 27/06/2026
Very excited that the preprint of the main paper of my PhD is now out! We show that Meringosphaera is the first centrohelid with permanent plastids: doi.org/10.64898/202... @zlatogursky.bsky.social, @pjkeelinglab.bsky.social, prof. Rachel A. Foster, and @fburki.bsky.social #protistsonsky
doi.org
Single cell genomics and fluorescence microscopy suggest a permanent plastid in a marine centrohelid
Photosynthetic organelles (plastids), which originated via primary endosymbiosis between an Archaeplastida ancestor and cyanobacteria, have shaped the Earth's oxygen-rich atmosphere and spread across ...
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Marie Walde 🌊🦠🔬 @mariescopy.bsky.social · 05/06/2026
Hacking spirit in Roscoff during our "Smart DIY Microscopy for Marine Biology" inspired by #MIFOBIO last year. We jointly assembled new #EnderScope systems for marine research. 🌊🔬💻 Big thanks to 💙EnderTeam 💙@embrc-france.bsky.social 💙@gdrimabio.bsky.social 💙@sbroscoff.bsky.social
A group of people listening to a presentationAn EnderScope with a multiwell dish containing small bits of different algaeAn EnderScope next to a big screen showing python codeA group of scientists visiting the historic aquarium of the Station Biologique de Roscoff
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John Burns @burnsajohn.bsky.social · 30/05/2026
My friends, thank you. With energy, vision, and courage you are forging a path into the future for our favorite protists and the community that exists around them. Bravo 👏 👏 👏. I highly recommend the paper (and seminars!).
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Nicole Coots @nicolecoots.bsky.social · 29/05/2026
it has been a real pleasure to co-run the Life of Retaria with such a lovely group of organizers 💕Happy two years of the Life of Retaria Seminar Series!!!! 🎉 it feels right that our paper should come out around the anniversary!
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Miguel Méndez Sandín @sandinmm.eurosky.social · 29/05/2026
The first paper from #theLifeOfRetaria is out! doi.org/10.1002/bies... This was a very fun and enriching process, as it has been the last 2 years of our Seminar Series 🤩 #protistsonsky
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Megan Sorensen @messorensen.bsky.social · 30/04/2026
Interested in working on the evolution of photosynthetic endosymbioses? Come join us! I have 2 open positions in my new group @cemess.bsky.social in Vienna 3yr postdoc info: tinyurl.com/4emkjpn4 4yr PhD info: tinyurl.com/mtxmsjpy Apply by 1st June! Please share/repost #Protists #Symbiosis #PhD
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Pierre Ramond @pierreramond.bsky.social · 23/04/2026
If there's data there's a story to tell 💾📜 In this paper we study the rate and origin of microbial community 🦠 turnover 🛞 at various spatial 🌍 and temporal 🗓️ scales in the ecosystems of the Wadden & North Seas 💙💚🤎🌊 From my time with people at @niozsearesearch.bsky.social doi.org/10.1111/1462...
doi.org
Community Turnover and Connectivity at Two Study Sites in the North and Wadden Seas: Dynamics From Hours to Seasons
We sampled the microbiomes of the two sites in the ecosystems of the Wadden and the North Seas. Microbiome composition changed across ecosystems and seasons but still demonstrated similar functional ....
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Miguel Méndez Sandín @sandinmm.eurosky.social · 17/04/2026
Hot off the press! We are sharing oligoN-design, an open-source tool to find specific probes and primers from large molecular datasets, without relying on specific databases, alignments or phylogenetic trees. @mariescopy.bsky.social @rmassanam.bsky.social @beaplab.bsky.social doi.org/10.1111/1755...
doi.org
OligoN‐Design: A Simple and Versatile Tool to Design Specific Probes and Primers From Large Heterogeneous Datasets
High-throughput environmental DNA sequencing has ushered ecological and evolutionary studies into the big data era. With thousands to millions of DNA sequences, designing taxon-specific oligonucleoti...
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Luciana Santoferrara @lusantof.bsky.social · 27/03/2026
Our new article on #protist global distributions combining the #Mixoplankton and #metaPR2 databases with newly revised functional annotations. rdcu.be/fanlx
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Olaya Rendueles @olayarendueles.bsky.social · 15/01/2026
My team at @cbitoulouse.bsky.social is recruiting a postdoc #bioinformatics with solid experience in metagenomic analyses. Interest in evolution, ecology & MGEs is important. The offer stands until the perfect candidate is found, and it could be you 🫵 🔁 🙏 #microSky #phagesky #UTIsky @cnrs.fr
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Operador Nuclear @operadornuclear.com · 14/01/2026
Llevo muchos años en esto y creo que es la mejor entrevista que he visto sobre el impacto real del accidente de Chernóbil. Una fascinante conversación con @gorizaola.bsky.social, zoólogo, investigador y divulgador, que ha trabajado varios años en la zona de exclusión. youtu.be/1fiJacjjW2s?...
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Miguel Méndez Sandín @sandinmm.eurosky.social · 15/12/2025
New preprint out! Using ~75k environmental OTUs + 77 fossil calibrations, we reconstructed a Proterozoic timeline of eukaryote evolution. Our results show crown eukaryotes were already diversifying >1.6 Ga, long before the first undisputed fossils (~1.05 Ga). 🔗 DOI: www.biorxiv.org/content/10.6...
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Miguel Méndez Sandín @sandinmm.eurosky.social · 07/11/2025
Oligonucleotide design meets big data: We present oligoN-design, a simple, reproducible and versatile open-source tool to design specific primers and probes directly from large environmental DNA datasets. 🔗 DOI: doi.org/10.1101/2025... 👉 github.com/MiguelMSandi...
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Peer Community Journal @peercomjournal.bsky.social · 29/05/2025
Now published in Peer Community Journal, #ecology section: On the quest for novelty in ecology
buff.ly
On the quest for novelty in ecology
Ottaviani, Gianluigi1, 2, 3, 4  ; Martínez, Alejandro5 ; Petit Bon, Matteo1, 6 ; Mammola, Stefano4, 5, 7 1 Institute of Botany, The Czech Academy of Sciences, Třeboñ, Czech Republic 2 Department of…
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Josef Uyeda @pseudacris.bsky.social · 21/05/2025
Unsolicited listicle: My list of the most criminally underused/underappreciated phylogenetic comparative methods. Note, I am not involved in ANY of these methods; but I see them as things people are often asking of comparative data but have been surprised at how infrequently they have been cited.
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Julie Meilland @juliemeilland.bsky.social · 12/05/2025
With the « Life of Retaria » we do podcasts! Listen to the first one during which we interviewed @fabnot.bsky.social #protistsonsky
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Nicole Coots @nicolecoots.bsky.social · 12/05/2025
My friends in the Life of Retaria group decided to make a podcast! In the first episode, they interview @fabnot.bsky.social about his journey as a scientist. I loved the first episode, hope you do too! @juliemeilland.bsky.social @sandinmm.bsky.social et al. thelifeofretaria.github.io/podcast.html
thelifeofretaria.github.io
The Life of Retaria Experience
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Miguel Méndez Sandín @sandinmm.eurosky.social · 08/05/2025
Despite 150+ years of Radiolaria diversity research, we have just scratched the surface. Nearly half of Radiolaria diversity might be naked hiding in plain sight! We unveiled the diversity and evolution of Radiolaria beyond "the stars of the ocean" doi.org/10.1016/j.cu...
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Johan Renaudie @plannapus.bsky.social · 07/05/2025
Now published online in Current Biology! www.cell.com/current-biol...
cell.com
Extant diversity, biogeography, and evolutionary history of Radiolaria
Sandin et al. reveal a vast, overlooked molecular diversity of Radiolaria, likely skeleton-less, contrasting the traditional view of their star-shaped skeleton. Such comprehensive Radiolaria diversity...
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Miguel Méndez Sandín @sandinmm.eurosky.social · 05/05/2025
Why do some planktonic protists develop a gelatinous matrix? We suggest that this original adaptation is a strategy to cope with ocean oligotrophy: doi.org/10.1111/1462... Led by @n-llopis-m.bsky.social, and thanks to all co-authors, I'm very happy to finally see it out! #protistsonsky
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The PR2 database @pr2-database.bsky.social · 03/04/2025
Announcing the new release of the PR2 database, version 5.1. pr2-database.org/post/news/20... Very big thanks to all the contributors: @fonamental.bsky.social @ambonacolta.bsky.social @krabberod.bsky.social and more... A few highlights:
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Daniel Brady Mills @danbmills.bsky.social · 19/02/2025
Adding planktonic algae to anoxic marine sediments promotes the anaerobic growth of phagotrophic #eukaryotes. The #Neoproterozoic Rise of Algae may have similarly promoted benthic phagotrophs, directing carbon, energy, and nutrients to early animals. #ProtistsOnSky www.science.org/doi/10.1126/...
science.org
The Rise of Algae promoted eukaryote predation in the Neoproterozoic benthos
The rise of marine algae stimulated microbial predation at the seafloor, rerouting carbon and energy to the earliest animals.
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Micah Dunthorn @micahdunthorn.bsky.social · 23/01/2025
Registration is now open for the ForBio/UiO course “Bioinformatics for environmental DNA sequencing” @biovitenskap.bsky.social @drhyfe.bsky.social @krabberod.bsky.social @ramalok.bsky.social www.forbio.uio.no/events/cours...
forbio.uio.no
ForBio and UiO/IBV course: Bioinformatics for environmental DNA sequencing - ForBio
Read this story on the University of Oslo's website.
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Marie Walde 🌊🦠🔬 @mariescopy.bsky.social · 22/01/2025
I feel this might be a good week to re-post this. Data is power.
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Miguel Méndez Sandín @sandinmm.eurosky.social · 10/01/2025
Next Monday 13 we have the 6th session of The Life of Retaria Seminar Series! Join us at 08h00 (CET) and discover symbiosis in these wonderful protists with Caroline Juery and @filiphusnik.bsky.social Check it out: thelifeofretaria.github.io #radiolaria #foraminifera #theLifeOfRetaria #protistsonsky
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MBARI @mbarinews.bsky.social · 19/12/2024
Plankton store carbon and play an important role in our climate. In a new opinion piece, @n-llopis-m.bsky.social—a @sbroscoff.bsky.social Marie Sklodowska Curie postdoctoral fellow at MBARI—shares what we can learn from diatoms. Learn more: www.nature.com/articles/s41... @naturegeosci.bsky.social
nature.com
Polar diatoms fade in the twilight zone - Nature Geoscience
The intense, efficient transfer of organic carbon from the surface to the deep Southern Ocean make it a key component of the global carbon cycle. Observations show that this process isn’t always drive...
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Daniel Vaulot @daniel-vaulot.bsky.social · 10/12/2024
New preprint led by Ruben Gonzalez-Miguens for a new coi database that should be useful to annotate metabarcoding datasets with protists. www.biorxiv.org/content/10.1...
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Fabien Burki @fburki.bsky.social · 10/12/2024
I am looking for an ERC-funded postdoc to work on spatial proteomics of microalgae (red algae and glaucophytes). The ideal candidate will have experience with mass spec and data analysis (R), but above all a keen interest in broad eukaryote evolution and protists #protistsonsky (1/2)
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Ioana Brännström @ioanabrannstrom.bsky.social · 15/11/2024
JOB ALERT! A fully funded PhD opportunity awaits at Uppsala University, Sweden, focusing on the evolution and biology of lichen photobionts. The position will involved field work, molecular lab work and data analyses (from meta-omics to pop genetics). #PhDposition www.uu.se/en/about-uu/...
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Andrew Roger @andrewjroger.bsky.social · 25/11/2024
Reconstructing the last common ancestor of all eukaryotes: journals.plos.org/plosbiology/...
journals.plos.org
Reconstructing the last common ancestor of all eukaryotes
Understanding the origin of eukaryotic cells is one of the most difficult problems in all of biology. This Consensus View lays out guidelines to identify the gene repertoire of the Last Eukaryotic Com...
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Joseph W. Brown @josephwb.bsky.social · 19/10/2024
Annual reminder that PhyloPic is your free go-to source for organismal silhouettes for #Jack-o'-lantern designs phylopic.org @tmkeesey.bsky.social 🧪
phylopic.org
PhyloPic
PhyloPic is an open database of free silhouette images of animals, plants, and other life forms, available for reuse under Creative Commons licenses. Download silhouettes for use in educational materi...
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Marie Walde 🌊🦠🔬 @mariescopy.bsky.social · 18/11/2024
Interesting resource. 🇪🇺👩‍💻 I was only aware of a fraction of these services european-alternatives.eu/alternatives...
european-alternatives.eu
European alternatives for popular services | European Alternatives
We help you find European alternatives for digital service and products, like cloud services and SaaS products.
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Miguel Méndez Sandín @sandinmm.eurosky.social · 13/11/2024
A nice perspective about common misconceptions of speciation academic.oup.com/evolinnean/a...
academic.oup.com
Common misconceptions of speciation
Abstract. Speciation is a complex process that can unfold in many different ways. Speciation researchers sometimes simplify core principles in their writin
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Johan Renaudie @plannapus.bsky.social · 09/10/2024
Happy to have collaborated on this with Miguel! A new time-calibrated molecular phylogeny of radiolarians with insights on their hidden diversity 🧪
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Miguel Méndez Sandín @sandinmm.eurosky.social · 09/10/2024
Radiolaria are known for their elaborate and gorgeous skeletons, found all over our oceans. But what if I tell you that half of their diversity might be naked!? www.biorxiv.org/content/10.1...
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Max Berger @maxberger.bsky.social · 22/09/2024
Line go down
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Miguel Méndez Sandín @sandinmm.eurosky.social · 08/07/2024
It’s happening!!🎉 Today our second seminar of the Life of Retaria seminar series! Join us at 14h (CET) to dive deeper into the role of Forams and Rads in marine biogeochemical cycles! 🌊 Our presenters: Nielja Knetch & Manon Laget😍 Learn more and register here: docs.google.com/forms/d/e/1F...
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